Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G40820 3006 / 0 ATATR, ATRAD3, ATR ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) AT3G48190 249 / 1e-65 PIG1, ATATM, ATM pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) AT1G50030 179 / 3e-44 TOR target of rapamycin (.1.2) AT2G17930 100 / 3e-20 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) AT4G36080 95 / 8e-19 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (.1.2.3)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023991 [exp] 4934 / 0 AT5G40820 3276 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10019489 [exp] 241 / 4e-63 AT3G48190 3373 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10037246 [exp] 187 / 6e-47 AT1G50030 4101 / 0.0 target of rapamycin (.1.2) Lus10023840 [exp] 185 / 5e-46 AT1G50030 239 / 2e-62 target of rapamycin (.1.2) Lus10035661 [exp] 180 / 1e-44 AT1G50030 2590 / 0.0 target of rapamycin (.1.2) Lus10000064 [exp] 102 / 3e-24 AT3G48190 248 / 2e-76 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10028458 [exp] 100 / 2e-20 AT2G17930 6325 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10041911 [exp] 97 / 4e-20 AT2G17930 989 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10041910 [exp] 89 / 4e-17 AT2G17930 5862 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G179000 [exp] 3677 / 0 AT5G40820 3459 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Potri.015G076650 [exp] 241 / 4e-63 AT3G48190 3584 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Potri.009G084500 [exp] 190 / 9e-48 AT1G50030 4038 / 0.0 target of rapamycin (.1.2) Potri.001G289200 [exp] 189 / 1e-47 AT1G50030 4080 / 0.0 target of rapamycin (.1.2) Potri.004G147800 [exp] 184 / 4e-46 AT1G50030 252 / 2e-66 target of rapamycin (.1.2) Potri.007G057850 [exp] 97 / 6e-20 AT2G17930 1074 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.005G114300 [exp] 94 / 1e-18 AT2G17930 6266 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.012G075100 [exp] 65 / 9e-10 AT1G60490 1388 / 0.0 PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 (.1) Potri.007G109000 [exp] 46 / 0.0005 AT5G64070 1412 / 0.0 phosphatidylinositol 4-OH kinase beta1 (.1) Potri.005G059000 [exp] 46 / 0.0005 AT5G64070 1497 / 0.0 phosphatidylinositol 4-OH kinase beta1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF02260 [flax] [poplar] FATC FATC domain CL0020 [flax] [poplar] TPR PF02259 [flax] [poplar] FAT FAT domain CL0020 [flax] [poplar] PF08064 [flax] [poplar] UME UME (NUC010) domain CL0016 [flax] [poplar] PKinase PF00454 [flax] [poplar] PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase
