Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G79710 558 / 0 Major facilitator superfamily protein (.1) AT5G25050 502 / 2e-175 Major facilitator superfamily protein (.1) AT5G25040 440 / 1e-150 Major facilitator superfamily protein (.1.2.3) AT5G10820 340 / 1e-111 Major facilitator superfamily protein (.1) AT2G32040 154 / 1e-40 Major facilitator superfamily protein (.1) AT5G54860 107 / 5e-25 Major facilitator superfamily protein (.1) AT1G04570 91 / 2e-19 Major facilitator superfamily protein (.1) AT2G33280 73 / 9e-14 Major facilitator superfamily protein (.1) AT1G64890 70 / 1e-12 Major facilitator superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041620 [exp] 849 / 0 AT1G79710 644 / 0.0 Major facilitator superfamily protein (.1) Lus10003419 [exp] 536 / 0 AT5G25050 625 / 0.0 Major facilitator superfamily protein (.1) Lus10026893 [exp] 535 / 0 AT5G25050 628 / 0.0 Major facilitator superfamily protein (.1) Lus10026890 [exp] 354 / 2e-116 AT5G10820 558 / 0.0 Major facilitator superfamily protein (.1) Lus10006106 [exp] 162 / 2e-43 AT2G32040 721 / 0.0 Major facilitator superfamily protein (.1) Lus10010565 [exp] 155 / 3e-41 AT2G32040 721 / 0.0 Major facilitator superfamily protein (.1) Lus10037809 [exp] 105 / 4e-24 AT5G54860 630 / 0.0 Major facilitator superfamily protein (.1) Lus10017090 [exp] 82 / 2e-16 AT5G54860 391 / 3e-133 Major facilitator superfamily protein (.1) Lus10023708 [exp] 82 / 3e-16 AT1G04570 451 / 3e-154 Major facilitator superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G041600 [exp] 640 / 0 AT1G79710 586 / 0.0 Major facilitator superfamily protein (.1) Potri.018G017100 [exp] 569 / 0 AT5G25050 580 / 0.0 Major facilitator superfamily protein (.1) Potri.006G266000 [exp] 565 / 0 AT5G25050 579 / 0.0 Major facilitator superfamily protein (.1) Potri.006G265500 [exp] 402 / 8e-136 AT5G10820 620 / 0.0 Major facilitator superfamily protein (.1) Potri.018G017400 [exp] 400 / 8e-134 AT5G10820 612 / 0.0 Major facilitator superfamily protein (.1) Potri.010G085900 [exp] 164 / 3e-44 AT2G32040 650 / 0.0 Major facilitator superfamily protein (.1) Potri.011G137300 [exp] 116 / 5e-28 AT5G54860 633 / 0.0 Major facilitator superfamily protein (.1) Potri.011G137400 [exp] 114 / 3e-27 AT5G54860 609 / 0.0 Major facilitator superfamily protein (.1) Potri.019G043000 [exp] 101 / 7e-23 AT1G64890 488 / 3e-171 Major facilitator superfamily protein (.1) Potri.010G063800 [exp] 94 / 3e-20 AT1G04570 523 / 0.0 Major facilitator superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF03092 [flax] [poplar] BT1 BT1 family
Representative CDS sequence Show only first row Show all	>Lus10024099 pacid=23141502 polypeptide=Lus10024099 locus=Lus10024099.g ID=Lus10024099.BGIv1.0 annot-version=v1.0 ATGGAAGAAACCCACTTCGAGAGGAAGGGATTGGTTAAGGGTTTGGTGATGAGGCCGATACATTGGTTCAGAATGTTGGGGGACGAGCTGCACTGGAGCC TTGTGATGGGTGTTGTAGTTGTTTATGGGATCAGTCAGGGTTTCGGAGTGGGGCTTGTCCGAGTTAGTACCCAGTACTACATGAAGGACGATCAGAAGCT TCAACCCTCTGAAGCTCAGCTCTTTTTCGGCCTCCTTCAGCTTCCTTGGATTGTCAAGCCCTTGTGGGGCTTATTGACTGATACCCTTCCTGTTCTTGGC TATAGGAGGCGCCCCTATTTCATCTTTGCAGTGCCTGAAAAGAAATTTGTTTCAGGGTTTCTTACTGCTACCTCAATGCTGGTGGTATCACTGCAGCCCA ACTTGTCGCTTGCATTCGCCATGCTTTCTCTCATGTCAGGAAGTACTGGGATGGCTATATCAGATGTTACCATAGATGCCTGTGTAACACAGAGCATTGG AAACTACCCTTCTCTTGCTGGCGATATGCAAAGCTTATGTGGGATCTCCTCCTCCATTGGATCCTTGGTTGGCTTCTCACTCAGCGGCTTTCTTGTTCAC CTGGTCGGACCTAAGGGTGTGTTCGGGTTTCTGAGTGTTCCAGCAGGCCTGGTCATTATGGTTGGTGTGATGCTACGAGAAAGCAACACACAACGAATTG TGTATAGAGGGGTACACGAGAAGTTCCAAGATGCTGGTAAAGCAATGTGGAGAACACTAAAATGTCGCGAAGTGTGGAGGCCATGTTTATTTATGTTCTT GTCCATTTGTGTCAGCTTACACATTCATGAAGGGATGTTCTATTGGTACACTGATGCAGAGGACGGTCCATCTTTCTCGCAGGAGGTTGTGGGGTCCATA TTCTCTTTTGGTGCAATTGGCTCTCTCTCCGGCGTCCTCTTGTGCCAAAATTTTCTGAAGAACCATCCTCTACGGGACATAGTTTTTTGGTCCCAGCTAC TGTTTAGTATATCTGGATTACTGGATTTGATGTTGGTCTTGCGTATCAACTTGAAAATTGGTTTGCCCGATTATTTCTTTGTTGTCATTGACGAAGCTGT TACCAGGATGATTGGACGTGTTAAGTGGATGCCTCTCCTCGTACTGAGCTCCAAGCTTTGCCCTCCTGGTATAGAGGGCACCTTCTTTGCCCTGCTGATG TCAATCGACCATATAGGGCTGCTCATTGCCACTTGGCTTGGAGGTTTGGTATTGCATATGTTGAATGTCACAAGGACACAATTCGACAATCTTTGGTTTG CACTTTTGATCCGAAGCATGATGAGGCTGCTTCCACTTGCCCTTCTTTTCCTCATCCCGAGGAGTGATCCTAACTTGTCTGTTCTTCCAGCAGAGATGTT GAAGATAAAAAAGGGTGACGACGATCTACCTGAAAACCAGAACCTTGAGATGGCTTCCCTTATCGACAGCACTTGA
AA sequence Show only first row Show all	>Lus10024099 pacid=23141502 polypeptide=Lus10024099 locus=Lus10024099.g ID=Lus10024099.BGIv1.0 annot-version=v1.0 MEETHFERKGLVKGLVMRPIHWFRMLGDELHWSLVMGVVVVYGISQGFGVGLVRVSTQYYMKDDQKLQPSEAQLFFGLLQLPWIVKPLWGLLTDTLPVLG YRRRPYFIFAVPEKKFVSGFLTATSMLVVSLQPNLSLAFAMLSLMSGSTGMAISDVTIDACVTQSIGNYPSLAGDMQSLCGISSSIGSLVGFSLSGFLVH LVGPKGVFGFLSVPAGLVIMVGVMLRESNTQRIVYRGVHEKFQDAGKAMWRTLKCREVWRPCLFMFLSICVSLHIHEGMFYWYTDAEDGPSFSQEVVGSI FSFGAIGSLSGVLLCQNFLKNHPLRDIVFWSQLLFSISGLLDLMLVLRINLKIGLPDYFFVVIDEAVTRMIGRVKWMPLLVLSSKLCPPGIEGTFFALLM SIDHIGLLIATWLGGLVLHMLNVTRTQFDNLWFALLIRSMMRLLPLALLFLIPRSDPNLSVLPAEMLKIKKGDDDLPENQNLEMASLIDST

