Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G62600 409 / 4e-141 Flavin-binding monooxygenase family protein (.1) AT1G63340 399 / 1e-137 Flavin-containing monooxygenase family protein (.1) AT1G62620 395 / 9e-136 Flavin-binding monooxygenase family protein (.1) AT1G63370 394 / 4e-135 Flavin-binding monooxygenase family protein (.1) AT1G12140 390 / 3e-133 FMOGS-OX5 ,FMO GS-OX5 flavin-monooxygenase glucosinolate S-oxygenase 5 (.1.2) AT1G12200 384 / 4e-131 FMO flavin monooxygenase, Flavin-binding monooxygenase family protein (.1) AT1G62560 382 / 4e-130 FMOGS-OX3 ,FMO GS-OX3 flavin-monooxygenase glucosinolate S-oxygenase 3 (.1) AT1G62540 380 / 2e-129 FMOGS-OX2 ,FMO GS-OX2 flavin-monooxygenase glucosinolate S-oxygenase 2 (.1) AT1G62570 375 / 2e-127 FMOGS-OX4 ,FMO GS-OX4 flavin-monooxygenase glucosinolate S-oxygenase 4 (.1) AT1G65860 368 / 8e-125 FMOGS-OX1 ,FMO GS-OX1 flavin-monooxygenase glucosinolate S-oxygenase 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10024598 [exp] 643 / 0 AT1G62620 587 / 0.0 Flavin-binding monooxygenase family protein (.1) Lus10032247 [exp] 433 / 7e-153 AT1G12140 315 / 1e-105 flavin-monooxygenase glucosinolate S-oxygenase 5 (.1.2) Lus10003474 [exp] 272 / 9e-87 AT5G07800 623 / 0.0 Flavin-binding monooxygenase family protein (.1) Lus10015731 [exp] 266 / 2e-84 AT5G07800 621 / 0.0 Flavin-binding monooxygenase family protein (.1) Lus10032235 [exp] 113 / 9e-31 AT1G62600 117 / 2e-32 Flavin-binding monooxygenase family protein (.1) Lus10005178 [exp] 65 / 4e-11 AT1G19250 744 / 0.0 flavin-dependent monooxygenase 1 (.1) Lus10038126 [exp] 64 / 1e-10 AT1G19250 735 / 0.0 flavin-dependent monooxygenase 1 (.1) Lus10020001 [exp] 63 / 1e-10 AT1G19250 709 / 0.0 flavin-dependent monooxygenase 1 (.1) Lus10023695 [exp] 62 / 3e-10 AT1G04610 692 / 0.0 YUCCA 3 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G121100 [exp] 445 / 7e-155 AT1G62600 607 / 0.0 Flavin-binding monooxygenase family protein (.1) Potri.001G121000 [exp] 407 / 3e-140 AT1G12200 557 / 0.0 flavin monooxygenase, Flavin-binding monooxygenase family protein (.1) Potri.013G019900 [exp] 406 / 1e-139 AT1G62600 513 / 0.0 Flavin-binding monooxygenase family protein (.1) Potri.012G067500 [exp] 305 / 6e-100 AT5G07800 696 / 0.0 Flavin-binding monooxygenase family protein (.1) Potri.009G143500 [exp] 61 / 8e-10 AT1G19250 400 / 2e-134 flavin-dependent monooxygenase 1 (.1) Potri.018G115800 [exp] 60 / 2e-09 AT1G19250 374 / 4e-124 flavin-dependent monooxygenase 1 (.1) Potri.010G062400 [exp] 58 / 5e-09 AT1G04610 657 / 0.0 YUCCA 3 (.1) Potri.002G254200 [exp] 58 / 5e-09 AT4G28720 694 / 0.0 YUCCA 8, Flavin-binding monooxygenase family protein (.1) Potri.006G137600 [exp] 57 / 1e-08 AT1G19250 699 / 0.0 flavin-dependent monooxygenase 1 (.1) Potri.006G060200 [exp] 56 / 2e-08 AT1G19250 378 / 5e-126 flavin-dependent monooxygenase 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0063 [flax] [poplar] NADP_Rossmann PF00743 [flax] [poplar] FMO-like Flavin-binding monooxygenase-like
