Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G03210 129 / 5e-36 ATFUT2, FUT2 fucosyltransferase 2 (.1) AT2G03220 121 / 5e-33 ATFUT1, ATFT1, FT1, MUR2 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) AT1G14070 117 / 8e-32 FUT7 fucosyltransferase 7 (.1) AT1G14110 117 / 1e-31 ATFUT9, FUT9 fucosyltransferase 9 (.1) AT1G14080 112 / 9e-30 ATFUT6, FUT6 fucosyltransferase 6 (.1) AT1G14100 112 / 1e-29 FUT8 fucosyltransferase 8 (.1) AT2G15350 109 / 6e-29 ATFUT10, FUT10 fucosyltransferase 10 (.1) AT2G15390 109 / 1e-28 ATFUT4, FUT4 fucosyltransferase 4 (.1.2) AT2G15370 108 / 2e-28 ATFUT5, FUT5 ARABIDOPSIS FUCOSYLTRANSFERASE 5, fucosyltransferase 5 (.1) AT1G74420 64 / 1e-12 ATFUT3, FUT3 fucosyltransferase 3 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041641 [exp] 285 / 3e-95 AT1G14100 426 / 5e-144 fucosyltransferase 8 (.1) Lus10008696 [exp] 142 / 2e-40 AT2G03220 504 / 3e-174 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10037152 [exp] 127 / 9e-36 AT2G03220 564 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10029049 [exp] 124 / 5e-34 AT2G03220 450 / 5e-153 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10036776 [exp] 122 / 2e-33 AT2G03220 659 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10026128 [exp] 104 / 7e-27 AT2G03220 395 / 4e-132 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10041642 [exp] 103 / 3e-26 AT2G03220 454 / 8e-155 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10026125 [exp] 96 / 2e-24 AT2G03210 305 / 6e-100 fucosyltransferase 2 (.1) Lus10008693 [exp] 96 / 2e-24 AT2G03210 305 / 6e-100 fucosyltransferase 2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G191401 [exp] 147 / 6e-42 AT2G03220 555 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.003G191301 [exp] 140 / 1e-39 AT2G03220 524 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.003G191500 [exp] 139 / 2e-39 AT2G03220 570 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.001G034100 [exp] 137 / 6e-39 AT2G03220 560 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.008G090000 [exp] 129 / 8e-36 AT2G03220 744 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.003G191200 [exp] 127 / 3e-35 AT2G03220 570 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.001G033800 [exp] 127 / 7e-35 AT2G03220 524 / 3e-180 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03254 [flax] [poplar] XG_FTase Xyloglucan fucosyltransferase
Representative CDS sequence Show only first row Show all	>Lus10024079 pacid=23141520 polypeptide=Lus10024079 locus=Lus10024079.g ID=Lus10024079.BGIv1.0 annot-version=v1.0 ATGTACTCAAACAAACCAACTGTGACTGGTGAAGTCATCAGGTTTTACCAACCAAGCCATGAGGAGACACAGAAGTTTAAGGACAGTGATCACAACATCA AGGCATTGGTTGAGATATATCTGCTTAGCATGTGCGAGAAGTTAGTGATCAGCTCGAAGTCAACATTTGGGTATGTAGCTCAGGGTTTAGGGGATACCAA GGCATGGGTCCTGAGACGGCCGGGAGACGGTGCTTCTGATCCTTGTGTGAGAGACTTGTCACCAGATCCATGCTTTCACTATCCTCCAACGAGGAGCTGT AATGTTGGTAGTAACAAGAACAACAACAGATATGTTGATGTTGCTGATCATGTTCCCTATATGAAGCATTGCAAGGACCAGAAGATCGGAGTGAAGCTAG TCGATATTCATAAGGAGTTGTAG
AA sequence Show only first row Show all	>Lus10024079 pacid=23141520 polypeptide=Lus10024079 locus=Lus10024079.g ID=Lus10024079.BGIv1.0 annot-version=v1.0 MYSNKPTVTGEVIRFYQPSHEETQKFKDSDHNIKALVEIYLLSMCEKLVISSKSTFGYVAQGLGDTKAWVLRRPGDGASDPCVRDLSPDPCFHYPPTRSC NVGSNKNNNRYVDVADHVPYMKHCKDQKIGVKLVDIHKEL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G03210		ATFUT2, FUT2	fucosyltransferase 2 (.1)		Lus10024079 [exp]	0	1
AT2G26920			Ubiquitin-associated/translati...		Lus10024080 [exp]	2.6	0.5666
AT2G21090			Pentatricopeptide repeat (PPR-...		Lus10027836 [exp]	7.1	0.5360
AT2G38660			Amino acid dehydrogenase famil...		Lus10034187 [exp]	26.1	0.4863
AT1G32260			unknown protein		Lus10035377 [exp]	61.6	0.4631
AT3G62770		ATATG18A	autophagy 18a, Transducin/WD40...		Lus10004501 [exp]	130.2	0.4440
AT4G17720			RNA-binding (RRM/RBD/RNP motif...		Lus10035919 [exp]	174.4	0.4269
AT5G42200			RING/U-box superfamily protein...		Lus10021842 [exp]	193.8	0.4020

Compare expression of checked genes

Lus10024079 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.