Representative CDS sequence Show only first row Show all	>Lus10025091 pacid=23167826 polypeptide=Lus10025091 locus=Lus10025091.g ID=Lus10025091.BGIv1.0 annot-version=v1.0 ATGGCGACTAACATATCGAGCTTGGTCCACGAGCTCCGCGAACGAATTGCAGCATCTTCCTCTACTCAACCAGCCAACGGAGGCGACGATGGCGCTTTAG AGACCAGATTTCGAGCCGTCCTGCCTAACCTCCTTCACGCCTACGTCGTTCCGTCTTCATCCGCGAGTGAAAGAGAGGTCATCGCTGTGTTGAAGGTGAT TACTAATGTTGCGAGGAACTTCCCTGGAGTGTTTTACCAAGGGAAGGCCAGTGTTGTGCTTCCTGTCATTGGTAGAATACTCCCTTTCTTCGCTGAACCT GCATTTTGCTTGCGGCATTGTGTAATTTTTGAGACTGTTGGATCGCTACTATCCTTGCTTCGCACTGGTGAGAGAGATGCATACTGCCAGTTCTTCTTGG ATACTGTTTCAGCGGTTGAAGGGGAGATGATCAATGTGCCAAAACTTCATTTTCAGGCATGTTTTGATTTTGCTGGCATAATGGCGTCAGTGATTGATTG CGAGATTGTTCCCACGGAGGACCTAATTCTTTCAATTACGGAAATTCTAAGCAAGGACAGAGATTCAGTTCCCCTATTCAGAAACAAATCGTATGATTCG TCCATTGGAGGTTGTTTGGGTGTGTTGCATAGTAGCTGTCCTGACTATGTTGTAAAGTTAACTGCTGCTGATGTAATTAGTGTTTTCCCACGGGCAATGT GGAGAACCAAAAGCCAGGAGTTGAAGGTGGCTTTATGCAGTGCGTACATAAGGATTGCCAAAACTTGCCCGCCTCAAGTCTGGAAGCCTGAATCTTTGCT TGATATGCTCTTTATTCCAGAACCGTGTGATGCCTTAATTGAATGCTTTCAGGTAGCGCTCTCTGTACTTGGCTCAGATCAAGTTTCTGGAACGTTAATA AATACTTGCAGTGTGCGTTTAAGTACCTCAGGTGATAAATCAGTTGAGCAGCCCAGAGTTGGAGAAAAAAGACAAATCCACGATACTGATAATATATTCA GCAAAAGGCTAAAGTTAGATGAAGATATGATGGGTCCTGGTACTAGTGGACTTCCTGACTGCAAGAGGACTCATATAGTTAATATTGACTCGGAAGATGC ATATGCTGGTTCCATACATGCCTCACTTCTTTCATTAATTGAGCAACTGAAATGCCCTTCTACTCTGCTCGATTCCGGTAGACCGGAAATGGCGTTAACG GCTCTTAGTATGCTTTGTGTTGCTTTCTCGAGAGAACCAGATACTATTTTGTCGGTCTCCACCTTTGCGGTGATGCATTCATGGATTCCGTGGATCTGCA ACCAGGCGGAGCAAGCAAATCCAGCCATCCTTGATATGCTTATTTACCTAGAAGGAATACATAGCATACTACTTATTCAGAGTTCCTTTCCTGAATCAAG AGATAAGCTTGCCAAGTTTAAGAATGAAACTGCAGATGAATGGTGCAAAGTGCTGAAGCTTCCTTGGACGCAAAGTCGTGTGGTTAGTGAACCACACCCT CGATTGAAAACAAAACAAATCTCTCTTCAAGTTGCAGCGAAACTTGGCCCTAATTTAACAAGTGAAGGTTTTTTGGAAATCTTGGATCTGGGCCTTCAAG ATGAAGCTGCTGAAGTTAGGAGTGAAGCTACCATTTCTCTTTTTCTGACTTTCTTTTCATATGGCCTTGATGTACTGCCAGAAATCTTCAGAAGGCTAGA GTGCTTGGGAAGAGAAGAACATGATTCTGTTAAGAAAGCCATTCCCTTTTGTCTTGGGTATTTGTCATGCTTATGTGGATGCTGCAGTGGAGGTTCTGAT