Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G24570 74 / 1e-13 DIC2 dicarboxylate carrier 2 (.1) AT5G09470 71 / 2e-12 DIC3 dicarboxylate carrier 3 (.1) AT2G22500 70 / 3e-12 UCP5, ATPUMP5, DIC1 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10015570 [exp] 89 / 1e-20 AT4G24570 100 / 5e-27 dicarboxylate carrier 2 (.1) Lus10043336 [exp] 74 / 2e-15 AT2G22500 74 / 4e-17 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Lus10035936 [exp] 74 / 6e-14 AT4G24570 209 / 5e-67 dicarboxylate carrier 2 (.1) Lus10025725 [exp] 71 / 1e-12 AT2G22500 310 / 2e-106 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Lus10015897 [exp] 0 / 1 AT4G24570 184 / 2e-56 dicarboxylate carrier 2 (.1) Lus10009271 [exp] 0 / 1 AT4G24570 138 / 7e-41 dicarboxylate carrier 2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G071800 [exp] 2099 / 0 ND / Potri.005G157300 [exp] 97 / 2e-21 AT2G22500 412 / 2e-145 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.002G104400 [exp] 90 / 9e-19 AT2G22500 427 / 1e-151 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.017G047800 [exp] 76 / 3e-14 AT4G24570 435 / 2e-154 dicarboxylate carrier 2 (.1) Potri.017G045150 [exp] 76 / 5e-14 AT2G22500 457 / 3e-163 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.017G045100 [exp] 76 / 5e-14 AT2G22500 451 / 6e-161 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.017G045400 [exp] 76 / 5e-14 AT4G24570 355 / 4e-123 dicarboxylate carrier 2 (.1) Potri.017G045332 [exp] 75 / 9e-14 AT2G22500 410 / 1e-144 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.007G113000 [exp] 72 / 5e-13 AT4G24570 404 / 4e-142 dicarboxylate carrier 2 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10024540 pacid=23169606 polypeptide=Lus10024540 locus=Lus10024540.g ID=Lus10024540.BGIv1.0 annot-version=v1.0 ATGGAGGTGGAATTGGAGCCAAGAGTGGAAGCACTGAGCTACAAGGTGAAGGCGACTTCCAGAGAGTCTCCGTCGCAGAAAGCTTCTCATGTCCTCGATA CTGACCTTCGTTCTCATTGGTCCACCGGCACCAACACTAAAGAGTGGATCTTACTGGAACTGGACGAGCCTTGCTTGCTGTCCCATATACGAATCTATAA CAAGTCAGTGCTTGAATGGGAAATAGCCGTTGGCTTGCGGTATAAGCCTGATATATTTGTAAAAGCTCGTCCCCGCTGTGAAGCACCTCGTCGAGACATG GTATATCCTATGAATTACGCCCCATGCCGCTATGTACGGATATCCTGCTTGAGAGGCAACCCCATAGCTATCTTTTTTATTCAGCTCATTGGGGTTTCAG