Representative CDS sequence Show only first row Show all	>Lus10024609 pacid=23161576 polypeptide=Lus10024609 locus=Lus10024609.g ID=Lus10024609.BGIv1.0 annot-version=v1.0 ATGGTAAAGTCAACGCCGGTGGATTCTCTGTCAATGACCTCCCGCCGAGTCGCCGTCATCGGAGCCGGCGCGGCGGGGCTCGTCGCAGCCCACGAGCTCT GCCGCGAAGGACACAAAGTCGTCGTCTTCGAGAAAAGCAATCAAGTAGGAGGAATCTGGGTCTACACTCCCGAATCGGAGGCCGACCCGATGAGCCTCGA CCCGGCCCGGAAAATCGTCCACACCAGCCTCTACACTTCTCTCCGGACCAACCTCCCGCGAGAAGTGATGGGGTTCCGGGAGTACCCGTTCACGACCCGA CCCGACCGCGATGGCAGGCGATACCCGGGTCATCGGGAAGTGATGCTGTACTTGCAGGACTACGCTAGGGAGTTTGGGATCGAGGAGATGGTGAGGTTTG AAAGAGAAGTGGTCAACGTTAGGTTCACGGCGACGAATAATTGGGAAGTTAGGTCAAGGAATTGTAATAATAGTGACGAAGGATTCGATGACGAGAGTTA TGATGCCGTCGTTGTTTGTACCGGCCATTTCACGGAGGTTCGCCCAGCTGAGATTCCCGGGATACAGTCATGGCGAGGGAAGCAAATGCATAGCCACAAT TATCGAACACCCGAGCCGTTTCAAAATCGGGTGGTAGTTGTGATAGGGAGTCAAATGAGTGCTGCAGATATTTCGAGAGAAATCGCTGTGGTCGCCAAAG AGGTCCATCTCGCATCCAGATCTGTTGCTGACGAAACGTATGATACGATGCCTGCTTACAACAATATGTATATCCATTCTATGATAGAGAGTGCCCATGA AGACGGATCGTTGAGCTTTCGAAATGGTGAAGTCGTAGGTGCTGATATCATTCTACATTGTACCGGGTACAAGTATCACTTCCCGTTTCTTGATACTCAA GGAATCGTGACCGTGGATGACAACCGTGTTGAACCGTTATACAAACACGTCTTCCCTCCTGCTTTGGCCCCGGGGCTCTCATTTGTCGGGTTACCATGGA AGTTTGAATACAATGACTGGATTGCTACTCAATGTGGGTGCCCTGGCTTTGAAGAATGGAGAAAGGGAATGTACTTCTCCTCAAGGGAAGGGAAGCACCA CAGCCCAGAGGCCTATCGCGACGAATGGGACGAAGATCACGAGTTGATAGCAGAAGCCAACAGGGATTTCTCCAAGTACTCCTTAAAGTGA
AA sequence Show only first row Show all	>Lus10024609 pacid=23161576 polypeptide=Lus10024609 locus=Lus10024609.g ID=Lus10024609.BGIv1.0 annot-version=v1.0 MVKSTPVDSLSMTSRRVAVIGAGAAGLVAAHELCREGHKVVVFEKSNQVGGIWVYTPESEADPMSLDPARKIVHTSLYTSLRTNLPREVMGFREYPFTTR PDRDGRRYPGHREVMLYLQDYAREFGIEEMVRFEREVVNVRFTATNNWEVRSRNCNNSDEGFDDESYDAVVVCTGHFTEVRPAEIPGIQSWRGKQMHSHN YRTPEPFQNRVVVVIGSQMSAADISREIAVVAKEVHLASRSVADETYDTMPAYNNMYIHSMIESAHEDGSLSFRNGEVVGADIILHCTGYKYHFPFLDTQ GIVTVDDNRVEPLYKHVFPPALAPGLSFVGLPWKFEYNDWIATQCGCPGFEEWRKGMYFSSREGKHHSPEAYRDEWDEDHELIAEANRDFSKYSLK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G62560		FMOGS-OX3 ,FMO ...	flavin-monooxygenase glucosino...		Lus10024609 [exp]	0	1
AT1G68710			ATPase E1-E2 type family prote...		Lus10035068 [exp]	1.0	0.9655
AT4G20140		GSO1	GASSHO1, Leucine-rich repeat t...		Lus10036251 [exp]	2.0	0.9584
AT2G18150			Peroxidase superfamily protein...		Lus10028337 [exp]	3.7	0.9600
					Lus10012304 [exp]	5.1	0.9368
AT5G19970			unknown protein		Lus10019451 [exp]	5.7	0.9443
AT5G13750		ZIFL1	zinc induced facilitator-like ...		Lus10034847 [exp]	6.7	0.9585
AT5G57620	MYB	ATMYB36	myb domain protein 36 (.1)		Lus10007248 [exp]	9.8	0.9512
AT4G37320		CYP81D5	"cytochrome P450, family 81, s...		Lus10024078 [exp]	10.2	0.9563
AT1G08320	bZIP	TGA9, bZIP21	TGACG \(TGA\) motif-binding pr...		Lus10004876 [exp]	11.2	0.9368
AT2G37050			Leucine-rich repeat protein ki...		Lus10004275 [exp]	12.0	0.9555

Compare expression of checked genes

Lus10024609 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.