Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36780 508 / 2e-177 UDP-Glycosyltransferase superfamily protein (.1) AT2G36770 497 / 3e-173 UDP-Glycosyltransferase superfamily protein (.1) AT2G36750 493 / 1e-171 UGT73C1, UGT72C1 UDP-glucosyl transferase 73C1 (.1) AT2G36760 490 / 2e-170 UGT73C2 UDP-glucosyl transferase 73C2 (.1) AT2G36800 489 / 3e-170 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT2G36790 479 / 4e-166 UGT73C6 UDP-glucosyl transferase 73C6 (.1) AT3G53160 473 / 1e-163 UGT73C7 UDP-glucosyl transferase 73C7 (.1) AT3G53150 447 / 1e-153 UGT73D1 UDP-glucosyl transferase 73D1 (.1) AT2G15490 347 / 8e-115 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT4G34131 338 / 6e-111 UGT73B3 UDP-glucosyl transferase 73B3 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014404 [exp] 892 / 0 AT2G36760 507 / 4e-177 UDP-glucosyl transferase 73C2 (.1) Lus10023893 [exp] 572 / 0 AT2G36780 495 / 1e-172 UDP-Glycosyltransferase superfamily protein (.1) Lus10014403 [exp] 558 / 0 AT2G36780 506 / 6e-177 UDP-Glycosyltransferase superfamily protein (.1) Lus10014437 [exp] 461 / 1e-158 AT2G36780 545 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10016268 [exp] 457 / 2e-157 AT2G36780 498 / 1e-173 UDP-Glycosyltransferase superfamily protein (.1) Lus10012011 [exp] 449 / 1e-154 AT2G36780 488 / 8e-170 UDP-Glycosyltransferase superfamily protein (.1) Lus10003323 [exp] 437 / 4e-149 AT2G36800 493 / 2e-171 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Lus10003322 [exp] 434 / 3e-148 AT2G36780 468 / 9e-162 UDP-Glycosyltransferase superfamily protein (.1) Lus10027739 [exp] 411 / 2e-139 AT2G36780 453 / 2e-156 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G048700 [exp] 530 / 0 AT2G36800 550 / 0.0 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Potri.006G120600 [exp] 468 / 5e-162 AT3G53150 617 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.016G097400 [exp] 448 / 4e-153 AT3G53150 626 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.001G302400 [exp] 376 / 6e-126 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G302300 [exp] 374 / 3e-125 AT4G34131 488 / 4e-170 UDP-glucosyl transferase 73B3 (.1) Potri.009G098400 [exp] 372 / 3e-124 AT2G15490 505 / 8e-177 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.009G099032 [exp] 359 / 3e-119 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303700 [exp] 358 / 6e-119 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.009G098966 [exp] 357 / 1e-118 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303300 [exp] 355 / 1e-117 AT2G15480 555 / 0.0 UDP-glucosyl transferase 73B5 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10023894 pacid=23160720 polypeptide=Lus10023894 locus=Lus10023894.g ID=Lus10023894.BGIv1.0 annot-version=v1.0 ATGGCTACCGAAACTACCCCTCAGCCTCACCCACTCCACTTCGTCCTCATCCCTTTCATGGCCCAAGGCCACTTGCTTCCCATGACCGACATCGCCAAGC TTTTCGCCCGACACGGTGTCCTTGTCACCTTCATCACCACTCCGGTCAACGCCGGCCGAGTCCGAGCCACGCTCGCACGTGCTGTGGCGGACTCCCCCGC