Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G05680 390 / 2e-132 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT1G05675 388 / 7e-132 UDP-Glycosyltransferase superfamily protein (.1) AT2G43840 382 / 3e-129 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT2G43820 377 / 2e-127 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT2G31750 347 / 1e-115 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT1G24100 343 / 3e-114 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT2G31790 327 / 6e-108 UDP-Glycosyltransferase superfamily protein (.1) AT4G15550 246 / 3e-76 IAGLU indole-3-acetate beta-D-glucosyltransferase (.1) AT1G05560 241 / 2e-74 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) AT4G15480 236 / 2e-72 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006353 [exp] 539 / 0 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10017825 [exp] 534 / 0 AT2G43840 392 / 2e-133 UDP-glycosyltransferase 74 F1 (.1.2) Lus10014148 [exp] 529 / 0 AT2G43840 407 / 2e-139 UDP-glycosyltransferase 74 F1 (.1.2) Lus10008742 [exp] 529 / 0 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006352 [exp] 518 / 0 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10006721 [exp] 513 / 0 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10020556 [exp] 409 / 1e-139 AT2G43820 472 / 1e-164 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10009412 [exp] 404 / 4e-138 AT2G43820 474 / 1e-165 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10006351 [exp] 391 / 4e-135 AT1G05680 315 / 9e-106 Uridine diphosphate glycosyltransferase 74E2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G175000 [exp] 485 / 8e-170 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.017G032300 [exp] 462 / 9e-161 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G032500 [exp] 444 / 2e-153 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032700 [exp] 438 / 2e-151 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032733 [exp] 438 / 2e-151 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140500 [exp] 432 / 8e-149 AT2G43840 463 / 3e-161 UDP-glycosyltransferase 74 F1 (.1.2) Potri.007G140300 [exp] 431 / 2e-148 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.001G389200 [exp] 422 / 6e-145 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.004G179300 [exp] 419 / 8e-144 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.015G071900 [exp] 395 / 2e-134 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10024486 pacid=23170251 polypeptide=Lus10024486 locus=Lus10024486.g ID=Lus10024486.BGIv1.0 annot-version=v1.0 ATGGCGGCGGAACCCTTAACACCCTCAAGACACTGCGTAGTAGTTCCTTTCCCAGCACAAGGACACATCAATCCAATCCTTCAATTCTGCAAGCGCCTAA CCCCAAAAGGAATCCATGTCACTATAGATCTTACTCGCTTCATCGCCTCAACGATCACCCCCACCGCTACCGCCGGCTTATCCAAAGTCCGCCTTGATAC