Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G16980 387 / 3e-131 Major facilitator superfamily protein (.1.2) AT2G16990 374 / 2e-126 Major facilitator superfamily protein (.1.2) AT2G16970 353 / 2e-118 MEE15 maternal effect embryo arrest 15, Major facilitator superfamily protein (.1) AT5G42210 224 / 4e-70 Major facilitator superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025087 [exp] 798 / 0 AT2G16980 405 / 3e-138 Major facilitator superfamily protein (.1.2) Lus10005626 [exp] 513 / 0 AT2G16980 396 / 4e-135 Major facilitator superfamily protein (.1.2) Lus10004157 [exp] 496 / 2e-173 AT2G16980 394 / 2e-133 Major facilitator superfamily protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G178600 [exp] 572 / 0 AT2G16980 417 / 2e-143 Major facilitator superfamily protein (.1.2) Potri.009G138900 [exp] 538 / 0 AT2G16990 405 / 1e-138 Major facilitator superfamily protein (.1.2) Potri.005G245900 [exp] 493 / 3e-173 AT2G16980 412 / 3e-141 Major facilitator superfamily protein (.1.2) Potri.002G016200 [exp] 479 / 9e-168 AT2G16980 384 / 5e-130 Major facilitator superfamily protein (.1.2) Potri.008G022100 [exp] 266 / 1e-84 AT2G16980 211 / 3e-63 Major facilitator superfamily protein (.1.2) Potri.010G237300 [exp] 253 / 2e-79 AT2G16980 203 / 3e-60 Major facilitator superfamily protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10023994 pacid=23160674 polypeptide=Lus10023994 locus=Lus10023994.g ID=Lus10023994.BGIv1.0 annot-version=v1.0 ATGGAGAAGATGAGGGAGTTGGGGCATCTCTTGATGACGGTGTTCCTGTCGGCGTCGTCCTCCATCATGGTGTTCCCGGCCATCACCGACGTCACCATGG CGGCCCTCTGCCCCGGCCAGGAAGAGTGCTCCCTCGCCATTTACCTCTCCGGCTTCCAGCAAGCTGTGATAGGGTTAGGGACGGTGGTGATGATGCCAGT GATTGGTAATTTGTCGGACAAGTATGGACGCAAGGCTTTGCTCACTTTCCCTTTGACACTCTCCATTTTCCCTCTTGTAATATTGGCATATAGCAGATCA ACAGAGTACTTCTATGCATACTACATTCTCAGAACACTCACTGCCATGCTCTCCGATGGCAGCACTAACTGCCTCGCCCTTGCTTATGTGGCGGACAACG TTTCCGAATCGAAAAGGACAGCAGCATTCGGGATCCTGGCTGGTGTTGGATCGGCTGCTTTTGTGTGTGGAACCTTGGCCGCTCGTTTCCTCTCCACTGG ATTGGCTTTCCAAGTTGCTGCAGCTTTGTCCATGGTTGCAGCTGTGTACATGAGGATCTTCCTCAAGGACGACAAGCAATCCGAAACCGGAGATTATTTG ACTCAGCCGATCTTGAAAAAAGTGTTGTCCGAAGAAGACGGTGAACAAAGCTGTGTTCTTTCTAACAAGGTGGCCTTCAAGACATTTCCATCTGTTGGCG ACCTTGTCTCCTTGCTTAAGACCAGTGTGACATTTACTCAGGCAGCCGTTGTCACATTCTTCCAGAGTCTTGCTGATGGTGGATCGCAAGCTGCCATGTT GTACTACTTGAAGGCAAGGTTTCACTTCAGCAAGAACCAGTATGCTGATCTGATGCTGATTGCTAGTCTTACAGGAATGGTGTCTCAGCTGATCCTGATG CCGATATTGGCGCCATTTGTAGCAGAACGGAAGCTACTGTCAGTAGGCCTGTTAGTAGGGTGTGCAAATACTCTTGTTCTCAGCATTGCATGGTCTGACT GGGTCCCATACGCAACCGGTGTATTTGCTGCAGTTGCAGTTCTTGCAACTCCTTGTTTGCGTAGCATCGCCTCGAAGCAAGTTGGATCAAGGGACCAGGG GAAAGCTCAAGGATGCCTTTCAGGGATAAGTTCCATTGGCAGCATCATTTCTCCACTAATCTTTAGCCCTTTGACAGCTATGTTTCTTTCTGAACAACCA CCATTTGACTTCCCTGGATTCAGCGTTTTGTGCATCGGATTCATGACGATGATTGCCCTGATCCAGAGCCTTATGATAAAGGCTGACGATCATCCGGTTT CGACTGACATGAGTAGCGACTCTCCAGAAGCCATAGTTGTAGTCTCTTGA
AA sequence Show only first row Show all	>Lus10023994 pacid=23160674 polypeptide=Lus10023994 locus=Lus10023994.g ID=Lus10023994.BGIv1.0 annot-version=v1.0 MEKMRELGHLLMTVFLSASSSIMVFPAITDVTMAALCPGQEECSLAIYLSGFQQAVIGLGTVVMMPVIGNLSDKYGRKALLTFPLTLSIFPLVILAYSRS TEYFYAYYILRTLTAMLSDGSTNCLALAYVADNVSESKRTAAFGILAGVGSAAFVCGTLAARFLSTGLAFQVAAALSMVAAVYMRIFLKDDKQSETGDYL TQPILKKVLSEEDGEQSCVLSNKVAFKTFPSVGDLVSLLKTSVTFTQAAVVTFFQSLADGGSQAAMLYYLKARFHFSKNQYADLMLIASLTGMVSQLILM PILAPFVAERKLLSVGLLVGCANTLVLSIAWSDWVPYATGVFAAVAVLATPCLRSIASKQVGSRDQGKAQGCLSGISSIGSIISPLIFSPLTAMFLSEQP PFDFPGFSVLCIGFMTMIALIQSLMIKADDHPVSTDMSSDSPEAIVVVS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G16980			Major facilitator superfamily ...		Lus10023994 [exp]	0	1
AT1G06620			2-oxoglutarate (2OG) and Fe(II...		Lus10040380 [exp]	2.0	0.9071
AT5G67140			F-box/RNI-like superfamily pro...		Lus10039564 [exp]	3.7	0.9042
AT2G20680		MAN2, AtMAN2	endo-beta-mannase 2, Glycosyl ...		Lus10018598 [exp]	5.5	0.8951
AT1G17950	MYB	AtMYB52, BW52, ...	myb domain protein 52 (.1)		Lus10028638 [exp]	6.0	0.8977
AT2G31350		GLX2-5	glyoxalase 2-5 (.1.2)		Lus10018625 [exp]	6.0	0.8563
AT4G33040			Thioredoxin superfamily protei...		Lus10013519 [exp]	6.0	0.8958
AT2G29670			Tetratricopeptide repeat (TPR)...		Lus10040683 [exp]	7.7	0.8527
AT1G05170			Galactosyltransferase family p...		Lus10021538 [exp]	7.9	0.8520
AT4G15530		PPDK	pyruvate orthophosphate dikina...		Lus10012770 [exp]	8.0	0.8908
					Lus10008674 [exp]	8.4	0.8885

Compare expression of checked genes

Lus10023994 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.