GATCAGGGGAGAAACATGTCTAAGCTTTATCTCAATAAACGCGGTGGGAAGAAGAATCAGACTCTAGAAAATCTGCTGCAAGGATTCTGGTGTCCAAAGT GCGACAAAAATGTCCTACCCGAGAAAAAGTCATTATTTATGGAAACACAGCCCCTTGGTCTACAAAACGGTGGTGCTTTTAATTGTGATTTCATGGTTCT CACATCTGTGTTCTTTAACCTTCTTTATGGTGATTCTTCAGAAGAGGTTCAAGTTGCATGTGTGAAAAATATTGGAAGAATACTTCTGCATTTGACTGCA GATGATCTCATCAAAACAAGATCTGATTGGAAAAAAGGCCTCGAGTTTTGTCTGAACAATGCAAGCAGAGCAGTAAGGGAAGCATTCTGCACTCAGATTT GCACCTTCCTGACAGATGCTGTCTTCATATGCTTATTTGAGGAGGAGAGTTCACCAAATAGATGCAGAGAAGAAAGTTTCATGGATGTTATTAAGTGTTC ACTGGTAGCTGCTGAAGATGCTGAAGTATTTGAGACTGTTCTGGAATCAATACTGCAAATCATGGTCTCTGTTGATATTAGCAGTCACATATATTTGCGT TCCTTATTACTGTTGGTTGATCAGCTTGATAATCCACACAAGATAGTAGGAACGACGATATCAAAGTTGATACATAAATCTTGCTTTTTCCATCTTAAAG CTGGGCCGGAGCTACTCATATCAAAAGTTGTTCACACCCGTAATTTACTGTTTGAGCATTTAAGTATGAATCTTGTGAGTCGTCCGAAGCTGGTTAAAGT GTTCTCAGAAATCGTGCTTGGTATTGAGACTAAAGACCTAATTGAGAAAATGATTCCCTTAGTTCTTCCAAAGCTTGTAGTTTCTTGGCGGAAAAATGAA CAAGCAGTGGGGACACTATATGAGTTAGCCAAGTGCTTGAACACTGAGATGGTTCCTCTCGTAGTTAATTGGCTGCCAAAGGTCCTTGCATATGCTCTTC ATCAAACAGATAGGCAAGAACTGCTATCTAGCTTGCAGTTCTACCATGACCAAACTGGTTCTGACAGCCAAGAAATATTTGCAGCTGCATTACCTGCCCT GCTGGATGAACTTGTATGCTTTCTTGATGGCTGCGATTTATTTGATATAAAGAAAAGGTTGTTAAGGGTGCCTGAGATGATAAAAGAAATTGCTAAAGTT CTTACAGGTTCAGAAGATCTATCATGTTTTTTGAGGAATCATTTTGTTGGTCTCCTTAACAGTATTGATAGGAAAATGCTTCATGCAAAGGATGTTTCAC TGCAGATACAGGCACTGCAACGCATTAGAATGTTGATTGAAATGATGGGGTCTCATCTTAGTACTTACGTTCCAAAACTGATGGTCCTTCTCATGCATGC TATTGATAAAGAATCCCTGCATAGTGAAGGTCTCTCTGTCTTGCACTATTTTATTGAGCAGTTGGTGAGCAAATCACCATCCAGCATCGAACATGTTGTG TCTCAGGTGTTTGCTGCTCTTGTTCCCTTCTTGGAGAGATGTAAAGAAAGTTCTTCTGCACAGTTGAAGACGGTAGTAAATATACTGGAAGAACTGGTTT TAAAAAACAAAATTGTCTTGAAGCAGCATATTCGCGAATTCCCTTTATTGCCCAGCATTCCTTTGCTAATGGATGTGAACACGGCCATCCAAGAGGCACG CGGTTCATTAACTTTGAAGGATCAGTTACGAATTATTTCTGAAGGTTTGAATCATGAGAACCTGAATGTGAGATACATGGCAGTGTGCGAGTTGAGCAAG TTACTTAATCTGAGGAAGGTAGATATAACAGCCTTAATTACTGGCGAGGTTACAGCAGACATGGATGTTCTAAGCTCTTTGATTAATTCCCTGTTGAGAG GATGTGCTGAAGAATCAAGGACTGCTGTGGGACAGCGACTAAAATTGGTCTGTGCTGATTGTCTAGGTGCTTTGGGTGCAGTTGACCCTGCTAAAGTGAT AAGCATGCCAAGCAAACGTTTTACAATTGAATGTTCAGATGATGACCTTATTTTTGAGTTGATTCACAAGCACTTAGCAAGAGCTTTTAGAGCTGCACCT GATACAGTTGTTCAGGACTCGGCTGCATTAGCAATACAAGAGCTGCTTAAGATTGCTGGTTGTGAGGCATCATTAGATGTAAATGTGGCTTCTTCTTTAC ATGCTCCCAAGGGTAGGTCTGCTGATGGTAGCAGTGCAATGAATAATAGAGGCCAGAGATTGTGGGACAGGTTTTCTAATTATGTCAAAGAGATAATAGC