Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G50030 238 / 4e-62 TOR target of rapamycin (.1.2) AT5G40820 182 / 4e-45 ATATR, ATRAD3, ATR ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) AT3G48190 175 / 7e-43 PIG1, ATATM, ATM pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) AT2G35075 61 / 1e-08 unknown protein AT4G36080 54 / 3e-06 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (.1.2.3) AT2G17930 54 / 5e-06 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) AT1G60490 52 / 1e-05 PI3K, ATVPS34 PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037246 [exp] 210 / 2e-53 AT1G50030 4101 / 0.0 target of rapamycin (.1.2) Lus10035661 [exp] 204 / 8e-52 AT1G50030 2590 / 0.0 target of rapamycin (.1.2) Lus10025091 [exp] 179 / 3e-44 AT5G40820 3033 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10023991 [exp] 177 / 1e-43 AT5G40820 3276 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10021010 [exp] 139 / 8e-37 ND / Lus10019489 [exp] 129 / 5e-29 AT3G48190 3373 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10000064 [exp] 78 / 9e-16 AT3G48190 248 / 2e-76 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10041911 [exp] 59 / 9e-08 AT2G17930 989 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10041910 [exp] 59 / 1e-07 AT2G17930 5862 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G147800 [exp] 4791 / 0 AT1G50030 252 / 2e-66 target of rapamycin (.1.2) Potri.001G289200 [exp] 230 / 1e-59 AT1G50030 4080 / 0.0 target of rapamycin (.1.2) Potri.009G084500 [exp] 224 / 6e-58 AT1G50030 4038 / 0.0 target of rapamycin (.1.2) Potri.004G179000 [exp] 180 / 2e-44 AT5G40820 3459 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Potri.015G076650 [exp] 131 / 1e-29 AT3G48190 3584 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Potri.007G057850 [exp] 53 / 5e-06 AT2G17930 1074 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.012G075100 [exp] 52 / 9e-06 AT1G60490 1388 / 0.0 PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 (.1) Potri.005G114300 [exp] 51 / 3e-05 AT2G17930 6266 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0016 [flax] [poplar] PKinase PF00454 [flax] [poplar] PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase
Representative CDS sequence Show only first row Show all	>Lus10023840 pacid=23160654 polypeptide=Lus10023840 locus=Lus10023840.g ID=Lus10023840.BGIv1.0 annot-version=v1.0 ATGATGCAAGGACTTCACCACCAGCAACAGCAACTAGCAGCTCTCCTCTCCGTCGCTCTCGCCAAAGACGACTCCCCCGGCGGCGGCGTAACTCCCTCTC CTTCCACAGCTTCTTCCTCATCCGCCACCGCGCCTCCCCTGATTACGACGAAAGCAACTAGCAGTAGCGCTTCCAATGCCGACGACTCCGCTCGTCTCAG TGCCATCAACTCCCTCCATCGCGCCATTCTCTATCCTCCCAACTCCCTCCTCGTCTCTCACTCTGCTTCCTTCCTCTCCCAGGGCTTCTCCCAGCTCCTC TCCGACAAGTCACAAACAGTGAGGCGGGCTGCAGCAGTTTCGTACGGGGCACTCTGTGCGGTGTTGTGTTCGATTCAGATTGGACCGAACGGAAGGCCGA ACCATCTCCTGCTTGGTGGTTTGGTTGACAGGTTTATTTCTTGGGCTTTGCCATTGCTTACCAATGTTGCTGCTGGTGATGGTGCTATCGAACTAGCAGT GGAAAGCCTGCATGAGTTTCTTAGTGTTGGAGATGTTGTTGGTACTGAACGGTTTGCTGTACCGATTCTCAAAGCGTGCCAAGAACTTTTGGAAGATGAG AGAACCTCCTTAAGTTTATTACAGCGGCAGCTGGGCATTTTGACCTTGATTTCGTTGAAGTTCTATAGATTCTTCCAGCCTCATTTTGCTGACATAGTTG ACCTGCTTCTTGGATGGGTGTTGGTACCGAATCTTGCAGAGGCAGATAGGCGCGTGATTTTGGATAGTCTTTTGGAATTTCAGAAGCACTGGGTTGCTAA TTTACAGTTCTCTTTGGGATTGCTGTCAAAGTTCCTGGGTGACATGGAAGTATTGCTTCAAGATGACAGTCAGGGAACTCCCCCACAGTTCCGGAGGTTG CTTGCGTTGCTCTCTTGTTTTTCGACAGTGTTGAAGTCCACTGCTTCCGGATTGCTGGAAATGAACTTGCTTGAACAGATAAGTGAACCTCTTAGCAAAC TGGTTCCACGCTTGTTGCAATGCTTATCCATGATTGGCAAAAAATTTGTATGGTCAAAATCGATTGAGGATTTATGGAAGTGCTTGACTCTCTTGGCAGA AATACTGGGTGAAAGGTTTTCTACCTTGTATCCTCTTGTTGTTGATATATTATTTCATAGCTTGGATCAGAACCGAACCAATCAATTTGGTGCTGAGAAG GTCACTTCCTTTCAGATTCATGGGGTTTTAAAGACCAACCTTCAGTTGCTATCCCTACAAAAACTTGGCCTTCTCCCAGCATCAGTCCCCAAAATACTAG AGTTTGATTCACCAGTATCGCAGTTACGGTTGCATCCCAATCACTTGGTGACGGGAAGTTCTGCTGCCACGTATATCTTCTTGCTTCAACATGGGAATGC TGACGTTGTTCAGCAAGCAATAACTGTTTTGAGTGAAGAGCTGGATTTATTGAAGGGCCTACTGAATAGAACTACCAATTTTAGAAATGAGGTTGATAGT GCTATAGATATTGGGTCTTTTTCTAAATTTGAGTTGCTTGCCCTGATGAAATTCGATTTGAAAGTTCTCTTGACTTGCGTTTCTGTAGTTAGTGAAAAGA AATTGATTGGGCATCCAGAAATTTCTGCATTATATTTGAAAAGATTAAAGAAACTAACTTCTTTTATTTTTGAGAAACTGAATCCCTTTGATCTTGCTAT TCTAAACTGTGTTGAATTGCAAGTCAATATCATTGGTATGCTTGAAAGGCTCAGTTCCATTGAGTTTTGGAGCTGGTGCTCTATAAAGAATCAGACTAGT GGGACAACTTCTCTCGATGCAGTTTCTGAAGCTACAGACAATACCGCCAGCCCTTGGGGTGAATATTCTGCTTTTGTTGCTGAGCTTCTTGGAAAGTATA ATATAATTCTCGTCCAATCATTACATTATGGATCTCCTCTTGCTCTTAAAATGGCTGCGTTAGGATGGATAGAAGGATTCTGCAAAGTTCTTGTTAGTTT CGAGCACTCAGACCTGAAATTGTCTTCCTGTGAGGCATTTGGTTGCTATAATGCTGTTGGGAATATAGTTTCTGCTGTTTTTGGTGCTGCTTCTGACAAG GAACCAAAAGTGAGGTTAGCTGTTGCTTTGGTTCTGGAGCTGCTTCTACAAGTAAGGCTCATAGATGCCATGTGTTTCTATCCCATGGCTGAAATTGTGT TGGAAAAGCTTGGTGATTCAGATGCAGATGTCAAGATGGCATTTGTTACACTGCTCTCAAATGTCTTGCCTATTTCTGTTTATGCATGTGGCTTATTTCA CAGTGGCTTATCAATCATGTGCAAGCCGAGAGGGCTTGCAGCCGGCAACTCGTCTAACTTGCACTGGAAGCAAGTGTTTGCCCTGAAGCAGCTGAAAAAG