Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G19250 220 / 3e-67 FMO1 flavin-dependent monooxygenase 1 (.1) AT5G45180 146 / 6e-40 Flavin-binding monooxygenase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023940 [exp] 642 / 0 AT1G19250 399 / 3e-134 flavin-dependent monooxygenase 1 (.1) Lus10023942 [exp] 375 / 6e-130 AT5G45180 215 / 4e-65 Flavin-binding monooxygenase family protein (.1) Lus10014439 [exp] 306 / 2e-101 AT1G19250 209 / 1e-61 flavin-dependent monooxygenase 1 (.1) Lus10013230 [exp] 276 / 3e-89 AT1G19250 341 / 2e-111 flavin-dependent monooxygenase 1 (.1) Lus10038126 [exp] 228 / 3e-70 AT1G19250 735 / 0.0 flavin-dependent monooxygenase 1 (.1) Lus10005178 [exp] 227 / 4e-70 AT1G19250 744 / 0.0 flavin-dependent monooxygenase 1 (.1) Lus10020001 [exp] 227 / 5e-70 AT1G19250 709 / 0.0 flavin-dependent monooxygenase 1 (.1) Lus10030750 [exp] 209 / 7e-66 AT1G19250 148 / 5e-41 flavin-dependent monooxygenase 1 (.1) Lus10008454 [exp] 136 / 4e-37 AT1G19250 71 / 3e-13 flavin-dependent monooxygenase 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G143500 [exp] 473 / 2e-166 AT1G19250 400 / 2e-134 flavin-dependent monooxygenase 1 (.1) Potri.018G115800 [exp] 332 / 9e-111 AT1G19250 374 / 4e-124 flavin-dependent monooxygenase 1 (.1) Potri.006G060200 [exp] 326 / 1e-108 AT1G19250 378 / 5e-126 flavin-dependent monooxygenase 1 (.1) Potri.006G060300 [exp] 322 / 2e-108 AT1G19250 285 / 3e-91 flavin-dependent monooxygenase 1 (.1) Potri.005G250600 [exp] 296 / 9e-97 AT1G19250 330 / 4e-107 flavin-dependent monooxygenase 1 (.1) Potri.006G137600 [exp] 230 / 3e-71 AT1G19250 699 / 0.0 flavin-dependent monooxygenase 1 (.1) Potri.001G335900 [exp] 229 / 6e-71 AT1G19250 630 / 0.0 flavin-dependent monooxygenase 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0063 [flax] [poplar] NADP_Rossmann PF00743 [flax] [poplar] FMO-like Flavin-binding monooxygenase-like
Representative CDS sequence Show only first row Show all	>Lus10023941 pacid=23160728 polypeptide=Lus10023941 locus=Lus10023941.g ID=Lus10023941.BGIv1.0 annot-version=v1.0 ATGGAGTATTCTGATCTGGGTGCTGAGGAAGCTGGGAAGGTGGTGAAGGGGAAGAGAGTCGCTGTTGTTGGGTTGCAGAAGCATGCTCTGGATATTGCCA TGGAGTGCTCTGCTATCAATGGGGAGGAGAATCCTTGCAGAGTGATGTACAGAAGAGAGCGCTGGAACGTACCTGATTACATGCCATGGGGTTTCCCACT GGCGAAACTCTACCACAACAGGTTTTCAGAGCTATTGGTTCACAAACCTGGAGAAGACATCCTGCTCATCTTCTTGGCCACCATTTTGGCCCCACTTAGG TGGGCGATCTCCAAGTTTGTCGAAAGCGACATCAAGCACAAGCACCAGTTAGTGAAACATGGCATGCTTCCGAACCACAGCTTTCTTCAGGAGGTAAGTT CGTGCTTGATCTCGAGGGTTCCTGAGAAATTCTACGACAGGGTCGATGAGGGAAGCATCAAGTTGACCAAAGCTCCGAGCTTTAGCTTCTGCAAGGAAGG GGTCGTGGTCGAAGGTCGTGTCGACGAGCAGAAGCCATTGGAAACGGACCTTGTGATATTGGCTACAGGTTTCAAGGGTGAAAAGAAGCTGCAAGATGTC TTTGGATCAAAACATTTCAGAAAAATCATCGTCGGCTCCTCTGACACCGCCGTTCCTCTCTACAGGAATTGCATTTCACCGCGAATTCCACAGCTAGCGG TGCTGGGATTCTCGGAGAGCATCTCGAACCTGTTCACGTCGGAGATGAGGTGCCGGTGGCTGGCGGAGCTTCTGGACGGCAAGTTCAAGCTGCCGGAGAT CAAGGAGATGGAAAAAGAAGCGTCAAGGTGGGACAAGTATCTCAAGGAGTACTTAGGCGACAACTACAAGAGATCGTGCATCGGAGCAATCCATATTTGG CACAACGACCAGCTTTGCAAGGACATGGGCTGGAACCCAAGAAGGAAGAGTGGCATTTGGGCTGAGTTGTTTGAGCCTTACGGCCCACTGGACTACGTCT CCCCCTGA
AA sequence Show only first row Show all	>Lus10023941 pacid=23160728 polypeptide=Lus10023941 locus=Lus10023941.g ID=Lus10023941.BGIv1.0 annot-version=v1.0 MEYSDLGAEEAGKVVKGKRVAVVGLQKHALDIAMECSAINGEENPCRVMYRRERWNVPDYMPWGFPLAKLYHNRFSELLVHKPGEDILLIFLATILAPLR WAISKFVESDIKHKHQLVKHGMLPNHSFLQEVSSCLISRVPEKFYDRVDEGSIKLTKAPSFSFCKEGVVVEGRVDEQKPLETDLVILATGFKGEKKLQDV FGSKHFRKIIVGSSDTAVPLYRNCISPRIPQLAVLGFSESISNLFTSEMRCRWLAELLDGKFKLPEIKEMEKEASRWDKYLKEYLGDNYKRSCIGAIHIW HNDQLCKDMGWNPRRKSGIWAELFEPYGPLDYVSP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G19250		FMO1	flavin-dependent monooxygenase...		Lus10023941 [exp]	0	1
AT1G19250		FMO1	flavin-dependent monooxygenase...		Lus10023940 [exp]	1.0	0.9596
AT3G51380		IQD20	IQ-domain 20 (.1)		Lus10041844 [exp]	52.8	0.7222
AT2G46490			unknown protein		Lus10040009 [exp]	61.1	0.6847
AT2G40000		ATHSPRO2	ARABIDOPSIS ORTHOLOG OF SUGAR ...		Lus10040215 [exp]	75.2	0.7466
AT5G24090		ATCHIA	chitinase A (.1)		Lus10037985 [exp]	75.7	0.7120
AT5G61660			glycine-rich protein (.1)		Lus10032507 [exp]	81.2	0.7377
AT3G22970			Protein of unknown function (D...		Lus10003087 [exp]	110.6	0.7388
AT3G59840			unknown protein		Lus10040110 [exp]	130.3	0.6984
AT4G21200		ATGA2OX8	ARABIDOPSIS THALIANA GIBBERELL...		Lus10029081 [exp]	133.1	0.7010
AT1G56220			Dormancy/auxin associated fami...		Lus10015193 [exp]	148.7	0.6733

Compare expression of checked genes

Lus10023941 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.