Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G39200 678 / 0 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G11310 657 / 0 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT1G61560 646 / 0 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT2G33670 421 / 4e-141 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT5G65970 392 / 5e-129 ATMLO10, MLO10 MILDEW RESISTANCE LOCUS O 10, Seven transmembrane MLO family protein (.1) AT2G17480 391 / 2e-128 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT1G42560 385 / 7e-128 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT2G17430 385 / 1e-126 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT3G45290 381 / 1e-125 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) AT2G44110 350 / 1e-113 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10040388 [exp] 968 / 0 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10041410 [exp] 786 / 0 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036519 [exp] 785 / 0 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036120 [exp] 476 / 9e-162 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036121 [exp] 434 / 2e-145 AT3G45290 542 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 426 / 1e-141 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10022096 [exp] 403 / 1e-132 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10030729 [exp] 398 / 3e-132 AT2G33670 628 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10013211 [exp] 360 / 8e-117 AT2G33670 623 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G220500 [exp] 698 / 0 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.008G041400 [exp] 687 / 0 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.009G011900 [exp] 642 / 0 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.016G088000 [exp] 544 / 0 AT1G61560 576 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.007G064200 [exp] 483 / 1e-164 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.002G007000 [exp] 443 / 1e-148 AT1G11310 448 / 7e-152 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.006G129700 [exp] 439 / 6e-148 AT3G45290 505 / 1e-175 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Potri.004G050000 [exp] 435 / 2e-147 AT2G39200 490 / 4e-170 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.005G254300 [exp] 435 / 5e-146 AT1G11310 461 / 3e-157 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.002G006700 [exp] 424 / 6e-142 AT2G33670 593 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10023506 pacid=23160573 polypeptide=Lus10023506 locus=Lus10023506.g ID=Lus10023506.BGIv1.0 annot-version=v1.0 ATGGCGGGAGGTGGCGACTATGAACGGACTTTGGAGGAGACTCCGACGTGGGCCGTCGCCGCCGTCTGCTTTGTGCTGGTCGTCATTTCCATATTCATTG AACACCTCATCCATCTCGCCCATAAGTCGTTGCATAAGCTGCACAAGCCAGCACTGGTGGAAGCATTGGAGAAAGTGAAAGCTGAGCTAATGCTCTTAGG ATTCATATCGTTGCTTCTCACAGTGTTCCAAGACCCGATCTCAGGAATCTGCATCTCGAAAAGTGCTGGAGCGAGTTGGCATCCTTGTACTTCGAAGCAG GAGAAAGAAGCAGAAGAGGGTGAAGAAGAAGGCGAGGAAAGCCATCGCCGGCGGCGACTGCTTTTGGAGTTCTTGGGACCTGTCCGGCGTAGCTTGGCGT CGAAAGGCGGCGATAAATGCGCAGACAAGGGAAAAGTTGCGTTTGTTTCAGCGTATGGTATCCACCAGCTGCATATATTCATCTTTGTGTTGGCTGTTTT CCACATCATTTACTGCATCATCACCTATATTCTTGGCAGAACCAAGATGAGGAAGTGGAGGGCATGGGAGGATGAGACCAAGACGCTTCAGTATCAGTAC