TTTCCTGCCTAGAACCAGAGTTCCAACCTGTCATTAATCATTTACTGCCAAATATTATTGCACACAAACAAGATGTCGATGACATGCATCTTCAGGTCAC CCTCATGCTCCTCATAACGTTTAATCTTGTATTTCCATTCTCTTTTCTGATGCAGACGGATTTAAGTAGTTTCTCAGAAGGTCCAGAGCAAACTTTACAT TTCCTGGCAATGCTTGTTGGCCCCTTTTACCCCATTCTTCAGGTCTTGAATGAAAGAGATGCTGCAAGGTCTGTGGCCACTGTTTCTGAATTTGACGTCA TTAAGCAGACGCAAGCATCATCTTTATTAACAGTGTCTTCTAACTTTGAGCCTAGAAGATCCCGAAGCACATCTCCCTTTATATCTTCCAGCTCTACGAT CTTCCGTCCTGATATAGTTTTTGTATTACTGAGAAAAGCATATAAGGAACCTGAGCTGGGAACCGCTTCTAGGATTCTGCATAAACTTACCGAGCCTGCC GCAGTGCACAAAGTGACCGGATTAAAAATTGCTTCACCTGTGGATGCTACCTCAAAGTCGGAATTTTCTAATCCTTCTACTCTAGTTGATTACTCATGTT TGTTTGGAGATGCTTTTCACATACCAGATGATCGGTGGGACTCGAACATTCTTAATCTCTTGGATATCAGTGCGGTGGAGGAAGGAATTTTTCACATTCT GTTTGCTTGTGCCTCACAGCTTTCCATTTGTCATAAATTTTCAGAGAGCACTTCTGAGTTTTTGCCAGCTTTGCCGTTAATACAAGCATTACTTCCAGCA TTACGCCCCACCATAAGCAACTTCGGTGATCATCTTGATGGAAACTTTTCACAGTGGAAACAACCTTTTGTTCTGCGTGCCCTATCCGAGATTGTTGCGA TGTCCTCTTCAGCATTATATCGGCCTCTTCTTCATGCATGTGCTGGCTATTTATCGTCATTTTCACCATCACATACGAAGGCAGCCTGCGTTCTGGTTGA TCTTTGCTCCAGTGTGCTAGCCCCTTGGATGGCTAAGGTCATTACCAAGGTTGATCTCACAATGGAGCTTCTAGAGGGCCTCTTAAGCACCATTCAGGGG GCTGGGCTTTGTATTATACGTGCTCGTGCTGCCCTCAAGTATGTTGTGCTGGGTTTGTCTGGCCACATGGATGATATAATGGGGAAGTATAAGGATGTTA AGCATAAAATCCTTTTTTTGCTGGAGATGCTAGAGCCTTTCTTGGATCCTGCTATATGTAGATTGAAGAGCACGATAGCATTTGGAGATGTTTCTGTCAT GTTTCCTCAAAAGCAGGAAGAAACCTGCACAATTGCTCTTAATGTCATTCGTACTGCAGTCCAGAAGCCAGCTGTTCTTCCGTATCTAGAATCTGAATGG AGGCGAGGATCTGTTGCTCCCAGTGTACTTCTCTCAGTATTGGAACCTCACATGTGCTTACCTCCTGAAATCGACCTTTGTAAGTCTTCAGTTTCTGATG TCAATGAGCGCGAAACTGTTACTGCACCTTCTCATTCTTCCGTTCCCCACCGCGGAGGAGGTCCCCATAATATCAATGACTTGGATGAGGCTGGTGGGAA GTTAGATGCCTTTGACATAGGAGGGAAAATTGATGCATTAGAAGACGTTAATCTACTTTTTGCTCCTACAGAACTACGTAGCATATCATTAACAAATGCT TCTGGAAACTCCCATGAATCAGTCTTGGATGCCAAGCAAAGAGATTGCAATTTAGAGATGAAATGTATCATTGAAGAAAATTTCACTGGAACCTTCCCGG ATTGCTTAGTTCTAGATGATGGTTTAAATTGTGAATACTTCAACTTGCAAGCAGACTACTTTCAGTTAGTAAACAGTCTTGATTGCAAACTCAGGGCTTC TGAATTTCGACATCTGGCCTTGGATTTACATAAGCAAGATGACATAGCTACTGAGGCTCATGATGCAGCAATTGATGCTTTGCTCTTGGCTGGAGAGTGC CATGTGAACCCTTTCTTAATGATGTCTTTCAGATCTAATCCAAAAGTGGCTTCTGGCATGGCTAAAGTTTCTGAAACTCCAAAGAGCGGGAATCCTTCTA