CATTTCCGATGGATATGACAAGGCCGGCATAATGGCGGCCGAGAGCGTCCAAGTCTACATGGACACATTCCAAGAAAGTGATGCAGGGGATCCCGTGCAC TGCATTGTATACGATTTTTGCCTTCCTCGGTGCATCCATGTCGCCGAGAGGTTCGGAGTGATGGGAGCTGCTTTCTTGACGCAATCGTGTGCTGTTGATT CCATCTACAACCATGTCCGCAATGGATTACTGAAGACTCCCGTTGTACCAGATGTTGGTGATGGAAGTTTGAAACTAATTGTTCCAGGGCTGCCGCCATT AGAGCCTCGAGATTTTCCTTCTTTTGTGACAAAGTCTGAACAAAAGTACGATGGAGTTTTGGATTTGTTCATTGAACAGTTTTCCAATCTTGACAACGCC GACTGGGTTCTCTGCAATACTGTCTACGAGCTGGAACAAGAGGGTGCAGATTGGCTAGCAAAGAGCTGGAGAAATTTCTTAACAGTGGGACCAACAATAC CATCAATGTATCTAGACAAGCAACTGGAAGACGACGGTGAGTATGGGTTCAGCATGTTCAAGCCCATCAACGAGGTCTGCATGAACTGGCTAAGTGACAA GCCAAACAGGTCAGTTGTGTACGTCTCATTTGGAAGCATGGCCAGTTTAGGATCACAACAAATGGAGGAACTCTGTCTCGGATTAAGCAACAGCAACCAT TACTTCCTGTGGGTAGTGAAAGAATCCGAAGTGGCCAACCTCCCCCAAAATTTCTCCGCTGATATTGAGAAAGGATTAATTGTGTCGTGGTGCCCGCAGC TGCAAGTTCTCGCAAGTGGCAAGGTGGGGTGTTTCGTAACACACTGCGGGTGGAATTCGACACTGGAGGCATTGAGCTTGGGAGTTCCGATGGTGGCAAT GCCGCAATGGACAGACCAACCCACCAATGCTAAGTTCATAAAGGATGTGTGGAGGATGGGAGTGAGAGCTGAAGTAGTTGATGTTGCTGAGAATGGGGGA GACGTGGTGGTGAGGAAAGAAGAGATAGAAAAGTGCATAAGGGAAGTAATGGAGGAAGGAGAAGAAATGACAAGGAATGCAGACAAGTGGAAGAAGCTGA TAAAAGAGGCGGTGAGTGAAGGTGGAAGTAGTGGCAGGAATATTAGCCAGTTTGCTGCTAGCTTGTTTCAATTTACAGAGTGA
AA sequence Show only first row Show all	>Lus10024486 pacid=23170251 polypeptide=Lus10024486 locus=Lus10024486.g ID=Lus10024486.BGIv1.0 annot-version=v1.0 MAAEPLTPSRHCVVVPFPAQGHINPILQFCKRLTPKGIHVTIDLTRFIASTITPTATAGLSKVRLDTISDGYDKAGIMAAESVQVYMDTFQESDAGDPVH CIVYDFCLPRCIHVAERFGVMGAAFLTQSCAVDSIYNHVRNGLLKTPVVPDVGDGSLKLIVPGLPPLEPRDFPSFVTKSEQKYDGVLDLFIEQFSNLDNA DWVLCNTVYELEQEGADWLAKSWRNFLTVGPTIPSMYLDKQLEDDGEYGFSMFKPINEVCMNWLSDKPNRSVVYVSFGSMASLGSQQMEELCLGLSNSNH YFLWVVKESEVANLPQNFSADIEKGLIVSWCPQLQVLASGKVGCFVTHCGWNSTLEALSLGVPMVAMPQWTDQPTNAKFIKDVWRMGVRAEVVDVAENGG DVVVRKEEIEKCIREVMEEGEEMTRNADKWKKLIKEAVSEGGSSGRNISQFAASLFQFTE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G05680		UGT74E2	Uridine diphosphate glycosyltr...		Lus10024486 [exp]	0	1
AT3G62150		ABCB21, PGP21	ATP-binding cassette B21, P-gl...		Lus10038049 [exp]	5.7	0.9562
AT4G36810		GGPS1	geranylgeranyl pyrophosphate s...		Lus10023259 [exp]	8.3	0.9639
AT3G05950			RmlC-like cupins superfamily p...		Lus10032017 [exp]	9.3	0.9563
AT3G43790		ZIFL2	zinc induced facilitator-like ...		Lus10037425 [exp]	12.0	0.9444
AT3G52710			unknown protein		Lus10021354 [exp]	13.4	0.9306
AT2G47485			unknown protein		Lus10033571 [exp]	14.7	0.9532
AT2G37430	C2H2ZnF	ZAT11	C2H2 and C2HC zinc fingers sup...		Lus10024428 [exp]	19.0	0.9557
AT5G25930			Protein kinase family protein ...		Lus10034978 [exp]	19.0	0.9368
AT2G38740			Haloacid dehalogenase-like hyd...		Lus10030929 [exp]	19.1	0.9511
AT4G02460		PMS1	POSTMEIOTIC SEGREGATION 1, DNA...		Lus10010284 [exp]	23.9	0.8990

Compare expression of checked genes

Lus10024486 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.