Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G15190 53 / 3e-08 Fasciclin-like arabinogalactan family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10015081 [exp] 249 / 2e-83 AT1G15190 108 / 4e-28 Fasciclin-like arabinogalactan family protein (.1) Lus10023801 [exp] 86 / 2e-19 AT1G15190 125 / 1e-33 Fasciclin-like arabinogalactan family protein (.1) Lus10003958 [exp] 85 / 4e-19 AT1G15190 129 / 1e-34 Fasciclin-like arabinogalactan family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G306800 [exp] 45 / 2e-05 AT1G15190 52 / 8e-08 Fasciclin-like arabinogalactan family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10023183 pacid=23170445 polypeptide=Lus10023183 locus=Lus10023183.g ID=Lus10023183.BGIv1.0 annot-version=v1.0 ATGGAGTCCTCCTCCTCCTCCAAGCAACTGTTTCTTGATCTTCCGATCGTCTTCCTCCTCCTCATCTCCACCGCCGGCTTCTTCTTCTCAAATCAGACGC CAGTGGAAGACCTCACTCTCTTGCCTCCTTCCGATTCCGCCCTATTCGGACTCGATTTGACGGCCGAATCCCCGGCGTTGTACCTGGCCACCCTCCGCCT CCACGTGGTCCCTTTCCGCATCACCGATTTCCGCAACAACGCATCTCTGCACACTCTTGTCCATTCCCGCCGCCGCCTTCACGTCGCCCAAAACAACAAC GGCGTCGTTTTTGTGGGGGGGGGGGGGGTCGTCTTCCCGCCTCTCTACTACCAGAGCAATGTCGCTGTCTATGCGCTACGAGGTATGCTTCCTCCCGACC GACTGGCCTCTCCCGCATCCAAACATAAGCTGGTTCCAGCGTTTCCTCCGGTGATGTGGAGCGATGTTTCTTTGCCACCGGCGGAAGTGGAATCCAACAA GCCAAGAAGATTCGTCCCTCCGACGACAGCAGAAAGTGTAAACGAATCAGGGGAGGATGAAACGGACTATCCGGAAGAGAAGGATGGGGAGGAGGAAAGT TACAGCGAGGATTACGCGATGCAGCAGAGCCATAGGGATTGA
AA sequence Show only first row Show all	>Lus10023183 pacid=23170445 polypeptide=Lus10023183 locus=Lus10023183.g ID=Lus10023183.BGIv1.0 annot-version=v1.0 MESSSSSKQLFLDLPIVFLLLISTAGFFFSNQTPVEDLTLLPPSDSALFGLDLTAESPALYLATLRLHVVPFRITDFRNNASLHTLVHSRRRLHVAQNNN GVVFVGGGGVVFPPLYYQSNVAVYALRGMLPPDRLASPASKHKLVPAFPPVMWSDVSLPPAEVESNKPRRFVPPTTAESVNESGEDETDYPEEKDGEEES YSEDYAMQQSHRD

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G15190			Fasciclin-like arabinogalactan...		Lus10023183 [exp]	0	1
AT5G48480			Lactoylglutathione lyase / gly...		Lus10009580 [exp]	2.4	0.9255
AT2G20515			unknown protein		Lus10022928 [exp]	3.0	0.9481
AT4G38210		ATHEXPALPHA1.23...	EXPANSIN 20, expansin A20 (.1)		Lus10013849 [exp]	4.2	0.9437
AT3G03920			H/ACA ribonucleoprotein comple...		Lus10020289 [exp]	7.7	0.9060
AT3G27360			Histone superfamily protein (....		Lus10013948 [exp]	10.9	0.9473
AT2G30620			winged-helix DNA-binding trans...		Lus10006562 [exp]	14.8	0.9219
AT2G20515			unknown protein		Lus10024890 [exp]	14.9	0.9195
AT3G57830			Leucine-rich repeat protein ki...		Lus10021022 [exp]	15.2	0.9199
AT5G45590			Ribosomal protein L35 (.1)		Lus10010406 [exp]	15.9	0.9087
AT3G45980		H2B, HTB9	HISTONE H2B, Histone superfami...		Lus10041347 [exp]	17.5	0.9293

Compare expression of checked genes

Lus10023183 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.