CAACTTCACTCGCAGCAGCTTGTTACTATTTTAAGTTATATATCTCAAAGATGGAAAGCACCTCTATCTTGTTGGATCCATCGGCTCAGTCATGCCAGTA GGAACTTACGGGATAGCACAGTAGGCCAACTTGAGGATCCTCATAATTCTTCTTCTGGCATTTTGTGGTTAGACAAAACAATGGATGAAGATCTGCTTGA AAGGACGCGTTTGGTTAATGATCTAGCTGGTGCTTGGTGGGCTATACACGAAGCAGCCAGATACTGTATTACGACACGTTTGAGGACTAACCTTGGTGGA CCTAGTCAAACTTTTGCAGCATTGGAAAGAATGCTTTTGGATGTTGCACATGTGCTTCAGCTTGATGTTGAACAAAGTGATGGTAACCTTGGTATTGTGG GCTCTTCGGGTGCTCACCTATTGCCAATGAGGCTACTTTTGGAGTTTGTGGAGTCCTTAAAGAAGAATGTATACAATGCATATGATGGATCAGCCATTTT ACCACCTGCAACTCGACAGAGTTCCTTGTTCTTTAGGGCAAATAAGAAGGTCTGTGAAGAGTGGTTTTCTCGTATATGTGAACCAATGATGAATGCCGGA TTAGCATTGCAATGTCACGATGCTACAATTCAATATTGTACTTATCGCTTGCTGGAGATCAAAAGTATGTTTACTTCAGCATTAAAGGAAAAATCTAGGC CACACACATCAGAGAACCTCCATAACACTAGAGACAGGTTTTCTAGAGACATCTTGCAGGTCTTACGTCATATGGCACTTGCTCTATGCAGGAGTCAGGA TTCAGAAGCATTGACAGGACTACAGCAATGGGCTTCAATGACATTTTCTACGTTGCTTTTAGATGAAAACCAGTCCGCAGGTTACAATGGCGTGTCAGGG CCTCTCACGTGGATTTCTGGTCTAATATTTCAGTCAAAATGCCAATATGAAAAAGCTGCTGCTTATTTCAGCCACTTACTTCAAAATGATGAATCACTCA GTTCCATGGGTTCTGATGGAGTCCAGTTTATAATAGCCCGTATAATTGAGAGTTATGCAGCTGTCTCTGATTGGAAGTCTCTTGAATTGTGGCTATCAGA GTTGCAGACACTCCGTTCTAAACATGCGGGAAAGAGTTACTCTGGTGCTCTGACTACAGCAGGGAATGAAGTCAACGCAATTCATGGCTTGGCTCGTTTT GACGAGGGTGACTTTCAAGCTGCTTGGTCATTCCTGGATTTGACTCCTAAAAGTAGTTGTGAACTCACCCTTGACCCTAAACTGGCTTTGCAGAGGAGTG AACAAATGCTTTTACAGGCAATGATGCTTTCCGGTGTGGGGAAGGAAGACAAGGTGGCACATGAAATACAGAAGGCAGAGTCAATGTTGGATGAGATTTT GTCTATTTTGCCACTTGATGGTATAGCTGATGCAGCTCCTTATGCAACTCAGTTACACTGCATCTTTGCATTTCAGGAAGGCCAGAAGCTAAAGGGAAGC CAAGCTAAACCTCAGCAGCACCAATCATTGTTGATCTCTTACATTGACAGCATGCAGTTACCGATGAGCACGGTTCATCAAGATTGTAATCCATGGTTAA AAGTTCTTAGGGTTCACCAGAACATGTTTCCAGCTTCTCCATTCACTCTTAAGCTTTCTATGAGTTTGTTACGTTTAGCTCGCAAGCAAGGGAACTTCAT GTTGGCAAACCGCATGACTAATAATCTACGAGATAACATAATGAGGTGTTCTGAGAAGAGCTACCATAACTATTTTTTGTTAGGTCTCCAATACGAAGAA TTGGTTTTGAAGCATGCTGAAAACAAGATTGAAGATGCTTTTGCACATATTTGGTCTCTTCTGCACCCTTGTGTTTTTTCTCCTGAACCTGTACGTTCAA GTTCTGATGAGGGTATTTTGAAGGCCAAGGCTTGCTTGAAACTTGCAAAATGGTTGAGACTTGACTATCCTGATTTGTGTCTTGATAATGTTATTCTTAA GATGATAGCTGATTTCAAAGTGAATGATGGGTCCATATTTGGTAAAAGTAAAAGAGTTTCTGGTGACTCCGAATCTGAAACTAGTGCAGGTTCTGCTATA GAGGAATTTGTGGGTACTACAATAAAGTTGTCAACACAACTATGCCCAACAATGGGCAAGGCATGGATTTCTTATGCCTCATGGTGCTTTAATCAGGCCC GAGACTCACTCTTCAGACCGTCTGAAACTGTACTCCAGTCATGTTCATTCTCCCCAGTACTTTGTCCTGAGATCTTTCCTGAAAGATTCAAGCTAACTGA AGATGAGATGGCAAGTGTGCAGCTACTAATCTTCGGTCTCTTCCGGAATGAAGGCACTTCTTTGGATGGTGAGGGGAAAGAGGTAAAGTCTTGGCTTGAA