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G79710			Major facilitator superfamily ...		Lus10024099 [exp]	0	1
AT5G47910		ATRBOHD, RBOHD	respiratory burst oxidase homo...		Lus10016740 [exp]	1.0	0.8676
AT5G39785			Protein of unknown function (D...		Lus10007264 [exp]	9.0	0.8019
AT4G01290			unknown protein		Lus10036389 [exp]	12.2	0.7625
AT3G28450			Leucine-rich repeat protein ki...		Lus10030812 [exp]	12.3	0.6786
AT2G20010			Protein of unknown function (D...		Lus10034947 [exp]	13.6	0.7701
AT1G63430			Leucine-rich repeat protein ki...		Lus10001489 [exp]	13.7	0.8119
AT5G51060		ATRBOHC, RHD2	ROOT HAIR DEFECTIVE 2, A. THAL...		Lus10016739 [exp]	13.9	0.7646
AT4G36190			Serine carboxypeptidase S28 fa...		Lus10041817 [exp]	17.0	0.7825
AT3G09830			Protein kinase superfamily pro...		Lus10013811 [exp]	20.8	0.7304
AT5G03540		ATEXO70A1	exocyst subunit exo70 family p...		Lus10034151 [exp]	21.8	0.7649

Compare expression of checked genes

Lus10024099 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.