AATACATAGGGGTTGAATTGGAAAAAATAGCAGTTCTTGAAAAGAGTAGGGACAAGACTGTTCTTGAAATAGTCCTTGAGGCCGCTGAAGTGGATTTGAA GTTTGAGAGGGAGAAAACAGGTGGGGAAGAATCTCCTTATTTACTGGAAGGAATCAATGAACAAGTCACAGAAGTTTCTTCCTTCGATATACAATCAGCT GATGCCATTACATTGGTTCGTCAAAATCAAACTTTATTGTGTAGTTTCCTTCTTCGGAGGTTGAAGAAAGAGCAACAATCTACAAATGAAGTTTTAATGC ATTCTCTTGTGTTTCTACTACACTCTGCTACCAAACTATACTGTGACCCTGGAGAAGTTATTGAAATAATACTAAGACGAGCTGAGTATCTTAGTGGAAT GCTCACTTCATTTTATCATCTGCTGAAAGAAGATAACTTGCAGCTAGATGCAGAACTGATGCACCGATTACAACGGCACTGGATACTGCTTAAAAGATTA GTTATTGCTTCAAGTGGTGAGGAAGGGTCGGACTTCTCTCTCGGTCTCAATGGCAAGTTTCAGGGTGGATATTTGATTCCTCCTTCAGCTTGGATTCAGA AAATACCAGCATTTTCTTGCAATGCATGCCCTCTTGTCCGGTTTCTTGGTTGGATGGCAGTGTCTCGCAATGCCAAACGACACAAAAAGCAGCTCATTTT CCTTGCTTCAGATCTGCCCCAACTAACAGATTTACTATCTATATTCGCTGATGAACTTGCAGTAATAGATTATGTTTTGAACCATGGAGATAATGATGCA AATGTTCAACTTCTTCTCGTTTCTGTTCATAACAAGGATTTGGCACTAGATGGCAATCAGCATAAAGATAGTACTTTTCATGTAATCTACCCTGATTTTA GCAAGTTCTTCCCAAGTATGGGAAAACATTTTAAAGGTTTTGGGGAGGACATTTTGGAGGCAGTTGGATTGCAGTTGAAATCACATTCTTCAAGTAGTCT ACCTGACATTTTGTGCTGGTTTTCAGATCTGTGCTCATGGCCATTTTTCTTACAGAAACCTTATTGTCAGCAAAATCACTTATATTTGAAAGGATATGTA ACAAAGAATGCGAAAGCAATCATCTTATACATACTTGAAGCAATTATGAAGGAGCATATGGAAGCAATGGTGCCAGAGGTACCAAAAATTGTTCAAGTGC TGGTGTCTCTTTGCAGGTCTTCATATTACGACGTGCTATTTCTTGAATCTGTAATGAGATTGCTGAAGCCAATCATATCGTATTCATTGCACAAGACATC TGAACAGGAGACGACTTACATGGATGAATCTTGTGTTAATTTTGAGCTGCTGTGCTTTGAGGATCTTTTAGTTGATCTACAACAGAGAAATGAATCTGAG GATATGTCTCCTGGAAACAAGTGGTCCAGAGCATCGACTATTTTTGTTTTGGCTTCCGTCTTTGTTGATTTATCTGCTGAATGTAAGAGAGACATTTTGC AGTCATTGACTTTGTGGGTGGGCTTTGCTAGTTTCGAGCTTAGTACTTCTTTCCATGACTACTTGTGTGCATTCCAGGCTGTTCTTGAGAGCTGCAAAAA ATTATTAGTTCAGACCTTGCGGTTCCTTGGTATGCTTCCTGTTCAGTTGCATCATTGTCCTGATGTCACTGCAGGATCAATTTCTAGCAAGCATCCAGAG AGGCATACTCTGTTTCTCAATGATGTTCAAAGTCCAATGAAATTTTCTGAGATGGAAAGCCATTTATGTCCAGAGGAGGTTGAAGGCTTTTGTAGCGACT TGGAGAACCTACTCCTAAAGCTCAATCCAAACATCGAACCATTATGGAATCTCCATCACTGTCTAGCTGAACAGATGACTGTTGTATCATCTGAATGTTT TGTGTACTTAAATTGCTTGACATCGATTGTGCCGGCAATCAAAGGTACCAATGATAGTGGTTGTGGGATTTATTTGCCAGTTAACTCGGCATATGACGGC CTGCAACATTGGGAGATCAGTTTAGAGAAATTTGGTGAAAGTATGACGGAGCTTCTACAAAATCACTGCTGGGAAGTTGCATCTCTGATGCTCGATTGTG TACTTGGAATACCATACTGTTTCCAACTGGATAATCTTGTCAGTACCATATGTTCTGCAATAGTCAAGTTTTCACGCAGGGCACCAAAACTTGCTTGGCG