Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G32030 59 / 8e-12 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) AT3G22560 52 / 3e-09 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) AT2G32020 48 / 1e-07 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032323 [exp] 199 / 6e-66 AT2G32030 107 / 6e-29 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10006668 [exp] 156 / 1e-49 AT2G32030 122 / 2e-35 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10039343 [exp] 107 / 2e-30 AT3G22560 151 / 1e-46 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10010569 [exp] 103 / 1e-28 AT3G22560 144 / 7e-44 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10007013 [exp] 75 / 1e-16 AT5G64300 506 / 4e-174 RED FLUORESCENT IN DARKNESS 1, Arabidopsis thaliana riboflavin A1, ARABIDOPSIS THALIANA GTP CYCLOHYDROLASE II, GTP cyclohydrolase II (.1) Lus10010570 [exp] 60 / 4e-12 AT2G32030 220 / 7e-74 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10021914 [exp] 58 / 3e-11 AT3G22560 216 / 2e-72 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10039344 [exp] 50 / 2e-08 AT2G32030 236 / 4e-80 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G154700 [exp] 77 / 2e-18 AT3G22560 177 / 3e-57 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.008G154800 [exp] 62 / 4e-13 AT3G22560 225 / 3e-76 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.010G085600 [exp] 56 / 2e-10 AT2G32030 223 / 6e-75 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.007G102900 [exp] 44 / 4e-06 AT3G22560 96 / 9e-26 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10024705 pacid=23161543 polypeptide=Lus10024705 locus=Lus10024705.g ID=Lus10024705.BGIv1.0 annot-version=v1.0 ATGGCCGAGAAGAAGATTTCGTCAAGGGTAACCCTACGGCCCTTCAGATTATCGGACGCCGACGACATGTGGAGCTACCTGACGGCCAACCACCGGGAGA TGACACGTTACACGTCGGTACCGTGGAAGGAGGGTATGTTCAAGTCAAAGCAAGATGTGGAGTCGTACATACAGAAATTCTGCATCCCACAGCGTTACTG CCGGTCTATTTGCATCGACGACATCGACCGGTCGGTGGGGATGGTGTTAATCACCCCTGGAGTCGGAAGTACTAGTAGTGGATCATCATCATCATGGCGG AGGGGGGACATTGGAGTGCTAGTGTCGCGGGAGCATTGGTCGAAGGGAGTGTGTACGAGAGCTGTGTAA
AA sequence Show only first row Show all	>Lus10024705 pacid=23161543 polypeptide=Lus10024705 locus=Lus10024705.g ID=Lus10024705.BGIv1.0 annot-version=v1.0 MAEKKISSRVTLRPFRLSDADDMWSYLTANHREMTRYTSVPWKEGMFKSKQDVESYIQKFCIPQRYCRSICIDDIDRSVGMVLITPGVGSTSSGSSSSWR RGDIGVLVSREHWSKGVCTRAV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G32030			Acyl-CoA N-acyltransferases (N...		Lus10024705 [exp]	0	1
AT1G24420			HXXXD-type acyl-transferase fa...		Lus10025521 [exp]	3.2	0.7423
AT1G08580			unknown protein		Lus10000388 [exp]	5.8	0.7133
AT4G12520			Bifunctional inhibitor/lipid-t...		Lus10032259 [exp]	6.5	0.6633
AT5G20140			SOUL heme-binding family prote...		Lus10019445 [exp]	6.6	0.6456
AT2G17660			RPM1-interacting protein 4 (RI...		Lus10025949 [exp]	11.2	0.6928
AT1G22380		ATUGT85A3	UDP-glucosyl transferase 85A3 ...		Lus10013919 [exp]	11.7	0.6827
AT1G18010			Major facilitator superfamily ...		Lus10009413 [exp]	12.8	0.6768
AT1G22400		ATUGT85A1, UGT8...	ARABIDOPSIS THALIANA UDP-GLUCO...		Lus10013920 [exp]	16.5	0.6490
AT5G45670			GDSL-like Lipase/Acylhydrolase...		Lus10015241 [exp]	17.7	0.6490
AT2G16730		BGAL13	beta-galactosidase 13, glycosy...		Lus10014126 [exp]	18.7	0.6490

Compare expression of checked genes

Lus10024705 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.