Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G16310 1410 / 0 LDL3 LSD1-like 3 (.1) AT3G10390 324 / 3e-93 FLD FLOWERING LOCUS D, Flavin containing amine oxidoreductase family protein (.1) AT1G62830 320 / 4e-92 ATLSD1, ATSWP1, LDL1, SWP1 ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, LSD1-like 1 (.1) AT3G13682 306 / 2e-88 LDL2 LSD1-like2 (.1) AT1G65840 235 / 1e-66 ATPAO4 polyamine oxidase 4 (.1) AT3G59050 228 / 3e-64 ATPAO3 polyamine oxidase 3 (.1) AT2G43020 227 / 6e-64 ATPAO2 polyamine oxidase 2 (.1) AT4G29720 145 / 6e-36 ATPAO5 polyamine oxidase 5 (.1) AT5G13700 95 / 1e-19 ATPAO1, APAO polyamine oxidase 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033928 [exp] 2836 / 0 AT4G16310 1391 / 0.0 LSD1-like 3 (.1) Lus10017464 [exp] 332 / 1e-95 AT3G10390 1198 / 0.0 FLOWERING LOCUS D, Flavin containing amine oxidoreductase family protein (.1) Lus10015996 [exp] 323 / 1e-93 AT1G62830 988 / 0.0 ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, LSD1-like 1 (.1) Lus10012283 [exp] 321 / 5e-93 AT1G62830 984 / 0.0 ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, LSD1-like 1 (.1) Lus10037885 [exp] 286 / 2e-81 AT3G13682 969 / 0.0 LSD1-like2 (.1) Lus10038587 [exp] 285 / 4e-81 AT3G13682 971 / 0.0 LSD1-like2 (.1) Lus10028817 [exp] 259 / 4e-74 AT3G10390 808 / 0.0 FLOWERING LOCUS D, Flavin containing amine oxidoreductase family protein (.1) Lus10029804 [exp] 216 / 4e-60 AT2G43020 790 / 0.0 polyamine oxidase 2 (.1) Lus10020726 [exp] 216 / 4e-60 AT2G43020 794 / 0.0 polyamine oxidase 2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G235400 [exp] 1394 / 0 AT4G16310 1192 / 0.0 LSD1-like 3 (.1) Potri.002G027100 [exp] 1377 / 0 AT4G16310 1504 / 0.0 LSD1-like 3 (.1) Potri.008G035200 [exp] 335 / 5e-97 AT3G10390 1152 / 0.0 FLOWERING LOCUS D, Flavin containing amine oxidoreductase family protein (.1) Potri.010G227200 [exp] 332 / 8e-96 AT3G10390 1135 / 0.0 FLOWERING LOCUS D, Flavin containing amine oxidoreductase family protein (.1) Potri.002G013100 [exp] 314 / 1e-90 AT1G62830 964 / 0.0 ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, LSD1-like 1 (.1) Potri.011G127600 [exp] 303 / 3e-87 AT3G13682 959 / 0.0 LSD1-like2 (.1) Potri.004G075800 [exp] 222 / 3e-62 AT1G65840 728 / 0.0 polyamine oxidase 4 (.1) Potri.017G144001 [exp] 218 / 8e-61 AT1G65840 721 / 0.0 polyamine oxidase 4 (.1) Potri.002G055300 [exp] 216 / 3e-60 AT2G43020 809 / 0.0 polyamine oxidase 2 (.1) Potri.005G207300 [exp] 216 / 4e-60 AT2G43020 820 / 0.0 polyamine oxidase 2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0123 [flax] [poplar] HTH PF04433 [flax] [poplar] SWIRM SWIRM domain CL0063 [flax] [poplar] NADP_Rossmann PF01593 [flax] [poplar] Amino_oxidase Flavin containing amine oxidoreductase
Representative CDS sequence Show only first row Show all	>Lus10024311 pacid=23174925 polypeptide=Lus10024311 locus=Lus10024311.g ID=Lus10024311.BGIv1.0 annot-version=v1.0 ATGGGTGAAGGTGATTGTGATTTGCCGAATTCCGTGCTTGTTGAAGCTAACCTAGGGTTGCAGGAAGGTTTGCCAGCGGGAGTGGCTAGACCTAGGGCTG TGAAGATGGGGAGTGAGGACAAGAAGAAGCCTGGGTTAAAGAAGAGATTTAAGTCAATGGTGGAGAGTGGTGTCGATTCTGATGACGATGAACCGATTGG GAGTTTGTTGAAGCTGAAGAAGCCTAGGAATCCTAAGAAGGGTAAGGCAGTGTCCGGCAAGGCTTCAAAGGCTCGGAAAGTAATTGCTAAAGATGTGGAA TTTGGTGGGATGGATGATACATTAGCTAGTTTGAGGAAGAAATTGAAAGGTCCTAAGAAAGACATTGGATCTGTTGCAGCTAGGTGTTCAGATGTTGTTG TGGAGAAAGGGGTTGGAAACAAGCGCAAGAAGAAAGCAAAACTTGGCGAAGATGCAATGAAATTAGAGTGTGGCGAAGGTAGCAAAGCTATAGGACCTAC GGATGTTTGCTTCCAATTTAAGAAACGTGAAGGCACATTGGGTGGGGGAACTTCTGTGCATTCTTCAGATGTGAAACTGGTTGAGTCTCAATCGGTTTCT GCAGCACAGTCTGGCTCAGATCTGCATTACGAACCGAACAGAAGAACCCAAATTTTAGTGAATGGGATAAGCCCTACTTATCGAAGTAGGTTAGATTCTG CGTCTGAACAATGTAGGACAGTGAAAAACCAGATGCATCAAGATGGTGTTTTTTATAGGATCAAAGATGAAAAAAGGTTCGATTCTGGGGTCTTAGATTG TGTGGAAAGAGCTGAGGCAGATCCCTGTTGCTCTCACAAAATTTGCGATGATAATTGCTCTTTTTCGGAACAGAAAGGTAGTTCCAACAATAAAACATTT GAAGATGGTGGACAGCTTTCCAGAGACAGCATATTGGTTCCTGCAGTCCATGGAGTTGCTTATCCCAAATCTTCTTCTATGCAGAATACGACCACATGTA GTATTGCTGAATTCAATTCCAAGAGTAAGTGCACAAAGACATTGGATGAGAAATTTGAGAATGCCATCACTGAGCCTGTAGTAAATGGTTCTGGTGAAAG AGAAATTCTATCAACGCTTGATGACAATGTGTTGTTGAATCATCCAAGTGATGTCTCCCCCGATAGTATTCGGGCGAAGGAAACTGTTGAACTGGGGAGT CTGCCTGTTGAAGTCAAGTGTGAAAAGGATTCTTTCAGCCAACACCCATATACTGCCCAGCCTTCTCGTTCCCATGTAGAAGACTCCAAATTCGTGTTAG CAGATGTTGAGGAACCTTTTAATCATAATGATACCTTACCTGATGGCCATGATATAGTTTATGTTTCTCCTAAAAGAGAAGCAGCTAAAACACCCGATGG TAGCTCAACCCCGATTGGTGAAACAGCCCGTGAAGTCCAGAAATCAGAATCTAATCTCCTGATGAGCTGCACAGAGAATTCTCTGGATACAGATGTTGAT CCACACAACTCCACTGCATCCATTCAAAAGGGAAGCCCCGGTTTGTTACAAAATCAACTTTCTCACAATGAAACCAAGCAGCATTCTGCCCCAGGCCGTG AACATCATTCCATTAATGAAGGAGTTGATGGAGGCTCTCCTGGATCTTTAGCAGCAGAGGAAAATTGCAGCTTTCAGGACGATACAGCATCTGTTCCTGA TTCTGAAATCAAAGATGGAAAATTATCAGCTAAGCAACGTGCTGTGCGTCAAGCAAAAAAGCGGAGGCATGAAGACATGGCTTATGAAGGGGATGTAGAT