TCCTTGTTTGACTTCTCGGTTTCAGCTTCCTAATGTTGCTGATTCATCTACAGCTGGACCAATATATAGACCATCTTTGTCATTTAGAAGATGGATATTC TTTTGGATAAAGAAGTTGACTGCACATGCGACTGGATCCCGTGCAAGTATATTTAATTCATGCAGAGGCATAGTACGACATGATATGCAAATAGCCATAT ATCTCTTACCCTACCTTGTCCTTAATGCTGTTTGTCATGGTACCAAAGAGGCACGCCATAGCATTACTGAGGAAGTGCTATCTGTTCTAAGTGCTGCGTT ATCAGAAAATAGTGGTGCTGCTATTCATGTTGGTGGACAAACTGAAGTCTGCATTCAAGCTGTTTTCACTCTGCTTGATAACCTTGGGAAATGGGTGGAT GATGTTGAGCAAGACTTAGCATTGTCCCAGTCTACTCAGCCAACAACGTCTAGAAAGCAAGCTTCCAAGTCAAAAGATCAAAATGCAACTTTCTTGACAG ATCAGGATCAACTCCTTATCCAGTGTAAACATGTTTCAGAGCTACTGGATGCTGTTCCCAAGGTTACTCTTGCAAGGGCATCCTTTAGATGTCAGGCATA TGCTAGATCTTTGATGTACTTTGAGTCTCATGTGCGTGAAAAATCAGGTTCATTTAATCCTGCTGCCGAGAGAAGTGGCATCTTTGAGGATGGAGATGTC TCATACCTGATGGAAATATATAGTTGTCTTGATGAACCTGATGGCCTATCAGGATTGGCATCTTTGCGGAAATCTATGAGCTTACAGGACCAGCTCTTGC TAAATAAGAAGGCTGGAAATTGGGCTGAGGTTTTGACTTCATGTGAGCAAGCTTTACAGACAGAGTCCATCTCAATTCAGAGACATTCAGATGTTTTGAA CTGTTTGCTGAACATGTGCCATCTGCAGGCAATGGTTACACATGTTGATGGGTTGGTTTCTAGGTTTCCCCAATACAAGAAAACATGGTGCATGCAAGGG GTGCAGGCAGCATGGAGACTAGGCAGGTGGGACTTGATGGATGAATACCTCAATGGTGCTGATGAAGAAGGCTTGCTTTGTAGTGGAGCTGAGAGTAATG CTTCGTTTGACATAAATGTTGCTAAAATTCTCCAGGCTATGATGAAGAAGAATCAATCGGCAGTTGTTGAGAGGATCGGAATGTCCAAACAGGCTTTGAT TGCTCCTCTTGCTGCTGCAGGCATGGATTCCTACATGAGGGCTTACCCCTTGATTGTGAAACTTCACCTATTGCAGGAACTAGAAGGTTTCCATTCTCTT CTTATTAATGACTCTTTCTTAGAGAAGAGGTTCCATCCAAGTGATATGGAATTCACAAAATTAGTGCAGAACTTGGAAAATAGGATTAGCATTACACAAC CATCACTATGGACTAGAGAGCCACTCTTAGCTTTTCACAGGCTTGTATTCACATCAAGTGGCCTTGGTGCTCAAGTTGGGAACTGTTGGCTCCAATATGC AAAGCTCTGTCGTTCTGCTGGTCATTATGAAACAGCAAACAGAGCAATTCTTGAAGCTCAATCTTCAGGAGCACTAAATGTTCATGTGGAGAAGGCAAAG CTTTTGTGGAACACTAGGCGATCAGATGGTGCAATTGCAGAATTGCAACAATCTCTTCTGCACTTGCCTGTGGAGGTTGTGGGCACTGCTACTAGATCAT CTATTACCAATCTTTCATTGGTACCTCTGAACCCTCAATCTTCTGACTGCAAAACTCAAGCTTTAAACGATAATCAGGATGTTGCCAAGACTCTCCTCTT GTATACACGATGGATTCATTACACTGGACAGAAACAAAAAGAAGATGTCATAGCTCTCTATTCCAGGGTCAGGGAACTGCAACCTCTGTGGGATAAAGGG TTCTTTTATCTTGCAAAATATTTTGATGAGGTGCTCGTTGATGCTAGGAAAAGACAGGAAGACAATTCTGACTTGGGTTCCAGAGCTGTAACCTTGGCTT CTAGTGGTATCTCTACTTCAAACAATGAGAAGCCCTGGTGGTTCCACTTACCTGATGTGCTATTGTTCTATGCCAAGGGCTTGCATAAGGGGCATAAGAA TCTTTTTCAAGCTCTTCCAAGATTGCTGACCTTGTGGTTCGAATTTGGAAGCATTTATCAAAGATCTCGTCCTACTTCAAACGGGGAATTGGCAAAGGTG