CGTACAGATACGTGTGGAGGAAGTCGAGTTCCCATGCGAAGAAGAAGAAGAAGGTGGTGGTGATGGGCTTCTTCTACTGCCTAAGCACTGCGAGACCTTG GACCGGCTTCCTTCTTTGGGTCTTGGCTCCAACTTCTTCTACTCAACGGACTCGCTCAGAAAGCCCGTAGAGAAGCTGTTCGAAGGGCTTCGACCCAACC CCAGCTGCGTGGTTTCAGATATATGTCTCCCTTTCACGGCCCATGTGGCAGAAAAGTTTGGTGTACCTCGGATTACTTTCAATGGGTTCTCCACTTTTAC TTTGCTTTGTCTCCGTTACATCCATGATAAAAACGTTATGGGTGTGGTTGGTCGGGATTCGGAACCGTTCGTCGTGCCGGGGATCCCTGATCGGGTCGAG TTGACGAAGAACCAACTGCCTTTGTCCATGACTGATGGGTTGGATCGGTTCGGTGAGCAGATAATGGTAGCGGAGGCGTTGTCTTACGGTATGATTGTGA ACTCGTTCGAGGAGTTAGACCCCGAGTATGTCGAGAAGTACAAGGTTGCAATGGGAGGTAAAGCATGGTGTGTGGGTCCCGTCTCATTGGTCAACGAAAG CCAGCTGGATAGGCTTCAACGAGGTAATAATGCTCAATATGCGACTGGCGAATCAAAATGTTTAAATTGGCTCGACTCGCGAAAATCAGGTTCGATCATC TATGTGTGTCTTGGGAGCATATGTAACATCCCGACCCGACAGTTAATTGAACTTGCACTTGGTCTGGAAGCTTCGAACGTCCCTTTCATGTGGGTCATTA GAGATCGGGGAGAAGCTTCGAAAGAGTTGTGGGAATGGATGAACGAGTACGATTTTGAGGAAAAGACAAAAGAAAGAGGCTTCTTGATTCAAGGTTGGGC CCCACAGATGGTGATCCTGGCCCACCAAGCGGTCGGAGGGTTCCTCACCCATTGCGGGTGGAATTCCACGCTCGAAGGGATATGCGCCGGCGTGGCAATG TTAACGTGGCCGCTTTTCGGAGACCAGTTTTGCAACGAGAGGTTAGTAGTGGACGTGTTGAAGATCGGGATTGGGATCGGGGCAAACAATACAGTGAAGT GGGGAGAAGAAGACAAGGTTGGAGTGTTGGTGAAGAAGGAGAATGTAAAGAAAGGCATAGATGAGGTGATGAGTGAGGGAGAGGAAGGAGATATGAGGAG GAGGAGAGTCAAAGAATTGAGTGGAAAGTCAAAGTTGGCATTGCTAGAAGGAGGGTCTTCCTATGTCAACATCGAGCGTTTGAAACAAGACATCCTAGAG CAAACATCTATAAAGCTTTTCACGCGCCATTAA
AA sequence Show only first row Show all	>Lus10023894 pacid=23160720 polypeptide=Lus10023894 locus=Lus10023894.g ID=Lus10023894.BGIv1.0 annot-version=v1.0 MATETTPQPHPLHFVLIPFMAQGHLLPMTDIAKLFARHGVLVTFITTPVNAGRVRATLARAVADSPAVQIRVEEVEFPCEEEEEGGGDGLLLLPKHCETL DRLPSLGLGSNFFYSTDSLRKPVEKLFEGLRPNPSCVVSDICLPFTAHVAEKFGVPRITFNGFSTFTLLCLRYIHDKNVMGVVGRDSEPFVVPGIPDRVE LTKNQLPLSMTDGLDRFGEQIMVAEALSYGMIVNSFEELDPEYVEKYKVAMGGKAWCVGPVSLVNESQLDRLQRGNNAQYATGESKCLNWLDSRKSGSII YVCLGSICNIPTRQLIELALGLEASNVPFMWVIRDRGEASKELWEWMNEYDFEEKTKERGFLIQGWAPQMVILAHQAVGGFLTHCGWNSTLEGICAGVAM LTWPLFGDQFCNERLVVDVLKIGIGIGANNTVKWGEEDKVGVLVKKENVKKGIDEVMSEGEEGDMRRRRVKELSGKSKLALLEGGSSYVNIERLKQDILE QTSIKLFTRH

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36780			UDP-Glycosyltransferase superf...		Lus10023894 [exp]	0	1
					Lus10007507 [exp]	7.8	0.8704
					Lus10011286 [exp]	9.4	0.7819
AT4G31270	Trihelix		sequence-specific DNA binding ...		Lus10041120 [exp]	13.3	0.7821
AT5G62850		ATVEX1, SWEET5,...	VEGETATIVE CELL EXPRESSED1, No...		Lus10002364 [exp]	13.5	0.8683
AT1G78780			pathogenesis-related family pr...		Lus10027315 [exp]	13.8	0.6782
AT5G60900		RLK1	receptor-like protein kinase 1...		Lus10000422 [exp]	14.7	0.8482
AT5G16460			Putative adipose-regulatory pr...		Lus10026836 [exp]	17.7	0.7147
					Lus10041024 [exp]	18.4	0.8661
AT3G54670		ATSMC1, TTN8	TITAN8, STRUCTURAL MAINTENANCE...		Lus10013583 [exp]	21.6	0.7784
					Lus10005830 [exp]	21.9	0.8621

Compare expression of checked genes

Lus10023894 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.