TGGGAAGTTCTAATAAATGGGCAGAGATTTCTGGATGAGGAAATTTTGGACAATTCGAGAACATACAGAATCAGAGAAAAGTTCGATTCCTCATCAGTAA GTGTTTCAGAGGTTGAGAATGATGGAGCTGCTGCAGTGTCTGCTGGACTGAAATCCTACGCTGCTGGTCCAGTTGAGAAAATAAAATTCAAAGATATCTT GAAACGCAAGTCTGGTATCCAAGAATATCTAGAATGCAGGAATAAGATCTTAAGTCTCTGGAGCAAGGATGTTACTCGTATATTGCCACTTTCTGAATGT GGTGTCACCGATATGCCTTCCGAGGCTGAATCTCAAGGTGCTTCACTAATTAGAGAAGTGTATTCGTATCTTGACCAGAGGGGATATATAAATGTTGGGA TTGCCTATGAGAAAAAGAAAGCCCAACCAGGTGCGAAGCATAATTATACGCTCTGTGGAGGGAAAGGTCTTGGTGGGAGTCCTAGCACCTCAGTTGCTGA AATGGATGACGGAGTCTCCTTTATCCTTGGTCAGGTCAAGGGTCGTAAGACTTCAATAGAGGTTAAGGATAGAGTCAGGAATGATAGCGAGAACCAAGGA TCAGAAAGAGAGCTTGTTACATCTAAGATAAGGTTATTTAATGTCCCAAAACCTGATGAGCTTCTATCTGATGATATCCAGCAAAACATTACTGGCGAAC CCAGATCATCTGATGGTGTTGTCTCTGCTATAACTCCTCAGTTAAGAGATGACCAGCAAAGTGGGCAATCTTCTCAAAATGATATAGAGAGAGGCCATTA TATGCCGTGTGATTCTCAAAATAAAAAGAGAATCTTAGTTATTGTTGTTGGTCCTGCTGGATTAACAGCTGCACGGCATCTACAGCGGCAGGGTTTCCAT GTTACTGTAATTGAGGCACGAAGTAGGATAGGCGGCCGTGTCCATACGGATCGGTCATCCTTTTCAGTTCCAGTAGATCTTGGTGCCAGCATTATTACTG GTGTTGAGGCGGATGTTGCAACTGAGAGGAGACCAGACCCTTCCTCTTTAATCTGTGCTCAGCTGGGCCTTGAGTTGACTGTTCTAAACAGCGACTGTCC ACTTTATGATATTGTGACGGGAGAAAAAGTGCCTACTGACCTGGATGAAGCATTGGAGGCAGAATTCAACAGTCTTCTTGATGACATGGTACCACTCATC TCACAGAAGGGGGAACTTGCTCTGAAGATGTCTCTGGAAGATGGATTAGAATATGCCCTTATGAAGCGGCGCTTAGCACATCCGAGGTCAGATATGGAAG GAATTGTATTGCAAGACTTTTCATGTGTTTCCACACAATGTAGTGCTGAAGAAGGGGCTGCCCCGAAAAGTTCTAGTGAAGAGATTTTAACTGCTTCTGA AAGGAGAGTTATGGATTGGCATTTTGCTAATTTGGAGTATGGCTGTGCCACTTTGCTGAAGCAAGTGTCACTTTCGCATTGGAATCAGGACGATGTATAT GGAGGATTTGGAGGAGCTCATTGCATGATTAAGGGGGGTTACAGTAATGTTGTGGAATCTCTTGCCGAAGGGCTGGTTATTCAACTGAACCATATAGTCA CTGAGATCTCATATGGTTCCATGGACACGGGTACAAATGATCCAAAAGTAAAAGTTTCCACATCAAATGGCACCGAGTTTAGTGGAGATGCTGTTCTTGT TACAGTGCCTCTTGGGTGTTTGAAAGCAGAAAGCATAAAGTTTTCCCCTTCCTTACCTCAATGGAAACAGTCTTCCATTCAGAGACTTGGTTATGGAGTC CTGAATAAAGTAGTCCTGGAATTTGAACGAGTTTTCTGGGATGATTCTGTGGATTACTTTGGGGCGACAGCAGAGGACACTGACAGTAGGGGGCACTGTT TTATGTTCTGGAATGTACGGAAAACTGTGGGAGCACCTGTTCTTATTGCCTTAGTTGTTGGCAAGGCTGCTATTGATGGCCAAAGTACATGCTCATCAGA TCACGTAAGTCATGCGGTGAAGACTCTTCGCAAACTTTTTGGAGTGGATTTAGTGCCAGATCCAGTTGCTTCAATGGTGACTGATTGGGGTAGAGATCCT TTCAGTTATGGTGCTTACTCTTATGTCGCCATAGGTTCATCTGGAGAAGACTATGATATATTGGGCAGACCTGTTGAGAACTGCTTATTTTTTGCTGGTG AAGCTACCTGCAAGGAGTATCCTGATACAGTTGGTGGTGCTATGATGAGTGGCCTTCGGGAGGCAGTACGGATAATTGACATAATAAGTACTGGAAATGA