CATGCCAAGGTGTTGACAATTGTCAGAGGGTGTTTGAAAGATTTGCCAACATACCAGTGGTTGACTGTTCTGCCTCAATTGGTTTCAAGGATCTGCCATC AGAATGAAGATGTTGTTCATCTAGTCAAAAGGATTATCACTTCTGTTCTCAGAGAATACCCCCAACAAGCGTTATGGATTACAGCAGCTGTTTCGAAGTC CAAAGTATCTTCAAGGAGGGAAGCAGCAGCTGCAATATTACAAGAGGCGAAAAAAGGGTTTGGTCAAGGGAACTCCGGGATTAATTTGTTTGCTCAGTTT GCTACCTTGATTGATCATCTGATTAAGTTGTGCTTTCACCCAGGCCAGCCAAAATCTAGGACTATTAATATTGCAACTGAATTCAGTGCCTTGAAAAGGA TGATGCCGCTGGGAATCATCATGCCAATTCAGCAGTCTCTTTCTTTTACCTTGCCAACCTATACCATGAATGAGTCACTTACATCCGATATATTTTCAGC TTCTGAATTTCCAATGATTTCCGGAATAGCTGATGAGGCTGAGATCCTTTCGTCTCTTCAGCGACCAAAGAAAGTTATTTTAATGGGTAGTGATGGCGTT CAACGCCCATTCCTGTGCAAACCCAAGGACGACCTCAGAAAAGATGCCCGTATGATGGAGTTCACTGCAATGATAAACCGTCTTTTGTCAAAATATCCTG AAAGCCGTAGAAGGAAACTCTATATTCGTACCTTTGCAGTGATTCCTCTAACTGAAGACTGTGGTATGGTTGAATGGGTGCCTCATACCCGCGGACTCCG GCATATTCTTCAAGACATATATTCCACATGTGGAAAGTTTGATCGGCAGAAAACACATCCTCAAATTAAACGGATCTACGATCAATGCCAAGGGAAAATG CCAGAAGACGAGATGCTTAAAAGCAAACTCCTTCCTCTATTCCCTCCAGTTTTCCACAAGTGGTTCCTTACTACTTTTTCTGAGCCGGCTGCTTGGTTTA GAGCTCGAGTTGCTTATGCTCACACCACTGCAGTATGGTCAATGGTGGGGCATATTGTGGGCCTGGGAGACAGACACGGTGAAAACATTCTCTTCGACTC GACGACAGGTGATTGTGTTCATGTTGACTTCAGTTGCTTATTTGACAAAGGCTTGCAGTTGGAAAAGCCAGAGCTAGTGCCTTTCAGGCTAACCCAGAAC ATGATTGATGGGCTTGGAATTACTGGATATGAGGGCACCTTTCTGAAAGTCTGTGAAATCACTCTTACGGTGCTTAGAACACACAGGGAGACTTTGATGA GTGTTCTTGAAACTTTCATTCATGATCCTCTTGTCGAGTGGACGAAATCTCACAAATCCAGTGGGACAGAAGTTCAAAACCCTCATGCTCAGCGAGCCAT CAGCAACATAGAAGCAAGGTTGCAAGGGGTAGTTGTTGGTGTTGGGGCAGCACCTTCTTTGCCGCTAGCTGTTGAAGGTCAGGCTAGGCGTTTGATTGCT GAAGCCGTTTCACACAGAAATCTTGGGAAAATGTACATTTGGTGGATGCCATGGTTTTGA
AA sequence Show only first row Show all	>Lus10025091 pacid=23167826 polypeptide=Lus10025091 locus=Lus10025091.g ID=Lus10025091.BGIv1.0 annot-version=v1.0 MATNISSLVHELRERIAASSSTQPANGGDDGALETRFRAVLPNLLHAYVVPSSSASEREVIAVLKVITNVARNFPGVFYQGKASVVLPVIGRILPFFAEP AFCLRHCVIFETVGSLLSLLRTGERDAYCQFFLDTVSAVEGEMINVPKLHFQACFDFAGIMASVIDCEIVPTEDLILSITEILSKDRDSVPLFRNKSYDS SIGGCLGVLHSSCPDYVVKLTAADVISVFPRAMWRTKSQELKVALCSAYIRIAKTCPPQVWKPESLLDMLFIPEPCDALIECFQVALSVLGSDQVSGTLI NTCSVRLSTSGDKSVEQPRVGEKRQIHDTDNIFSKRLKLDEDMMGPGTSGLPDCKRTHIVNIDSEDAYAGSIHASLLSLIEQLKCPSTLLDSGRPEMALT ALSMLCVAFSREPDTILSVSTFAVMHSWIPWICNQAEQANPAILDMLIYLEGIHSILLIQSSFPESRDKLAKFKNETADEWCKVLKLPWTQSRVVSEPHP RLKTKQISLQVAAKLGPNLTSEGFLEILDLGLQDEAAEVRSEATISLFLTFFSYGLDVLPEIFRRLECLGREEHDSVKKAIPFCLGYLSCLCGCCSGGSD