Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G14180 357 / 6e-121 MPL1 Myzus persicae-induced lipase 1 (.1) AT2G15230 295 / 8e-97 ATLIP1 lipase 1 (.1) AT1G73920 100 / 2e-22 alpha/beta-Hydrolases superfamily protein (.1.2) AT1G18460 93 / 3e-20 alpha/beta-Hydrolases superfamily protein (.1) AT1G73750 42 / 0.0008 Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10015158 [exp] 598 / 0 AT5G14180 351 / 2e-118 Myzus persicae-induced lipase 1 (.1) Lus10031524 [exp] 575 / 0 AT5G14180 359 / 2e-121 Myzus persicae-induced lipase 1 (.1) Lus10015063 [exp] 500 / 8e-176 AT5G14180 224 / 1e-71 Myzus persicae-induced lipase 1 (.1) Lus10031523 [exp] 452 / 5e-158 AT5G14180 410 / 1e-141 Myzus persicae-induced lipase 1 (.1) Lus10015159 [exp] 450 / 3e-157 AT5G14180 409 / 2e-141 Myzus persicae-induced lipase 1 (.1) Lus10038401 [exp] 383 / 4e-131 AT5G14180 383 / 4e-131 Myzus persicae-induced lipase 1 (.1) Lus10038378 [exp] 378 / 1e-129 AT5G14180 377 / 2e-129 Myzus persicae-induced lipase 1 (.1) Lus10041571 [exp] 370 / 3e-125 AT5G14180 525 / 0.0 Myzus persicae-induced lipase 1 (.1) Lus10022349 [exp] 367 / 3e-124 AT5G14180 527 / 0.0 Myzus persicae-induced lipase 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G159800 [exp] 471 / 7e-166 AT5G14180 422 / 3e-146 Myzus persicae-induced lipase 1 (.1) Potri.014G159900 [exp] 470 / 3e-165 AT5G14180 421 / 9e-146 Myzus persicae-induced lipase 1 (.1) Potri.014G159700 [exp] 468 / 2e-164 AT5G14180 441 / 5e-154 Myzus persicae-induced lipase 1 (.1) Potri.001G332300 [exp] 368 / 2e-125 AT5G14180 533 / 0.0 Myzus persicae-induced lipase 1 (.1) Potri.009G094900 [exp] 301 / 4e-99 AT2G15230 564 / 0.0 lipase 1 (.1) Potri.017G069700 [exp] 295 / 7e-97 AT5G14180 374 / 4e-128 Myzus persicae-induced lipase 1 (.1) Potri.012G060600 [exp] 99 / 3e-22 AT1G73920 917 / 0.0 alpha/beta-Hydrolases superfamily protein (.1.2) Potri.012G053700 [exp] 44 / 0.0002 AT1G15060 505 / 4e-175 Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [flax] [poplar] AB_hydrolase PF04083 [flax] [poplar] Abhydro_lipase Partial alpha/beta-hydrolase lipase region
Representative CDS sequence Show only first row Show all	>Lus10023171 pacid=23170281 polypeptide=Lus10023171 locus=Lus10023171.g ID=Lus10023171.BGIv1.0 annot-version=v1.0 ATGCCTAATGCTAATCTACAGTCGGTTGCATCATTCGTCCTGGTTTGTGGGATGGTAGCTATGGTTGCTGCTGTATCGAATTCGGATATCGTCCCAAGTG CAAATTTCTCCTTGGCTGCTGCTGCTGCCTCTGTCAATGGTGTCTGCCGATCAGTGGTTGAGCCACTAGGCTATGGCTGCGTAGAACACAAGGTGACAAC AACAGACGGATACATCCTCAGCCTCCAGAGAATCGCGGGCAAATCCGGTGGCGACTCCAGAACCGGAAAACCCGTTCTATTACAGCATGGGTTGTTCATG