TTACACTGCTGAAGCAGAGGCTCTGGAGGCTGCAAAGAGACGGTTGGAACTTGAAAGAGATGAAGTTAGAGACATAATGAAGAGGCTTGAAGCTATGGAG CTATATACTATCATCTCCAAGAGTTCGGTAGCTTTACTACAGGAGATGTTTTTTGGTGCAAAAACCACTGCAGGAAGACTGCACCTTGCCAAGAAGTTGT TGAGTCTTCCTGCTGAAACCTTGAAGTCCTTTGCTGGTACCAAAAAAGGGTTATCGACCCTCAACTCCTGGATACTGGACTCGATGGGGAAGGATGGTAC TCAGCTTTTGCGTCATTGTGTTCGCATTCTTGTGCTGGTATCAACAGACTTACTTGCAGTGCGTTTGTCAGGCATTGGGAAGACAGTCAAAGAAAAAGTT TGTGTGCATACCAGTCGTGATATTCGTGCAATAGCAAGTCAGCTCGTTAGCGTCTGGCTTGAAGTGTTCCGCAGGGAGAAAGCTTCAAATCGTTTGAAGT TATCTCGACAAGCCACTGCACTTGATTCTTCAAGGAGAAAGTCCATTTTTAATCTGCTTACAGGGAAGCCACCTCTAAGTAGTCATCTTAATGGTCCGGA AAATAGGGGGGGCTTGCACTTACCTGCATCCTCTGCTGCTAGCCCATTGTTATCGGATACTAACATGAAGAATGTGAATGAAGAAGAAAAGGCGCCATTA GCTGCAGCTGAGGCTGCACAAGCTGCAGCTCGTGCAGCTGCTGAGGCTTATGCTAAGTGCAACACGATGGTGCACCTTCCTAAGATACCATCATTTCACA AGTTTGCAAAACGGGAACAATATCCACCTATGGATGAATATGATTGTAGGAAAAAATGGTCTAGTGGGGTCTTTGGGGGACAAGACTGTACATCTGAGAT AGACTCGAGGAACTGCAGAGTTAGGAACTGGTCAGTTGATTTTTCCGCTACTTGTGAGAACTTCAGTAATTCCAGATTGTCGATCGATAACTTATCTCAT AGAAGCCATTCAAACGAAATAGCCTCCCGTATGAACTTGGGAGAGCAGTCTGGAGAAAGTGCGGCTACTGGCAGCAGTCTGTATACAAAAGCATGGGTCG ATACAGCCGATGTTGGTGCTGTCAAGGGTTATCAAGCCATTGAGAGATGGCAATCTCAAGCAGCTGCTGCTGATTCAGAATTTTACCATCCTGATTTGCA TATAAACGATGAAGAGCATTCAAATACCAGTTCAAGACCACCTGCCTGGAGGAATGATAGACAAGCAAATGAGAGCTCTGTCTCACAAGTTACTGTAAAC AAGGAGACTTTAAAGAGCCACTCTCGTAGTGCTGACCGGATTAAACAGGCGGTTGTGGATTTTGTTGCATCATTACTCATGCCTGTTTACAAAGCACACA AAATTGATAGGGATGGATATAAATCTATAATGAAGAAATGTGCCACAAAGGTGATGGAGCGGGCTACTGATGCCGAGAAAGCAATGTCTGTTTCTGAATT TCTTGATTCCAAACGCAAGAATAAGATTCGGGCATTTGTTGATAAATTGATGGAGAGGCAAGTGGAAACAGAGCCAGCTGATAAACCGTGA
AA sequence Show only first row Show all	>Lus10024311 pacid=23174925 polypeptide=Lus10024311 locus=Lus10024311.g ID=Lus10024311.BGIv1.0 annot-version=v1.0 MGEGDCDLPNSVLVEANLGLQEGLPAGVARPRAVKMGSEDKKKPGLKKRFKSMVESGVDSDDDEPIGSLLKLKKPRNPKKGKAVSGKASKARKVIAKDVE FGGMDDTLASLRKKLKGPKKDIGSVAARCSDVVVEKGVGNKRKKKAKLGEDAMKLECGEGSKAIGPTDVCFQFKKREGTLGGGTSVHSSDVKLVESQSVS AAQSGSDLHYEPNRRTQILVNGISPTYRSRLDSASEQCRTVKNQMHQDGVFYRIKDEKRFDSGVLDCVERAEADPCCSHKICDDNCSFSEQKGSSNNKTF EDGGQLSRDSILVPAVHGVAYPKSSSMQNTTTCSIAEFNSKSKCTKTLDEKFENAITEPVVNGSGEREILSTLDDNVLLNHPSDVSPDSIRAKETVELGS LPVEVKCEKDSFSQHPYTAQPSRSHVEDSKFVLADVEEPFNHNDTLPDGHDIVYVSPKREAAKTPDGSSTPIGETAREVQKSESNLLMSCTENSLDTDVD PHNSTASIQKGSPGLLQNQLSHNETKQHSAPGREHHSINEGVDGGSPGSLAAEENCSFQDDTASVPDSEIKDGKLSAKQRAVRQAKKRRHEDMAYEGDVD