ACACACTCAGGAGGCAGCAGCTCTGTCAATGCTTTGCTGCAGCAGGTGATCAGCATGATTGAAACTACAGCTGGTTTGCCAGGTGCAGATAACTCACGTG GAGAACCCCTTTCTGTGACCCTTGCTTCTCAACTTCAGAATTTCATCCTAAGCACAAATAATATGCTAGATGAGTCGAAACTTTCAATTGTGGTGGATAA ATTAGTTAACATTTGGTGGCGTTTGAGAAAAAGAAGGGTGTCTTTATTTGGGCATGCTGCTCATGGTTTCATGAAATATCTTACTTGTTCATCTGCAAAG ACTTCTGATGGTCTTGCTGGATCCAAATGCGAGTTATTAAAACAAAAATCGAGCAGCTACACGTTGAGGGCTAGCTTGTATGCTCTACACATCATCCTTG ATTATGGAGTTGAGTTAAAAGATATAATTGAGCCTTCTCTTTCAATGCTTCCTTTGTTGCCGTGGCAGGAACTTACTCCCCAGCTGTTTGCTCGTCTAAG TTCACATCCAGAGCAAGTGGTACGGAGACAACTAGAGGGCATACTAATGATGTTGGCAAAGATGTCTCCTTGGTCAATAGTGTATCCGACGCTTGTTGAT GTAAATGCTAGTGAGGAACAGCCCTCGGAGGAGCTTCAGCACATATTGGGATCCTTGAGAGAGCTATATCCTAGATTAATTCAGGATGTCGAGTTGATGA TAAGTGAGCTTGGGAATGTAACCGTGCTTTGGGAGGAACTTTGGCTTAGTACTCTTCAGGATCTTCATGCAGAATACATCAGTTGCAGCTTCTCGCTATT TTTCCCCCCAGATGTCATGAGGCGTACCAATGTTCTGAAAGAGGAAGCCACACGAATTGCGGAAAATGCTACTTTGAGTCTGAATGAGAAGAAAAAAATC AATGGTGCAAAGTACTCAGCCATGATGGCCCCCATCATTGTAGCTTTAGACCGCCGGCTTGCTTCAACTTCTCGAAAACCTGAAACGCCACATGAGGCAT GGTTCTGTGAGGAATATAGGGAACGACTGAAACTGGCCATTTCTAAGTTCAAGACTCCTCCAGCTTCTGCTGCTTCTCTTGGAGATTTATGGCGTCCATT TGAGGATATTGCTTCTTCCCTGGCATCCTATCAGAGGAAGTCGTGCATAACTTTAGGAGAAGTTGCACCCCGCCTGGCTTTGTTATCATCATCTGATGTC CCAATGCCTGGTCTCGAGAAGCAAGTCAGCATATCTGACTCTGAGAAGGATCTGGTTACTACCCAAGGGATAAGAATTGCTTCTTTTTGTGAAGAGGTGA CTATATTGTCCACTAAGACAAGGCCTAAGAAACTTGTTATGCATGGCTCAGATGGTCAAAAGTACACTTATCTTTTAAAAGGACGAGAAGATCTGCGACT TGATGCCAGAATCATGCAGCTCTTACAGGCTATTAATGGTTTTCTACGCGCATCCTCTGATACTCATAAGGATTTGCTCTCAGTGCGATATTATTCTGTG ACTCCAGTCAGTGGTCGTGCTGGTCTCATCCAGTGGGTGGACAATGTGATAAGCATATACAGTGTCTTCAAATCATGGCAAAACCGAATGCAGCAGGCTC AACTTGCTGCTGTCAATGCAGGGAATACAAGAGGCTCTGGCCCTCCACCTATTCCTAGACCAAGTGACATGTTCTACGGGAAAATCATACCTGCCCTTAA AGAGAAAGGAATAAGGAGAGTAATCTCAAGAAGAGACTGGCCACAAGATGTTAAGCGTAAGGTTCTTCTGGATCTGATGAAGGAGGTTCCTAGACAACTT CTACATCAGGAACTTTGGTGTGCTAGTGAAGGGTTCAAAGCCTTCAGCTCAAAGTTAAAAAGGTATTCTGGAAGTGTTGCAGCCATGAGTATCGCGGGAC ACATTTTGGGTTTGGGGGATCGACACTTAGATAACATTCTTGTGGATTTCTGTAGTGGGGATGTTGTACATATTGATTACAATGTTTGCTTTGATAAAGG ACAAAGACTAAAGATTCCAGAGATTGTCCCATTCCGCCTTACCCAGATAATTGAAGCTGCTCTGGGTTTGACTGGAGTGGAGGGAACCTTCAGAGCAAGC TGTGAATCAGTTCTTAGTGTACTGAAGAAAAACAAGGACATAATTTTAATGTTGCTAGAGGTTTTTGTTTGGGATCCTCTTGTGGAATGGACACGAGGAG ATTTTCATGATGACGCAGCAATTGGTGGTGAAGAAAGAAAGGGTATGGAGTTGGCTGTCAGCTTGAGCTTGTTTGCTTCTCGTGTGCAGGAAATACGTGT