Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G05675 366 / 6e-123 UDP-Glycosyltransferase superfamily protein (.1) AT1G05680 361 / 7e-121 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT2G31790 340 / 9e-113 UDP-Glycosyltransferase superfamily protein (.1) AT2G43820 340 / 1e-112 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT2G43840 330 / 1e-108 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT2G31750 328 / 8e-108 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT1G24100 315 / 5e-103 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT3G21560 240 / 1e-73 UGT84A2 UDP-Glycosyltransferase superfamily protein (.1) AT1G05560 239 / 2e-73 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) AT4G15480 237 / 3e-72 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10024117 [exp] 471 / 3e-163 AT1G05675 385 / 4e-130 UDP-Glycosyltransferase superfamily protein (.1) Lus10039041 [exp] 404 / 2e-137 AT1G05675 343 / 3e-114 UDP-Glycosyltransferase superfamily protein (.1) Lus10010468 [exp] 396 / 1e-134 AT1G05675 368 / 7e-124 UDP-Glycosyltransferase superfamily protein (.1) Lus10008742 [exp] 381 / 2e-128 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10003809 [exp] 370 / 4e-124 AT1G05675 337 / 1e-111 UDP-Glycosyltransferase superfamily protein (.1) Lus10006352 [exp] 352 / 2e-117 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10010712 [exp] 333 / 7e-110 AT1G24100 462 / 1e-160 UDP-glucosyl transferase 74B1 (.1) Lus10006353 [exp] 332 / 2e-109 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10017825 [exp] 327 / 3e-107 AT2G43840 392 / 2e-133 UDP-glycosyltransferase 74 F1 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G032300 [exp] 408 / 3e-139 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G032700 [exp] 403 / 4e-137 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032733 [exp] 403 / 4e-137 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140300 [exp] 398 / 2e-135 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032500 [exp] 398 / 3e-135 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.004G179300 [exp] 395 / 6e-134 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.001G389200 [exp] 394 / 9e-134 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.014G175000 [exp] 386 / 9e-131 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.015G071900 [exp] 352 / 2e-117 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1) Potri.007G117200 [exp] 336 / 3e-111 AT2G43840 461 / 1e-160 UDP-glycosyltransferase 74 F1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10024118 pacid=23141541 polypeptide=Lus10024118 locus=Lus10024118.g ID=Lus10024118.BGIv1.0 annot-version=v1.0 ATGAAGCTGGAACAGGAACAACTCCCGGCAGCCAGAAACCCTCATGTAATAGTCCTGCCATGCCCTGCACAGGGTCACATCAACCCAGCCCTACAATTCT CCAAACTCCTTGTCTCGAAAGGACTCAAAGTGACACTTGTCATCGCCACCCAAGTTGAGCTGGCCATATCCTGGCTCGGCTCGATACAAGTCGTTGTCCT