Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G18195 97 / 3e-23 ATPUP8, AT4G18200 ARABIDOPSIS THALIANA PURINE PERMEASE 8, purine permease 8 (.1) AT4G18210 96 / 4e-23 ATPUP10 purine permease 10 (.1) AT4G18220 95 / 9e-23 Drug/metabolite transporter superfamily protein (.1) AT4G18190 91 / 2e-21 ATPUP6 purine permease 6 (.1) AT4G08700 90 / 5e-21 ATPUP13 Drug/metabolite transporter superfamily protein (.1) AT4G18205 90 / 6e-21 AT4G18200 Nucleotide-sugar transporter family protein (.1) AT4G18197 90 / 8e-21 PEX17, ATPUP7, AT4G18200 PEROXIN 17, ARABIDOPSIS THALIANA PURINE PERMEASE 7, purine permease 7 (.1) AT5G41160 88 / 2e-20 ATPUP12 ARABIDOPSIS THALIANA PURINE PERMEASE 12, purine permease 12 (.1) AT1G44750 84 / 1e-18 ATPUP11 purine permease 11 (.1.2.3) AT2G33750 67 / 5e-13 ATPUP2 purine permease 2 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10038492 [exp] 290 / 7e-98 AT4G18210 344 / 3e-116 purine permease 10 (.1) Lus10008689 [exp] 162 / 9e-48 AT4G18210 382 / 3e-131 purine permease 10 (.1) Lus10026130 [exp] 161 / 1e-47 AT4G18210 382 / 2e-131 purine permease 10 (.1) Lus10043397 [exp] 92 / 2e-22 ND 166 / 9e-50 Lus10028132 [exp] 94 / 4e-22 AT4G18220 361 / 4e-123 Drug/metabolite transporter superfamily protein (.1) Lus10030927 [exp] 93 / 5e-22 AT4G18210 336 / 1e-113 purine permease 10 (.1) Lus10040118 [exp] 92 / 1e-21 AT4G18210 336 / 2e-113 purine permease 10 (.1) Lus10019503 [exp] 87 / 7e-20 AT1G44750 452 / 1e-159 purine permease 11 (.1.2.3) Lus10043350 [exp] 85 / 5e-19 AT1G44750 456 / 8e-161 purine permease 11 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G352100 [exp] 129 / 2e-35 AT4G18210 398 / 1e-137 purine permease 10 (.1) Potri.001G352200 [exp] 110 / 2e-28 AT4G18220 315 / 1e-105 Drug/metabolite transporter superfamily protein (.1) Potri.001G147600 [exp] 105 / 2e-26 AT4G18210 315 / 7e-105 purine permease 10 (.1) Potri.014G043900 [exp] 100 / 1e-24 AT1G44750 434 / 2e-152 purine permease 11 (.1.2.3) Potri.002G099600 [exp] 65 / 4e-12 AT1G28220 229 / 2e-72 purine permease 3 (.1) Potri.005G160300 [exp] 55 / 1e-08 AT1G28220 413 / 8e-145 purine permease 3 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10023318 pacid=23181076 polypeptide=Lus10023318 locus=Lus10023318.g ID=Lus10023318.BGIv1.0 annot-version=v1.0 ATGACCACACAGCAGCCTTCCGAAATCCAACTCCAAGTTCTTGGCGGCGGCGATGACATCAAAGAGCCGCCGGCGGCGGCAGCGGGGAACCAGACTCACG CAACGAAAAGAAACTACTGGTGGTGGACAAAAGTCGCTATCTACACAGTCCTTGTCCTCTTAGGACAATCCGTCGCCCTTCTCTTAGGGAGGCTCTACTT CGTGAAAGGTGGCACCAGCAAATGGATTTCATCCACCGTCCAAGTCGCCGGGTTTCCGATCCTCATCCCTTACTACCTCCTCGTACTACCCAAACAGCAG CGAGATGATCAGGGCTCCTCCAAACTGCCGACGGTCGGGACGGCGGCACCATCCCCGTTCACTCTGGTATGGATCTACACCGGACTGGGACTAATCTTAG GATTCAACACCTTCCTCTACTCAGTCGGTCTCCAATACGTCCCGGTTTCCACCTACACACTCCTCTGTTCATCCCAACTAGCATTCAACTCCTTCTTCGC CTACTTCCTCAACTCCCAGAAATTCACCCCTTACATCGTCAACTCCTTAATCCTCCTCACAATCTCCTCCCTCCTCCTCGTCTTCAACACCTCCGACGAC AACTCCGGTGGCCCCACAATCTCCAAATCAAATACAAATACACCACAGGCTTCCTCTGCACTCTGGCCGCCTCCGCCATCTACGGCCTAA
AA sequence Show only first row Show all	>Lus10023318 pacid=23181076 polypeptide=Lus10023318 locus=Lus10023318.g ID=Lus10023318.BGIv1.0 annot-version=v1.0 MTTQQPSEIQLQVLGGGDDIKEPPAAAAGNQTHATKRNYWWWTKVAIYTVLVLLGQSVALLLGRLYFVKGGTSKWISSTVQVAGFPILIPYYLLVLPKQQ RDDQGSSKLPTVGTAAPSPFTLVWIYTGLGLILGFNTFLYSVGLQYVPVSTYTLLCSSQLAFNSFFAYFLNSQKFTPYIVNSLILLTISSLLLVFNTSDD NSGGPTISKSNTNTPQASSALWPPPPSTA

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G18210		ATPUP10	purine permease 10 (.1)		Lus10023318 [exp]	0	1
AT4G18210		ATPUP10	purine permease 10 (.1)		Lus10023317 [exp]	1.0	0.9698
AT2G25770			Polyketide cyclase/dehydrase a...		Lus10040227 [exp]	1.7	0.8805
AT1G04220		KCS2	3-ketoacyl-CoA synthase 2 (.1)		Lus10021895 [exp]	2.8	0.8851
AT1G01120		KCS1	3-ketoacyl-CoA synthase 1 (.1)		Lus10010108 [exp]	5.7	0.8190
AT5G65380			MATE efflux family protein (.1...		Lus10024945 [exp]	8.7	0.8702
AT1G17840		AtABCG11, WBC11...	DESPERADO, CUTICULAR DEFECT AN...		Lus10040644 [exp]	11.2	0.8390
AT4G12110		ATSMO1-1, SMO1-...	sterol-4alpha-methyl oxidase 1...		Lus10004322 [exp]	11.5	0.7780
AT1G66950		ABCG39, PDR11, ...	ATP-binding cassette G39, plei...		Lus10027725 [exp]	11.5	0.8060
AT3G24503		ALDH1A, REF1, A...	REDUCED EPIDERMAL FLUORESCENCE...		Lus10023626 [exp]	14.9	0.8269
AT1G50650			Stigma-specific Stig1 family p...		Lus10000696 [exp]	16.1	0.7716

Compare expression of checked genes

Lus10023318 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.