GATGGAGTAACGTGGTTTCTGTTATCTCCAGGCCAGAATCTGGCATTCCTCATGGCAGATAACGGTTACGATGTCTGGGTTGTTAGTGGCCGTGGAACAC AATTTAGCCGCGACCATGTTTCGTACGGCCCGAATGACAAAACTTACTGGGATTGGACATGGGACGAACTGGCGGAATTCGATCTGCCTGCTACGGTTGG CTATATCCATGACCAGACAAAACGGAAGCTGCATTTTGTTGGACATTCTCAGGGAAATTTGCTGGCTCTTGCAGCAGTCTCCAAAGGCCATCTTCTGGAC AAGTTAGCATCACTTACTATGCTTTGCCCTGTTGCTTATATGCACCATATGTCCTCCCTCCTCATGAGAGGATCCATCAATCTCTTCTTCGCTGAGGAAT TTTATTGGCTGAATATCAAGGAATTTGATCCAAATGGGGGAGCTGCACAAAGGTTTCTTCAGAAAGTGTGCAAGCTGCCATTAGTGGACTGCAGCAACTT AATGACTGCACTTACAGGCAAGAATTGCTGTCTGAAACCTTCAGCGCTAGATTCGTTCCTAGTATACGAGCCCCAACCAACATCAACAAGGAACTTGATG CATCTTTCTCAGATGGTGAGACGAGGTACGACAACAATGTACGACTACGACAACGAGGAGGAGAACATGAAACACTATGGGCAGCCTAGTCCTCCGGTTT ACGACATGACGCAAATTCCAAGAGACTTGCCCATCTTCCTCACTTATGGAGGGACCGACGGTATAACTTCGGAGAAAGATGTGCAGATCTTGCTAGGGAC GATGAACAATCACGACGGAGACAAGATTGTGACTCAGTTTGTAGATAACTATGCTCATGCAGACTATGTCATGGCTTACAATGCTAGGCAGAAAGTTTAT GAACCTTTGCTTGCTTTTCTCAAACAGTACTGA
AA sequence Show only first row Show all	>Lus10023171 pacid=23170281 polypeptide=Lus10023171 locus=Lus10023171.g ID=Lus10023171.BGIv1.0 annot-version=v1.0 MPNANLQSVASFVLVCGMVAMVAAVSNSDIVPSANFSLAAAAASVNGVCRSVVEPLGYGCVEHKVTTTDGYILSLQRIAGKSGGDSRTGKPVLLQHGLFM DGVTWFLLSPGQNLAFLMADNGYDVWVVSGRGTQFSRDHVSYGPNDKTYWDWTWDELAEFDLPATVGYIHDQTKRKLHFVGHSQGNLLALAAVSKGHLLD KLASLTMLCPVAYMHHMSSLLMRGSINLFFAEEFYWLNIKEFDPNGGAAQRFLQKVCKLPLVDCSNLMTALTGKNCCLKPSALDSFLVYEPQPTSTRNLM HLSQMVRRGTTTMYDYDNEEENMKHYGQPSPPVYDMTQIPRDLPIFLTYGGTDGITSEKDVQILLGTMNNHDGDKIVTQFVDNYAHADYVMAYNARQKVY EPLLAFLKQY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G14180		MPL1	Myzus persicae-induced lipase ...		Lus10023171 [exp]	0	1
AT4G18210		ATPUP10	purine permease 10 (.1)		Lus10026130 [exp]	3.0	0.8549
AT4G09740		ATGH9B14	glycosyl hydrolase 9B14 (.1)		Lus10017525 [exp]	3.2	0.8173
AT4G22390			F-box associated ubiquitinatio...		Lus10030826 [exp]	4.6	0.8027
AT2G39300			unknown protein		Lus10019883 [exp]	7.9	0.8203
AT5G01700			Protein phosphatase 2C family ...		Lus10014231 [exp]	9.7	0.8434
AT1G13570			F-box/RNI-like superfamily pro...		Lus10028369 [exp]	12.2	0.7650
AT2G33530		SCPL46	serine carboxypeptidase-like 4...		Lus10040327 [exp]	14.0	0.8333
AT5G36228			nucleic acid binding;zinc ion ...		Lus10010788 [exp]	17.2	0.6999
AT4G26110		NAP1;1, ATNAP1;...	ARABIDOPSIS THALIANA NUCLEOSOM...		Lus10026197 [exp]	17.5	0.8419
AT1G24110			Peroxidase superfamily protein...		Lus10010716 [exp]	21.4	0.7681

Compare expression of checked genes

Lus10023171 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.