Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G22100 469 / 7e-164 Inositol-pentakisphosphate 2-kinase family protein (.1) AT5G42810 462 / 5e-161 ATIPK1 inositol-pentakisphosphate 2-kinase 1 (.1) AT1G58643 428 / 4e-147 Inositol-pentakisphosphate 2-kinase family protein (.1) AT1G59312 428 / 4e-147 Inositol-pentakisphosphate 2-kinase family protein (.1) AT1G58936 428 / 4e-147 Inositol-pentakisphosphate 2-kinase family protein (.1) AT1G59171 50 / 8e-08 Inositol-pentakisphosphate 2-kinase family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10010640 [exp] 616 / 0 AT1G22100 491 / 3e-172 Inositol-pentakisphosphate 2-kinase family protein (.1) Lus10033202 [exp] 59 / 4e-11 AT1G59171 81 / 6e-22 Inositol-pentakisphosphate 2-kinase family protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G230200 [exp] 577 / 0 AT5G42810 508 / 1e-178 inositol-pentakisphosphate 2-kinase 1 (.1) Potri.002G032900 [exp] 559 / 0 AT5G42810 494 / 2e-173 inositol-pentakisphosphate 2-kinase 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0016 [flax] [poplar] PKinase PF06090 [flax] [poplar] Ins_P5_2-kin Inositol-pentakisphosphate 2-kinase
Representative CDS sequence Show only first row Show all	>Lus10024274 pacid=23175029 polypeptide=Lus10024274 locus=Lus10024274.g ID=Lus10024274.BGIv1.0 annot-version=v1.0 ATGGATTTGAAGTTAGAAAAGGAAGATGCAGAAGATTGGATTTACAGAGGCGAAGGAGCTGCTAATCTCGTCCTCGCTTACTCTGGCTCTTCCCCTGTTT TCAAGGGGAAAGTGATGAGGATACAAAAGGTTGCTAGAAATGGATCTTCGGTGGTGCAGAATCAGCCTGTATTGACAGAGCAAGAACGTCTTCTGTGGAA AGAAACCAAGGAGCTGTCTGCATCTCCTAATAAAGAAGTTGCTGAGCGGCTTTTTGCTCATCTAGTGATGGGCCCTCTCTTGGGTCCCAAGCACGTTGAT GCTGGGGTGCTTGCTAGAGTGTCTAGGGAATTTCTGGATTGCATTGAAAAGAAAGTGATTTGTCAGCGTCCGGCTTGGCGAGTTGATGCTGCTAAAGTTG ATGCACAACGTGATTCTGTGCTCATTATGTCTGATCATACCCTCTTTCCTCATGGTGATGTAGGTAATGGCGGACCCTGCATATCAGTTGAAATTAAGCC TAAGTGTGGGTTTCTGCCATCATCAAGCTTTATTGCTGAAGGAAATGCTGTTAAAAAGAGCACAACTCGTTTTATAATGCATCAAGCCCTAAAGCTACGC AACAAAGAGATAACAGAAATAAGCAAGTACAATCCACTGGATCTGTTTTCTGGGTCCAAGGAAAGAATACATAAAGCTATCAAGGATCTATATTCCACTC CTCAGAATAATTTCCGGGTATTCTTGAATGGTTCTCTTATATTTGGAGGCTTGGGCGGAGGCATAAGCAAAACAAACAAAGCAATTGAACAAGCTTTTGA AGAGACCCTAAAGAGTACTACTATACAGGCTGGTGAAGGTTCTCGAGCTTCAAGTTTGATGCAGCTTGTTGCAGAGACAGTTCACCGGTCTCGAGTGCTT GATCAACTTCTGAAAGCCCAGAAGCTTGACCTTTCTGACATTGAAGGAGCAATTCATGCATATTACAATGTTGTTTCCAAGCCTTGCATTGTATGCCGGA ACTTGAATGAAGCAAAATTGCTGCATACATGTGCATCCTTGCACTCGATTCCCATGGATAAGAGCTTGAAAATTGTGAAGGATTATTTGATAGCTGCCAC TGCAAAGGACTGTAGTCTAATGATCAGTTTTACACCAAGTGATGGGAATGTTGGATCTCAATATAGCTCTATTCATTTACCTTCAACCAATCAAAAGTTT GATTACAAGGTGAATTTCATCGACTTGGATATGAAACCTTTAAAGAATATAGAAGACTACTATGAACTGGACCAGAAGATAGTGAAGTGTTACAGTCAGA TGGTAGGAGGAGATCCTAGAAAGGGAAATTGTGCAAGCACCGGCGTCAATGGAGCTGTAAACTAA
AA sequence Show only first row Show all	>Lus10024274 pacid=23175029 polypeptide=Lus10024274 locus=Lus10024274.g ID=Lus10024274.BGIv1.0 annot-version=v1.0 MDLKLEKEDAEDWIYRGEGAANLVLAYSGSSPVFKGKVMRIQKVARNGSSVVQNQPVLTEQERLLWKETKELSASPNKEVAERLFAHLVMGPLLGPKHVD AGVLARVSREFLDCIEKKVICQRPAWRVDAAKVDAQRDSVLIMSDHTLFPHGDVGNGGPCISVEIKPKCGFLPSSSFIAEGNAVKKSTTRFIMHQALKLR NKEITEISKYNPLDLFSGSKERIHKAIKDLYSTPQNNFRVFLNGSLIFGGLGGGISKTNKAIEQAFEETLKSTTIQAGEGSRASSLMQLVAETVHRSRVL DQLLKAQKLDLSDIEGAIHAYYNVVSKPCIVCRNLNEAKLLHTCASLHSIPMDKSLKIVKDYLIAATAKDCSLMISFTPSDGNVGSQYSSIHLPSTNQKF DYKVNFIDLDMKPLKNIEDYYELDQKIVKCYSQMVGGDPRKGNCASTGVNGAVN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G22100			Inositol-pentakisphosphate 2-k...		Lus10024274 [exp]	0	1
AT3G07360		ATPUB9	ARABIDOPSIS THALIANA PLANT U-B...		Lus10009594 [exp]	3.3	0.8075
AT1G05070			Protein of unknown function (D...		Lus10015556 [exp]	3.5	0.6980
AT1G21980		ATPIPK1, ATPIP5...	phosphatidylinositol-4-phospha...		Lus10018200 [exp]	8.9	0.7233
AT5G10310			unknown protein		Lus10025740 [exp]	13.7	0.7426
AT2G20410			RNA-binding ASCH domain protei...		Lus10042558 [exp]	13.7	0.7305
AT2G14045			unknown protein		Lus10042548 [exp]	16.1	0.6943
AT3G53900		UPP, PYRR	PYRIMIDINE R, uracil phosphori...		Lus10024350 [exp]	19.0	0.7443
AT3G15130			Tetratricopeptide repeat (TPR)...		Lus10007682 [exp]	24.5	0.6549
AT1G06450			Polynucleotidyl transferase, r...		Lus10017894 [exp]	28.6	0.7028
AT5G17520		MEX1, RCP1	MALTOSE EXCESS 1, root cap 1 (...		Lus10020364 [exp]	29.0	0.6937

Compare expression of checked genes

Lus10024274 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.