CCCCTTACAGGAACATCACGATCTACTATTGGCTGCCTTACCCACTGTTGAGTCTGCTCTTGAGAGGTTTGCTGATGTGCTAACCAGATATGAGCTTGCT TCTGCACTGTTCTATCAAGCCGACCAGGAGAGATCTAGTTATATTCTTCATGAGACATCTGCAAAATCAATAGTTGCAGACGCTAGTTCTTCTTTGGAGA AGAGTCGAGGATCCTTTGAATTTCATGCTCGAGAATTTTCCAATACAAAGTCTGTGATGACCGAGAAGGCCCAAGCGGCTGCAACATGGATTGAGAAACA CAACAAAATTTTGGATGCCCTACGAACGAATTTACTTCCAGAAATAAATGCCTCTTTGAAGCTGAGCAGCACAGCAGCAGATAGTTTGTCTCTTACATCT GCTGTCCTTATGGCAGGAATCCCATTGACCATAGTTCCTGAGCCCACACAGGTACAGTGCCAGGACATAGACAGGGAGGTTTTTCAACTCATAGTTGATT TGGATCATGGACTTTCCTCTGTCCTTAATGGAATCCAAGCATATACATTTGCTCTTCAACGTATCCTACCTCTAAATTACATGACTACCAGCATGGTGCA TGGCTGGACGAAGTTGTTACAACTTGCTGCACATGCCCACTCCTCTGATGTTGTCTCTCTTGCTAGAAGACAGGCTGCTGAGCACATTACACGATTGCAT GTGGATAATCTAGATTCTGCTAAACACAGACATTTTGAGCTCTGTTGCCAAGTGGAGAAATATGCTGAAGAGTTTAAAAGAGTTGATGAAGAATCTGTTG AGCTAGCAAACTCCATTGGACATGAAACCGAGTCAAAAGCTAAGGAGCGTCTTATGGGTGCTGTTATCAAGTACATGCATTCTGCTGATCTTATTGTAGG GAAGGATGATTCTAGTTCTTCCAACAAGTTAGGGCAACTAAAGCATAATGCAACCAAGTTTTCAGTTGACCTGGATGATAAGAAGGAGAAGGTAGCAAGT ATTTTGAATATGGCACTAAGTTCCATGTATGATGAGGTTAAGCATAAGATTCATGTGGTCTTAAATGCCTCGGGTAATCCAGGTGATGTGTTTGGTACTA CTTTCAGTGGGTTTGAAGAGCAGGTAGAAAAATGCATACTTGTGGCTGGATTTGTCGGTGAGTTGCGGCATTTCCTTGGTGGTGCTGAATTCCTTCGCAG CAGCGATGTAGATGCAGAACATGAAAGAGATGGGATTTCAAGTTTCCAAAGGACGTTAATATTTTGTAAGTTCCTTGTTGAACAAATGGCTGAAGTTGTT CTACTTGAAGTCATGAAATCTGCTGTTTCACTGAACTCAGAAGTGATGGATGCATTTGGATCAACCTCACAGATTCGAGGTTCCATTGACACTGCTCTGG AGCAGCTCCTAGAAGTTGAACTAGAGAAAGCTTCCTTGAATGAACTAGAAAAGAACTATTTCGTTAAGGTTGGCTTCATTACTGAGCAAAAGCTAGCTCT TGAGGAAGCTGCAATGAAGGGCAGGGATCATCTTTCTTGGGAAGAGGCAGAAGAGCTTGCCTCTCAGGAAGAAGCTTGTAGGGCTCAGCTGGACCAACTC CATCAAGCATGGAACCAAAGGGAATCGCGATCTTCTGCTCTCTTGAAAAAAGAAATAGATATTAGAAATTCCTTGAGTTCTTCTGAGTGGCAGTTCAAAT CCTTAACTGCGGGTGAAGATGCAATAAATCCACAGGATTCAGGAAGCAGAGCACTTCTATTCATGTTAGCTAATCCCTTCTCTGACTTGGAAATAGTTGA TAAAGGTTTGTCAGAATTTAGTGAATCCATTGCTTCATACACAGGTGATTTAACAGATTTGGCAGATTTAGCATCATCTGGGTACTCGATATCAGAACAT ATCTGGAAATTTGGATGGCTATCTTCTAGCCAATGCTTTTTTGTTTGGAAAGTATGCATTGTGGATTCTATTCTAGATTCATGCATACATGATGTGGCTT CATTAATGGATCAGAATTTAGGATTTGACCAGCTCTTCAACGTTGTAAAGAAAAAGCTGCAAGTGCATCTTGAAGATCATGTTGGTCGATACCTGAAGGA GCGAGTTGCACCTATTTTTCTAGTTTGGTTGGACAAAGAAAGTCAGCATTTGAAGCAGTTGACTGAGGGGCAAGAGGAACTTTCTGCTGAACAAGTGAGA AAAGATGTCGGAACTGTTAGGAAGGTCCAGCTCATGCTTGAGGAGTACTGCAATGTACATGAAACTGCTCGAGCTGCAAAATCAGCAGCTTCCTTGATGA AAAAACAAGCAAATGAGCTCAAGGATGCTCTCTATAAGGCTAGCCTTGAGATCGTCCAATTGGAATGGATGTATGATGGTTTAACCCCCTCGCAAAAGAG