GTTGCAATCTAACAAATGGTTATCAGTGCTATTTGCAAGAAATGTGTCCTCTCGTTGTGAAAAATATGAGCACCTTGCTGATCTTTTTATTTCATTGTTG GGTAATCCAGAACCTGAGCAACGGTTTGTGGGTCTTCGACACCTGGGTAGATTGCTAGGCCTGGATCTATCAGGAGAAGTGGTTTTTGAGTATCCAATTT CTGATGGATTAGGATCAGTTGTGGTTTCCGAGTCATTTCTGTCATTTCTAGTCTCGAGGACATGGGATCGAGTAGTTTTGTTGGCATCCACTGATAAATT GCTACCATTGCAAACTTGTTCTATGGCACTTTTTTTGGGATATATACCACGTGCAGACAAAGAGCAGTTACAGTCTTTTCTCGCTGGAGCTGATAGCTTT CTACATGCCATAGGGAACTCTGTGTTCCCTACCTGTGAAGGCCAGTTACTGCGGCTGTCATTAGCGGTTCTTGCAAGTGCTTGCCTATACTCTCCGGCTG AAGATATTTCTTTGATACCACAAAAAGTGTGGACAAATGTTCAAACTGTTAGATCTTCTAAAACTGGTGACCTGGAGAAAAATGTTTGTAGAGCATTATG TAGATTGAGAGAGTATGGCGATGAAGCAAAAGAGATGTTGAGAGAGATGCTCTCTGCAAATTCTCCAAAGGAAGTTGCTACGGATTTTGGGAGCGTTCGG GAATCAATCCTCCAGGATTCGCTTAAGGCGGAATCGCTTCAATCATCGCCGGTTGCTCCTACACCTATTCACAACCTGCGCCCCTCTTTCGCTTTCGATC CTGACATTGGCTCCGCTGTCTCCGCTATCCACCTCCCTCCTTCTCCACCTCCTTCAGTCGGTCCCGTCGCCGTCGGAATGAACATCCTCAAGTCCGACAG GATTGCCACTTTGTTCTCCGATGTCTCCGCCACCGTCCTCCGCCAGACTCTCTACTCCACCACCAGGATGGGTCTCTACGACGTCCTCAAGACCAAGTGC ACCAATCCTCAGACTGGGAACATGCCTCTCGTCAGCATTAAGACGGTGAAGGCCGAAGGGCCGATGGATTATACGGGGGCTGGTTTCCCTGAGTAG
AA sequence Show only first row Show all	>Lus10024540 pacid=23169606 polypeptide=Lus10024540 locus=Lus10024540.g ID=Lus10024540.BGIv1.0 annot-version=v1.0 MEVELEPRVEALSYKVKATSRESPSQKASHVLDTDLRSHWSTGTNTKEWILLELDEPCLLSHIRIYNKSVLEWEIAVGLRYKPDIFVKARPRCEAPRRDM VYPMNYAPCRYVRISCLRGNPIAIFFIQLIGVSVSCLEPEFQPVINHLLPNIIAHKQDVDDMHLQVTLMLLITFNLVFPFSFLMQTDLSSFSEGPEQTLH FLAMLVGPFYPILQVLNERDAARSVATVSEFDVIKQTQASSLLTVSSNFEPRRSRSTSPFISSSSTIFRPDIVFVLLRKAYKEPELGTASRILHKLTEPA AVHKVTGLKIASPVDATSKSEFSNPSTLVDYSCLFGDAFHIPDDRWDSNILNLLDISAVEEGIFHILFACASQLSICHKFSESTSEFLPALPLIQALLPA LRPTISNFGDHLDGNFSQWKQPFVLRALSEIVAMSSSALYRPLLHACAGYLSSFSPSHTKAACVLVDLCSSVLAPWMAKVITKVDLTMELLEGLLSTIQG AGLCIIRARAALKYVVLGLSGHMDDIMGKYKDVKHKILFLLEMLEPFLDPAICRLKSTIAFGDVSVMFPQKQEETCTIALNVIRTAVQKPAVLPYLESEW RRGSVAPSVLLSVLEPHMCLPPEIDLCKSSVSDVNERETVTAPSHSSVPHRGGGPHNINDLDEAGGKLDAFDIGGKIDALEDVNLLFAPTELRSISLTNA SGNSHESVLDAKQRDCNLEMKCIIEENFTGTFPDCLVLDDGLNCEYFNLQADYFQLVNSLDCKLRASEFRHLALDLHKQDDIATEAHDAAIDALLLAGEC