Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G19250 204 / 3e-61 FMO1 flavin-dependent monooxygenase 1 (.1) AT5G45180 184 / 4e-54 Flavin-binding monooxygenase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023941 [exp] 383 / 4e-133 AT1G19250 241 / 2e-75 flavin-dependent monooxygenase 1 (.1) Lus10014439 [exp] 384 / 1e-131 AT1G19250 209 / 1e-61 flavin-dependent monooxygenase 1 (.1) Lus10023940 [exp] 385 / 3e-131 AT1G19250 399 / 3e-134 flavin-dependent monooxygenase 1 (.1) Lus10013230 [exp] 243 / 7e-76 AT1G19250 341 / 2e-111 flavin-dependent monooxygenase 1 (.1) Lus10020001 [exp] 219 / 6e-67 AT1G19250 709 / 0.0 flavin-dependent monooxygenase 1 (.1) Lus10038126 [exp] 207 / 3e-62 AT1G19250 735 / 0.0 flavin-dependent monooxygenase 1 (.1) Lus10005178 [exp] 204 / 5e-61 AT1G19250 744 / 0.0 flavin-dependent monooxygenase 1 (.1) Lus10030750 [exp] 159 / 3e-46 AT1G19250 148 / 5e-41 flavin-dependent monooxygenase 1 (.1) Lus10023944 [exp] 112 / 6e-28 AT4G38380 154 / 1e-41 MATE efflux family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G143500 [exp] 402 / 4e-138 AT1G19250 400 / 2e-134 flavin-dependent monooxygenase 1 (.1) Potri.018G115800 [exp] 296 / 2e-96 AT1G19250 374 / 4e-124 flavin-dependent monooxygenase 1 (.1) Potri.005G250600 [exp] 286 / 1e-92 AT1G19250 330 / 4e-107 flavin-dependent monooxygenase 1 (.1) Potri.006G060200 [exp] 236 / 4e-73 AT1G19250 378 / 5e-126 flavin-dependent monooxygenase 1 (.1) Potri.006G060300 [exp] 231 / 8e-73 AT1G19250 285 / 3e-91 flavin-dependent monooxygenase 1 (.1) Potri.006G137600 [exp] 228 / 3e-70 AT1G19250 699 / 0.0 flavin-dependent monooxygenase 1 (.1) Potri.001G335900 [exp] 216 / 3e-65 AT1G19250 630 / 0.0 flavin-dependent monooxygenase 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0063 [flax] [poplar] NADP_Rossmann PF00743 [flax] [poplar] FMO-like Flavin-binding monooxygenase-like
Representative CDS sequence Show only first row Show all	>Lus10023942 pacid=23160717 polypeptide=Lus10023942 locus=Lus10023942.g ID=Lus10023942.BGIv1.0 annot-version=v1.0 ATGGAAGCATGGGGGAAATGGGAAGTGGAAGTTATGAGAGGAGCGAGCTTTGAAGAGACGGAAGTTTACAAAGTCGGGTTTGTGATGCTCTGTGTAGGAA AGTACAGTGAGGTGCCTAATATTCCGGAATTCACTTCTGGAGAAGGTCCAGAAGTGTTCCGAGGAAAAGCGATTCATTCAATGGAGTATACTGATATGGG AGCTGTGGAGTCTAGGAAGTTGGTGAAGGAGAAAAGAATCGCTATCGTCGGGTTGCAGAAACATGCTATGGATATAGCCATGGAATGCTACCGAATAATG AGATGGGCTATCTCAAAGTTTGTGCAGAGTGACATCAGGCACAAGCATCAACTGGCGAAGCGCGGAATGGTAACGAAGCACAGGTTTATTCAGGACATAA GTTCGTGTCTGATCGCTACAGTCCCTGACAAATTCTACAACAAGGTCGAAGAGGGGAGCATCATAATGAGGAAAGCTCCAACCTTTAGTTTCTGCAAGGA AGGGATAATTGTCAAAGGTAGTCGAGATGACAAGGAGGAGCAGGTAGAGCGATTAGAGACCGATCTGGTGATATTTGCAACAGGTTTCAAAGGCGAGAAG AAACTCCAAGACATCTTCCGATTGAAAAAGTTTAGGGAACTTATCGTCGGCTCTCCAAATGCTGCCATGCCCCTTTACAGGGACTGCATTCCTCCGCGAA TCCCACAACTTGGGGTGTTAGGGTTCTCGGAGAGCCTGTCGAACCTGTTCACTTCGGAGATGAGGTGCGTGTGGCTGATGGAGCTTCTCGACGGAAAGTT TAAGCTTCTGAAGATCGAGGAGATGGAGAAGGATGCCGAGAGGTGGGATGGGTATCTCAAGGAATATGGAGGGAAGTACTACAAGAGGCCGTGCATTGGC GCCTTGCATATATGGCATAACGACCAGCTTTGCAAGGACATGGGCTGGAATCCGAGGCGGAAGAGTGGGATTTGGGCCGAATTGTTCGAGCCTTACAGAC CGTCGGACTACATGTCACCTCAATCAGGAAGTAAACCACAAAAGAAAACTATATAG
AA sequence Show only first row Show all	>Lus10023942 pacid=23160717 polypeptide=Lus10023942 locus=Lus10023942.g ID=Lus10023942.BGIv1.0 annot-version=v1.0 MEAWGKWEVEVMRGASFEETEVYKVGFVMLCVGKYSEVPNIPEFTSGEGPEVFRGKAIHSMEYTDMGAVESRKLVKEKRIAIVGLQKHAMDIAMECYRIM RWAISKFVQSDIRHKHQLAKRGMVTKHRFIQDISSCLIATVPDKFYNKVEEGSIIMRKAPTFSFCKEGIIVKGSRDDKEEQVERLETDLVIFATGFKGEK KLQDIFRLKKFRELIVGSPNAAMPLYRDCIPPRIPQLGVLGFSESLSNLFTSEMRCVWLMELLDGKFKLLKIEEMEKDAERWDGYLKEYGGKYYKRPCIG ALHIWHNDQLCKDMGWNPRRKSGIWAELFEPYRPSDYMSPQSGSKPQKKTI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G45180			Flavin-binding monooxygenase f...		Lus10023942 [exp]	0	1
AT1G56290			CwfJ-like family protein (.1)		Lus10008172 [exp]	6.6	0.7675
AT1G59970			Matrixin family protein (.1)		Lus10037418 [exp]	9.9	0.7023
AT5G55930		ATOPT1	ARABIDOPSIS THALIANA OLIGOPEPT...		Lus10035123 [exp]	15.6	0.7564
AT5G60900		RLK1	receptor-like protein kinase 1...		Lus10000422 [exp]	16.4	0.7580
AT5G60740		ABCG28	ATP-binding cassette G28, ABC ...		Lus10016115 [exp]	19.2	0.7233
AT5G16460			Putative adipose-regulatory pr...		Lus10026836 [exp]	20.9	0.6661
					Lus10009375 [exp]	21.9	0.6419
					Lus10030789 [exp]	22.1	0.7519
AT2G36780			UDP-Glycosyltransferase superf...		Lus10023894 [exp]	24.0	0.7504
AT1G78780			pathogenesis-related family pr...		Lus10027315 [exp]	26.3	0.6321

Compare expression of checked genes

Lus10023942 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.