TAAGGGTATTTTTGATACATTTCTTGGCAGAGGAGATGACCTATTTTCCATCATCGTAAACCTCAGCCGACCAAAACTATTAGAAGGAATGCAATCGGCG ATAACCAATATATCTATGTCAATAGATTCTCTGCAAGGTTGTGAACGAAATTCCATTACTGCAGAAGGACAACTTGAGAGAGCTATGAGCTGGGCATGTG GTGGCCCCAACTCAAATTCAGTGGCACATAGTTCATCAAAAGCTTCAGGGATTCCACATGAATTTCACGATCATCTGGCCAGGCGACGGAAACTACTGTG GGAAGCTAAAGAGAAGGCAACAGCTATGGTAGATATCTGCATGTCAATCTTGGAATTTGAAGCATCAAGAGATGGAATGTTCCAGATACCGGGGGAAAGC CATTCGCCACAGACTGGTGATGATGGCAGGGCATGGCAACAGGCTTACTTCAATGCACTTACGCAATTGGAGATAACTTATCATTCTTTCACACGTGCTG AACAGGAGTGGAAGCTGTCACAAAGCAACATGGAAGCTGCTTCCAGTCAGTTATTTTTGGCGAGCAATGAACTCAGCAATGCATCACATAAAGCGAAGTC AGCATCAGGTGAATTGCAGAGTACCGTTCTTGCTATGCGGGATTGTGCATATGAAGCTAGCACTGCACTTTCTTCTTTTTCTCGTGTGTCAAGGGGCCAC ACTGCCTTGACCTCCGAGTCTGGTACCATGCTTGAAGAGGTTCTCGCAATAACTGAAGACCTACATGATGTTCATACATCAGGAAAGGAGGCTTGTGCAG TACATTACTCCCTTACAGAAGAACTTTCGAAGGCAAATGGGATTCTTCTTCCCCTTGAAGCAATACTATCAAAGGATGTTTCTGCAATGACAGACGCTAT CGCCAGGGAAAAAGAAACCAAACTTGAAGTGTCACCAATTCATGGCCAAGCCATATACCAATCTTATTATTTGAGAATTAGGGAAGCTATTCAGGCATTT AAACCCTTGGCTCCGTCACTTGCATCATCCGTGAAGGGTCTTTATTCAATATTGATCAGTCTTGCTCGTACTGCCAGTCTTCATGCTGGAAATCTTCACA AGGCTCTTGAAGGTTTAGCAGAGAGCCAGGAGGTAAAAACACCGGAGGTCAATTTGTCCAGGCCTGATATTGACAGTGGTGCTGATCAATTTGATGAAAA GGGTATAGAGCAACTATCAAATTCGGAGACTGAAACTGCTGATGATTTCCTTAGTGAAGGTGAATGTACTGAGCAAGAGAAAGGATGGATATCTCCACCG GATAGCATTTGCAGTAACAGCTCGGTATCTGATGTAATCTCTGCTGATACTAGTGTGGCGGACATGTTCGACAATCTAGGTGAATTTCCTCACGGCTCCA ACAATGTGATGGAAACTGGTCACCTGGATTATGCTCCATCTTCTCAAACGGATGATCAGGCAGTCTTTGACTCTTCAGAATCAATATCAAAACATGATGT AATTCAGGATGAAGATCAGGTCAAAGATGACGATTATCAGCTTAACGAACAACTGAAATCTACAATATTGTCTGTGAATAACCCTATTACGACTCCTATG GAGACATTGCAACCTCTTAGTCAGGTTTCCTCTGTGAAATTTGATGGTAAAGATGAGGAGGTATCCTCTTCAAACAGAGATAAGGCTGAAGACATCAGTT ATGAAACTGCTCATCCTAGTTCGCGCGCTCGGTCCCGGGTGGCAAGAGGTAAGAACCCTTATGCCGTCTCAATACTAAGGCGGGTGGAAATGAAAATAGA TGGCCGGGATATTGCAGAGAACAGGTTATCTCTTTTCTTTCCGGTTCTGTTGGGTTCAATGTCCGGGATCGTGGATATGTGGACCGGTGGATATGTGGAT ATGTGGACCGGTGAAGTTGCCAAGCTGAAAGAGAAGGAACAGTCCATGAAAACCCAGGAAGCTGCCAAGGTAGGTGGTGTTAGCGAGTATGTCGAGAACT TGAGGACGACGATGAAGCTGCCTGCATTCCTCTGGTGTTCCGAAGCTTCCTTGTCGATGATTCTCGGCAGCTCCTGTGCTTGA