CCCTACCTCCAATCCTGAAGAGGCAGATGATGAAGAAGAAGAAGACGAAAAAGAAGGTGATGTGGATCTGTTAAAGACATACCGGAAGAGAGTGAAGAAG GAACTTCCTGGAGTAGTTTCGGGACTCGAGGAAGGTGGGGAACGGGTGGCCTGCTTGGTGTACGACTCGATTATGCCGTGGGGTTTAGGTATTGCCAGGA AGCTGAACTTGGCTGGTGCTCCTTTCTTCACACAACCATGCGCTGTGGATGCTATCTTCTGCAGCCATTACGAAGGGACGCTGAAGATTCCGGTTGGGGA TGATAGAGATGTATGTGTGGAAGGGATGGGGCGAATGCTTGACCTCCATGACTTGCCTTGTCTGTTATATGAGACTGGGACGATGCCGGGTGCTTTGGAC TTGTTGTCTAGACAGTTCTCCACGGTCGCAGATGCTGATTGGGTTTTCTGCAACACCTTCAGTAGCTTGGAAGGACAGGTATTGGAGTATCTGCGTAGCC GATTCAAATTTATGGCAGTCGGTCCAACGATTCCGTCAATCTACTTATCAAGCAACAACGGAACGAAAGGTGCCGTGTCTCACGACTATGGGTTGAGTCT CTTCAAACCCAAACCAGACGAAGTTGATTACATGGATTGGCTGGACACAAAGGAACCGGGCTCTGTTGTCTACGTATCATTTGGGAGCCTGGCCACCTTG TCACACAAACAAACCCAAGAAATAGCCGCCGCGATGAAGATGATCGACAACCACCCGTTCCTATGGGTGGTTCGACAATCTGAACAGGACAAACTCCCCG AATATTTCGCGGACGAAACCTCGGGAAAAGGGATGGTGGTGACGTGGTGCAACCAGCTGGAAGTGTTGGCCCACAAGTCAACGGGATGTTTCGTGACTCA CTGCGGCTGGAACTCGACGATGGAGGCGTTGTGCTTAGGAGTGCCGATGGTGGGGGTGCCGCAGATGGCAGATCAAATGACCAACGCCAAATTCATATCG GACGTATGGGAAGTTGGGGTGAGGGCGAAGAGAGACGAGGAGGAGAAGATTGTCACGGGTGCAGAAGTTTGGTGGTGTATTAGCGAATTGATGGAAGGTG AGAGAGGGAAGGGTATTATGGGGAATGTGGAGAAATGGAAGAATCTGGCTAGGGCTGCTGTTGCTCCGGGTGGAAGTTCAGACAGAAACATTGATGAGTT CGTAGCTCAGCTCAAATCCGACAACTTTTGA
AA sequence Show only first row Show all	>Lus10024118 pacid=23141541 polypeptide=Lus10024118 locus=Lus10024118.g ID=Lus10024118.BGIv1.0 annot-version=v1.0 MKLEQEQLPAARNPHVIVLPCPAQGHINPALQFSKLLVSKGLKVTLVIATQVELAISWLGSIQVVVLPTSNPEEADDEEEEDEKEGDVDLLKTYRKRVKK ELPGVVSGLEEGGERVACLVYDSIMPWGLGIARKLNLAGAPFFTQPCAVDAIFCSHYEGTLKIPVGDDRDVCVEGMGRMLDLHDLPCLLYETGTMPGALD LLSRQFSTVADADWVFCNTFSSLEGQVLEYLRSRFKFMAVGPTIPSIYLSSNNGTKGAVSHDYGLSLFKPKPDEVDYMDWLDTKEPGSVVYVSFGSLATL SHKQTQEIAAAMKMIDNHPFLWVVRQSEQDKLPEYFADETSGKGMVVTWCNQLEVLAHKSTGCFVTHCGWNSTMEALCLGVPMVGVPQMADQMTNAKFIS DVWEVGVRAKRDEEEKIVTGAEVWWCISELMEGERGKGIMGNVEKWKNLARAAVAPGGSSDRNIDEFVAQLKSDNF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G05675			UDP-Glycosyltransferase superf...		Lus10024118 [exp]	0	1
AT4G24130			Protein of unknown function, D...		Lus10001674 [exp]	5.1	0.8818
AT1G61110	NAC	ANAC025	NAC domain containing protein ...		Lus10019926 [exp]	7.3	0.8933
AT4G10310		ATHKT1, HKT1	high-affinity K+ transporter 1...		Lus10030872 [exp]	8.1	0.8736
AT1G19630		CYP722A1	"cytochrome P450, family 722, ...		Lus10014285 [exp]	12.3	0.8807
AT5G16970		AT-AER	alkenal reductase (.1)		Lus10035274 [exp]	16.7	0.8699
AT5G28740			Tetratricopeptide repeat (TPR)...		Lus10003865 [exp]	16.9	0.7619
AT1G61110	NAC	ANAC025	NAC domain containing protein ...		Lus10026496 [exp]	19.7	0.8564
AT5G45290			RING/U-box superfamily protein...		Lus10016428 [exp]	25.3	0.8817
AT3G16340		ABCG29, ATPDR1,...	ATP-binding cassette G29, plei...		Lus10013123 [exp]	26.4	0.7707
AT3G47570			Leucine-rich repeat protein ki...		Lus10037310 [exp]	26.9	0.8764

Compare expression of checked genes

Lus10024118 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.