HVNPFLMMSFRSNPKVASGMAKVSETPKSGNPSKYIGVELEKIAVLEKSRDKTVLEIVLEAAEVDLKFEREKTGGEESPYLLEGINEQVTEVSSFDIQSA DAITLVRQNQTLLCSFLLRRLKKEQQSTNEVLMHSLVFLLHSATKLYCDPGEVIEIILRRAEYLSGMLTSFYHLLKEDNLQLDAELMHRLQRHWILLKRL VIASSGEEGSDFSLGLNGKFQGGYLIPPSAWIQKIPAFSCNACPLVRFLGWMAVSRNAKRHKKQLIFLASDLPQLTDLLSIFADELAVIDYVLNHGDNDA NVQLLLVSVHNKDLALDGNQHKDSTFHVIYPDFSKFFPSMGKHFKGFGEDILEAVGLQLKSHSSSSLPDILCWFSDLCSWPFFLQKPYCQQNHLYLKGYV TKNAKAIILYILEAIMKEHMEAMVPEVPKIVQVLVSLCRSSYYDVLFLESVMRLLKPIISYSLHKTSEQETTYMDESCVNFELLCFEDLLVDLQQRNESE DMSPGNKWSRASTIFVLASVFVDLSAECKRDILQSLTLWVGFASFELSTSFHDYLCAFQAVLESCKKLLVQTLRFLGMLPVQLHHCPDVTAGSISSKHPE RHTLFLNDVQSPMKFSEMESHLCPEEVEGFCSDLENLLLKLNPNIEPLWNLHHCLAEQMTVVSSECFVYLNCLTSIVPAIKGTNDSGCGIYLPVNSAYDG LQHWEISLEKFGESMTELLQNHCWEVASLMLDCVLGIPYCFQLDNLVSTICSAIVKFSRRAPKLAWRLQSNKWLSVLFARNVSSRCEKYEHLADLFISLL GNPEPEQRFVGLRHLGRLLGLDLSGEVVFEYPISDGLGSVVVSESFLSFLVSRTWDRVVLLASTDKLLPLQTCSMALFLGYIPRADKEQLQSFLAGADSF LHAIGNSVFPTCEGQLLRLSLAVLASACLYSPAEDISLIPQKVWTNVQTVRSSKTGDLEKNVCRALCRLREYGDEAKEMLREMLSANSPKEVATDFGSVR ESILQDSLKAESLQSSPVAPTPIHNLRPSFAFDPDIGSAVSAIHLPPSPPPSVGPVAVGMNILKSDRIATLFSDVSATVLRQTLYSTTRMGLYDVLKTKC TNPQTGNMPLVSIKTVKAEGPMDYTGAGFPE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G09470		DIC3	dicarboxylate carrier 3 (.1)		Lus10024540 [exp]	0	1
AT1G24706		EMB2793, AtTHO2	EMBRYO DEFECTIVE 2793, THO2 (....		Lus10035106 [exp]	1.0	0.9898
AT3G12810		CHR13, SRCAP, P...	PHOTOPERIOD-INDEPENDENT EARLY ...		Lus10002974 [exp]	1.7	0.9790
AT1G16800			P-loop containing nucleoside t...		Lus10035717 [exp]	2.0	0.9783
AT1G24706		EMB2793, AtTHO2	EMBRYO DEFECTIVE 2793, THO2 (....		Lus10031945 [exp]	2.0	0.9807
AT1G16800			P-loop containing nucleoside t...		Lus10037304 [exp]	2.4	0.9755
AT5G02310		PRT6, CER3	proteolysis 6 (.1)		Lus10025352 [exp]	3.2	0.9781
AT2G17930			Phosphatidylinositol 3- and 4-...		Lus10041910 [exp]	4.0	0.9743
AT1G55325		MAB2, GCT	MACCHI-BOU 2, GRAND CENTRAL, R...		Lus10035973 [exp]	5.3	0.9749
AT5G16270		SYN4, ATRAD21.3	ARABIDOPSIS HOMOLOG OF RAD21 3...		Lus10020233 [exp]	6.3	0.9591
AT3G12810		CHR13, SRCAP, P...	PHOTOPERIOD-INDEPENDENT EARLY ...		Lus10007174 [exp]	6.6	0.9670

Compare expression of checked genes

Lus10024540 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.