WEVLINGQRFLDEEILDNSRTYRIREKFDSSSVSVSEVENDGAAAVSAGLKSYAAGPVEKIKFKDILKRKSGIQEYLECRNKILSLWSKDVTRILPLSEC GVTDMPSEAESQGASLIREVYSYLDQRGYINVGIAYEKKKAQPGAKHNYTLCGGKGLGGSPSTSVAEMDDGVSFILGQVKGRKTSIEVKDRVRNDSENQG SERELVTSKIRLFNVPKPDELLSDDIQQNITGEPRSSDGVVSAITPQLRDDQQSGQSSQNDIERGHYMPCDSQNKKRILVIVVGPAGLTAARHLQRQGFH VTVIEARSRIGGRVHTDRSSFSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDIVTGEKVPTDLDEALEAEFNSLLDDMVPLI SQKGELALKMSLEDGLEYALMKRRLAHPRSDMEGIVLQDFSCVSTQCSAEEGAAPKSSSEEILTASERRVMDWHFANLEYGCATLLKQVSLSHWNQDDVY GGFGGAHCMIKGGYSNVVESLAEGLVIQLNHIVTEISYGSMDTGTNDPKVKVSTSNGTEFSGDAVLVTVPLGCLKAESIKFSPSLPQWKQSSIQRLGYGV LNKVVLEFERVFWDDSVDYFGATAEDTDSRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQSTCSSDHVSHAVKTLRKLFGVDLVPDPVASMVTDWGRDP FSYGAYSYVAIGSSGEDYDILGRPVENCLFFAGEATCKEYPDTVGGAMMSGLREAVRIIDIISTGNDYTAEAEALEAAKRRLELERDEVRDIMKRLEAME LYTIISKSSVALLQEMFFGAKTTAGRLHLAKKLLSLPAETLKSFAGTKKGLSTLNSWILDSMGKDGTQLLRHCVRILVLVSTDLLAVRLSGIGKTVKEKV CVHTSRDIRAIASQLVSVWLEVFRREKASNRLKLSRQATALDSSRRKSIFNLLTGKPPLSSHLNGPENRGGLHLPASSAASPLLSDTNMKNVNEEEKAPL AAAEAAQAAARAAAEAYAKCNTMVHLPKIPSFHKFAKREQYPPMDEYDCRKKWSSGVFGGQDCTSEIDSRNCRVRNWSVDFSATCENFSNSRLSIDNLSH RSHSNEIASRMNLGEQSGESAATGSSLYTKAWVDTADVGAVKGYQAIERWQSQAAAADSEFYHPDLHINDEEHSNTSSRPPAWRNDRQANESSVSQVTVN KETLKSHSRSADRIKQAVVDFVASLLMPVYKAHKIDRDGYKSIMKKCATKVMERATDAEKAMSVSEFLDSKRKNKIRAFVDKLMERQVETEPADKP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G16310		LDL3	LSD1-like 3 (.1)		Lus10024311 [exp]	0	1
AT4G16310		LDL3	LSD1-like 3 (.1)		Lus10033928 [exp]	1.0	0.9732
AT3G08850		ATRAPTOR1B, RAP...	HEAT repeat ;WD domain, G-beta...		Lus10009083 [exp]	1.7	0.9601
AT4G34430		ATSWI3D, CHB3	SWITCH/SUCROSE NONFERMENTING 3...		Lus10023583 [exp]	3.2	0.9416
AT1G02080			transcription regulators (.1.2...		Lus10028176 [exp]	3.7	0.9613
AT1G73960		TAF2	TBP-associated factor 2 (.1.2)		Lus10016716 [exp]	3.7	0.9426
AT5G49430			WD40/YVTN repeat-like-containi...		Lus10037748 [exp]	4.9	0.9587
AT2G28290		CHR3, SYD	SPLAYED, CHROMATIN REMODELING ...		Lus10012798 [exp]	5.0	0.9578
AT1G02080			transcription regulators (.1.2...		Lus10042876 [exp]	6.2	0.9388
AT2G47330			P-loop containing nucleoside t...		Lus10037527 [exp]	6.3	0.9294
AT4G15180		SDG2, ATXR3	SET domain protein 2 (.1)		Lus10018496 [exp]	7.3	0.9457

Compare expression of checked genes

Lus10024311 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.