CATAATGATCCTGAGAGGTTTAGGTTTGCAAGAGATACATCTTTCGGGAGGCGACATATGAACATATGGAGCAAGACTACGATTTCTCTTTGGATTGGGT GCTTCTTTAGGCAGTTTTATGGATCAGTTACCAAGGTCGATTACATGACCTTGAGACATGGATTCATCACGGCACATTTGGCTCCTGGAAGTGAGAACAG ATTTGACTTCCAGAAATACGTCAACAGATCACTTGAGGATGACTTCAAAGAAGTTGTAGGGATCAGTCCGGTTTTGTGGTTCGTTGCAGTAATGCTCCTG CTATCTAACACACATGGATGGTTTGCTTATCTGTGGCTACCTTTTATTCCATTAATTATAATCCTGGTGGTTGGTACGAAGCTGCAAGTGATCATAGCCC AGCTGGGTCTGAGGATTCAGGACAGAGGGGATGTGGTTAAAGGAGCTCCGGTGGTTCAGCCGGGAGATGATCTCTTCTGGTTCAGTCGACCTCGTCTCGT TCTCTTCCTCATCCATTTCTGCCTCTTTCAGAACGCTTTTCAGCTCGCTTTCTTCATCTGGAGCGTGTACGAATTTGGAATCAAAACTTGCTTCCACGAG AAAACTGAGGACATTGTCATCCGAGTTGTAATGGGGGTGATAATCCAAGTGCTGTGCAGTTACGTGACACTGCCACTACACGCACTAGCAACTCAAATGG GATCAAACCTAGTAACTCAAATGGGATCAAACATGAGGCCAACAATATTCAACGACAGAGTAGCCACAGCGCTCAAGAACTGGCACCGGACGGCGAAGAG ACACACCAGGCACGGCGGTGCAAAGTCAGGATCCCACACTCCGACTTCCAGCCGGCCAGGGACGCCAAGTCGCGGCATGTCCCCTGTTCACCTCCTCCAC AATTACCGGGGCAGTACCGGCCCCGACAGCGTAATGAGTTCTCCGGCAAGGAATTCCTACGACAGGTGGGACCCCGAGTCTCTTAATTCGCCTGTTCACC ACCACCACCACCGTTACTACGGAAGCAGCCACGGTGGAAGCAACGGCGGATACCGGGAGGCGGATGAGTTCCAACAGAATGCTGCGAGGCTGGCGCAGCA GATGGAAGTTGAAGACGTTGTGGTGGCGGTGAGGAATCAAGAGGCCAGAGTACCGGCGGGCGGAGGTGAGGCAGAGGGCGGGCTAGCCGCCGGCCACGAG GCTTCCGCCGGGGCTGGAGTCTGTGAGGAGGCAGCAGGAGAGAAACGTTGGTTTGGCGGATTTTACGTTCAGGAAAGGATGAGTGAAAGGATAATTAGTT GTTTTGAGAAGAGGGAAATGTACATTTGTGTTTCTTCTAGTCTATGTAGATCATGA
AA sequence Show only first row Show all	>Lus10023506 pacid=23160573 polypeptide=Lus10023506 locus=Lus10023506.g ID=Lus10023506.BGIv1.0 annot-version=v1.0 MAGGGDYERTLEETPTWAVAAVCFVLVVISIFIEHLIHLAHKSLHKLHKPALVEALEKVKAELMLLGFISLLLTVFQDPISGICISKSAGASWHPCTSKQ EKEAEEGEEEGEESHRRRRLLLEFLGPVRRSLASKGGDKCADKGKVAFVSAYGIHQLHIFIFVLAVFHIIYCIITYILGRTKMRKWRAWEDETKTLQYQY HNDPERFRFARDTSFGRRHMNIWSKTTISLWIGCFFRQFYGSVTKVDYMTLRHGFITAHLAPGSENRFDFQKYVNRSLEDDFKEVVGISPVLWFVAVMLL LSNTHGWFAYLWLPFIPLIIILVVGTKLQVIIAQLGLRIQDRGDVVKGAPVVQPGDDLFWFSRPRLVLFLIHFCLFQNAFQLAFFIWSVYEFGIKTCFHE KTEDIVIRVVMGVIIQVLCSYVTLPLHALATQMGSNLVTQMGSNMRPTIFNDRVATALKNWHRTAKRHTRHGGAKSGSHTPTSSRPGTPSRGMSPVHLLH NYRGSTGPDSVMSSPARNSYDRWDPESLNSPVHHHHHRYYGSSHGGSNGGYREADEFQQNAARLAQQMEVEDVVVAVRNQEARVPAGGGEAEGGLAAGHE ASAGAGVCEEAAGEKRWFGGFYVQERMSERIISCFEKREMYICVSSSLCRS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G39200		ATMLO12, MLO12	MILDEW RESISTANCE LOCUS O 12, ...		Lus10023506 [exp]	0	1
AT3G61440		ATCYSC1, ARATH;...	BETA-SUBSTITUTED ALA SYNTHASE ...		Lus10036370 [exp]	4.7	0.9101
AT5G56110	MYB	MS188, ATMYB80,...	MALE STERILE 188, ARABIDOPSIS ...		Lus10027110 [exp]	12.7	0.9133
AT1G14550			Peroxidase superfamily protein...		Lus10024207 [exp]	15.1	0.9016
AT1G11050			Protein kinase superfamily pro...		Lus10028554 [exp]	20.5	0.8946
AT2G43590			Chitinase family protein (.1)		Lus10003587 [exp]	26.2	0.8999
AT3G07310			Protein of unknown function (D...		Lus10002342 [exp]	27.6	0.9082
AT5G55690	MADS		MADS-box transcription factor ...		Lus10007371 [exp]	30.0	0.8895
AT4G12520			Bifunctional inhibitor/lipid-t...		Lus10010765 [exp]	30.7	0.8661
					Lus10041686 [exp]	35.0	0.8947
AT2G33420			Protein of unknown function (D...		Lus10011785 [exp]	38.0	0.8897

Compare expression of checked genes

Lus10023506 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.