AA sequence Show only first row Show all	>Lus10023840 pacid=23160654 polypeptide=Lus10023840 locus=Lus10023840.g ID=Lus10023840.BGIv1.0 annot-version=v1.0 MMQGLHHQQQQLAALLSVALAKDDSPGGGVTPSPSTASSSSATAPPLITTKATSSSASNADDSARLSAINSLHRAILYPPNSLLVSHSASFLSQGFSQLL SDKSQTVRRAAAVSYGALCAVLCSIQIGPNGRPNHLLLGGLVDRFISWALPLLTNVAAGDGAIELAVESLHEFLSVGDVVGTERFAVPILKACQELLEDE RTSLSLLQRQLGILTLISLKFYRFFQPHFADIVDLLLGWVLVPNLAEADRRVILDSLLEFQKHWVANLQFSLGLLSKFLGDMEVLLQDDSQGTPPQFRRL LALLSCFSTVLKSTASGLLEMNLLEQISEPLSKLVPRLLQCLSMIGKKFVWSKSIEDLWKCLTLLAEILGERFSTLYPLVVDILFHSLDQNRTNQFGAEK VTSFQIHGVLKTNLQLLSLQKLGLLPASVPKILEFDSPVSQLRLHPNHLVTGSSAATYIFLLQHGNADVVQQAITVLSEELDLLKGLLNRTTNFRNEVDS AIDIGSFSKFELLALMKFDLKVLLTCVSVVSEKKLIGHPEISALYLKRLKKLTSFIFEKLNPFDLAILNCVELQVNIIGMLERLSSIEFWSWCSIKNQTS GTTSLDAVSEATDNTASPWGEYSAFVAELLGKYNIILVQSLHYGSPLALKMAALGWIEGFCKVLVSFEHSDLKLSSCEAFGCYNAVGNIVSAVFGAASDK EPKVRLAVALVLELLLQVRLIDAMCFYPMAEIVLEKLGDSDADVKMAFVTLLSNVLPISVYACGLFHSGLSIMCKPRGLAAGNSSNLHWKQVFALKQLKK QLHSQQLVTILSYISQRWKAPLSCWIHRLSHASRNLRDSTVGQLEDPHNSSSGILWLDKTMDEDLLERTRLVNDLAGAWWAIHEAARYCITTRLRTNLGG PSQTFAALERMLLDVAHVLQLDVEQSDGNLGIVGSSGAHLLPMRLLLEFVESLKKNVYNAYDGSAILPPATRQSSLFFRANKKVCEEWFSRICEPMMNAG LALQCHDATIQYCTYRLLEIKSMFTSALKEKSRPHTSENLHNTRDRFSRDILQVLRHMALALCRSQDSEALTGLQQWASMTFSTLLLDENQSAGYNGVSG PLTWISGLIFQSKCQYEKAAAYFSHLLQNDESLSSMGSDGVQFIIARIIESYAAVSDWKSLELWLSELQTLRSKHAGKSYSGALTTAGNEVNAIHGLARF DEGDFQAAWSFLDLTPKSSCELTLDPKLALQRSEQMLLQAMMLSGVGKEDKVAHEIQKAESMLDEILSILPLDGIADAAPYATQLHCIFAFQEGQKLKGS QAKPQQHQSLLISYIDSMQLPMSTVHQDCNPWLKVLRVHQNMFPASPFTLKLSMSLLRLARKQGNFMLANRMTNNLRDNIMRCSEKSYHNYFLLGLQYEE LVLKHAENKIEDAFAHIWSLLHPCVFSPEPVRSSSDEGILKAKACLKLAKWLRLDYPDLCLDNVILKMIADFKVNDGSIFGKSKRVSGDSESETSAGSAI EEFVGTTIKLSTQLCPTMGKAWISYASWCFNQARDSLFRPSETVLQSCSFSPVLCPEIFPERFKLTEDEMASVQLLIFGLFRNEGTSLDGEGKEVKSWLE THSGGSSSVNALLQQVISMIETTAGLPGADNSRGEPLSVTLASQLQNFILSTNNMLDESKLSIVVDKLVNIWWRLRKRRVSLFGHAAHGFMKYLTCSSAK TSDGLAGSKCELLKQKSSSYTLRASLYALHIILDYGVELKDIIEPSLSMLPLLPWQELTPQLFARLSSHPEQVVRRQLEGILMMLAKMSPWSIVYPTLVD VNASEEQPSEELQHILGSLRELYPRLIQDVELMISELGNVTVLWEELWLSTLQDLHAEYISCSFSLFFPPDVMRRTNVLKEEATRIAENATLSLNEKKKI NGAKYSAMMAPIIVALDRRLASTSRKPETPHEAWFCEEYRERLKLAISKFKTPPASAASLGDLWRPFEDIASSLASYQRKSCITLGEVAPRLALLSSSDV PMPGLEKQVSISDSEKDLVTTQGIRIASFCEEVTILSTKTRPKKLVMHGSDGQKYTYLLKGREDLRLDARIMQLLQAINGFLRASSDTHKDLLSVRYYSV TPVSGRAGLIQWVDNVISIYSVFKSWQNRMQQAQLAAVNAGNTRGSGPPPIPRPSDMFYGKIIPALKEKGIRRVISRRDWPQDVKRKVLLDLMKEVPRQL LHQELWCASEGFKAFSSKLKRYSGSVAAMSIAGHILGLGDRHLDNILVDFCSGDVVHIDYNVCFDKGQRLKIPEIVPFRLTQIIEAALGLTGVEGTFRAS CESVLSVLKKNKDIILMLLEVFVWDPLVEWTRGDFHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLAALPTVESALERFADVLTRYELA SALFYQADQERSSYILHETSAKSIVADASSSLEKSRGSFEFHAREFSNTKSVMTEKAQAAATWIEKHNKILDALRTNLLPEINASLKLSSTAADSLSLTS AVLMAGIPLTIVPEPTQVQCQDIDREVFQLIVDLDHGLSSVLNGIQAYTFALQRILPLNYMTTSMVHGWTKLLQLAAHAHSSDVVSLARRQAAEHITRLH VDNLDSAKHRHFELCCQVEKYAEEFKRVDEESVELANSIGHETESKAKERLMGAVIKYMHSADLIVGKDDSSSSNKLGQLKHNATKFSVDLDDKKEKVAS ILNMALSSMYDEVKHKIHVVLNASGNPGDVFGTTFSGFEEQVEKCILVAGFVGELRHFLGGAEFLRSSDVDAEHERDGISSFQRTLIFCKFLVEQMAEVV LLEVMKSAVSLNSEVMDAFGSTSQIRGSIDTALEQLLEVELEKASLNELEKNYFVKVGFITEQKLALEEAAMKGRDHLSWEEAEELASQEEACRAQLDQL HQAWNQRESRSSALLKKEIDIRNSLSSSEWQFKSLTAGEDAINPQDSGSRALLFMLANPFSDLEIVDKGLSEFSESIASYTGDLTDLADLASSGYSISEH IWKFGWLSSSQCFFVWKVCIVDSILDSCIHDVASLMDQNLGFDQLFNVVKKKLQVHLEDHVGRYLKERVAPIFLVWLDKESQHLKQLTEGQEELSAEQVR KDVGTVRKVQLMLEEYCNVHETARAAKSAASLMKKQANELKDALYKASLEIVQLEWMYDGLTPSQKSKGIFDTFLGRGDDLFSIIVNLSRPKLLEGMQSA ITNISMSIDSLQGCERNSITAEGQLERAMSWACGGPNSNSVAHSSSKASGIPHEFHDHLARRRKLLWEAKEKATAMVDICMSILEFEASRDGMFQIPGES HSPQTGDDGRAWQQAYFNALTQLEITYHSFTRAEQEWKLSQSNMEAASSQLFLASNELSNASHKAKSASGELQSTVLAMRDCAYEASTALSSFSRVSRGH TALTSESGTMLEEVLAITEDLHDVHTSGKEACAVHYSLTEELSKANGILLPLEAILSKDVSAMTDAIAREKETKLEVSPIHGQAIYQSYYLRIREAIQAF KPLAPSLASSVKGLYSILISLARTASLHAGNLHKALEGLAESQEVKTPEVNLSRPDIDSGADQFDEKGIEQLSNSETETADDFLSEGECTEQEKGWISPP DSICSNSSVSDVISADTSVADMFDNLGEFPHGSNNVMETGHLDYAPSSQTDDQAVFDSSESISKHDVIQDEDQVKDDDYQLNEQLKSTILSVNNPITTPM ETLQPLSQVSSVKFDGKDEEVSSSNRDKAEDISYETAHPSSRARSRVARGKNPYAVSILRRVEMKIDGRDIAENRLSLFFPVLLGSMSGIVDMWTGGYVD MWTGEVAKLKEKEQSMKTQEAAKVGGVSEYVENLRTTMKLPAFLWCSEASLSMILGSSCA

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G50030		TOR	target of rapamycin (.1.2)		Lus10023840 [exp]	0	1
AT2G25660		EMB2410	embryo defective 2410 (.1)		Lus10001859 [exp]	10.4	0.9251
AT2G07820			unknown protein		Lus10015035 [exp]	11.1	0.9232
AT1G80070		EMB33, EMB177, ...	ABNORMAL SUSPENSOR 2, EMBRYO D...		Lus10011489 [exp]	12.4	0.9209
AT3G61740		SDG14, ATX3	SET domain protein 14 (.1.2)		Lus10012626 [exp]	16.2	0.8712
AT2G17930			Phosphatidylinositol 3- and 4-...		Lus10028458 [exp]	17.8	0.9151
AT1G80070		EMB33, EMB177, ...	ABNORMAL SUSPENSOR 2, EMBRYO D...		Lus10023129 [exp]	18.3	0.9141
AT4G00450		CCT, CRP	CRYPTIC PRECOCIOUS, CENTER CIT...		Lus10014778 [exp]	19.8	0.9182
AT1G55860		UPL1	ubiquitin-protein ligase 1 (.1...		Lus10032830 [exp]	20.1	0.9100
AT1G64790		ILA	ILITYHIA (.1.2)		Lus10003102 [exp]	23.7	0.9165
AT1G02080			transcription regulators (.1.2...		Lus10024660 [exp]	28.7	0.9150

Compare expression of checked genes

Lus10023840 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.