DQGRNMSKLYLNKRGGKKNQTLENLLQGFWCPKCDKNVLPEKKSLFMETQPLGLQNGGAFNCDFMVLTSVFFNLLYGDSSEEVQVACVKNIGRILLHLTA DDLIKTRSDWKKGLEFCLNNASRAVREAFCTQICTFLTDAVFICLFEEESSPNRCREESFMDVIKCSLVAAEDAEVFETVLESILQIMVSVDISSHIYLR SLLLLVDQLDNPHKIVGTTISKLIHKSCFFHLKAGPELLISKVVHTRNLLFEHLSMNLVSRPKLVKVFSEIVLGIETKDLIEKMIPLVLPKLVVSWRKNE QAVGTLYELAKCLNTEMVPLVVNWLPKVLAYALHQTDRQELLSSLQFYHDQTGSDSQEIFAAALPALLDELVCFLDGCDLFDIKKRLLRVPEMIKEIAKV LTGSEDLSCFLRNHFVGLLNSIDRKMLHAKDVSLQIQALQRIRMLIEMMGSHLSTYVPKLMVLLMHAIDKESLHSEGLSVLHYFIEQLVSKSPSSIEHVV SQVFAALVPFLERCKESSSAQLKTVVNILEELVLKNKIVLKQHIREFPLLPSIPLLMDVNTAIQEARGSLTLKDQLRIISEGLNHENLNVRYMAVCELSK LLNLRKVDITALITGEVTADMDVLSSLINSLLRGCAEESRTAVGQRLKLVCADCLGALGAVDPAKVISMPSKRFTIECSDDDLIFELIHKHLARAFRAAP DTVVQDSAALAIQELLKIAGCEASLDVNVASSLHAPKGRSADGSSAMNNRGQRLWDRFSNYVKEIIAPCLTSRFQLPNVADSSTAGPIYRPSLSFRRWIF FWIKKLTAHATGSRASIFNSCRGIVRHDMQIAIYLLPYLVLNAVCHGTKEARHSITEEVLSVLSAALSENSGAAIHVGGQTEVCIQAVFTLLDNLGKWVD DVEQDLALSQSTQPTTSRKQASKSKDQNATFLTDQDQLLIQCKHVSELLDAVPKVTLARASFRCQAYARSLMYFESHVREKSGSFNPAAERSGIFEDGDV SYLMEIYSCLDEPDGLSGLASLRKSMSLQDQLLLNKKAGNWAEVLTSCEQALQTESISIQRHSDVLNCLLNMCHLQAMVTHVDGLVSRFPQYKKTWCMQG VQAAWRLGRWDLMDEYLNGADEEGLLCSGAESNASFDINVAKILQAMMKKNQSAVVERIGMSKQALIAPLAAAGMDSYMRAYPLIVKLHLLQELEGFHSL LINDSFLEKRFHPSDMEFTKLVQNLENRISITQPSLWTREPLLAFHRLVFTSSGLGAQVGNCWLQYAKLCRSAGHYETANRAILEAQSSGALNVHVEKAK LLWNTRRSDGAIAELQQSLLHLPVEVVGTATRSSITNLSLVPLNPQSSDCKTQALNDNQDVAKTLLLYTRWIHYTGQKQKEDVIALYSRVRELQPLWDKG FFYLAKYFDEVLVDARKRQEDNSDLGSRAVTLASSGISTSNNEKPWWFHLPDVLLFYAKGLHKGHKNLFQALPRLLTLWFEFGSIYQRSRPTSNGELAKV HAKVLTIVRGCLKDLPTYQWLTVLPQLVSRICHQNEDVVHLVKRIITSVLREYPQQALWITAAVSKSKVSSRREAAAAILQEAKKGFGQGNSGINLFAQF ATLIDHLIKLCFHPGQPKSRTINIATEFSALKRMMPLGIIMPIQQSLSFTLPTYTMNESLTSDIFSASEFPMISGIADEAEILSSLQRPKKVILMGSDGV QRPFLCKPKDDLRKDARMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRHILQDIYSTCGKFDRQKTHPQIKRIYDQCQGKM PEDEMLKSKLLPLFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLQLEKPELVPFRLTQN MIDGLGITGYEGTFLKVCEITLTVLRTHRETLMSVLETFIHDPLVEWTKSHKSSGTEVQNPHAQRAISNIEARLQGVVVGVGAAPSLPLAVEGQARRLIA EAVSHRNLGKMYIWWMPWF

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G40820		ATATR, ATRAD3, ...	ARABIDOPSIS THALIANA ATAXIA TE...		Lus10025091 [exp]	0	1
AT5G51660		CPSF160, ATCPSF...	cleavage and polyadenylation s...		Lus10031111 [exp]	2.4	0.9557
AT3G11964			RNA binding;RNA binding (.1)		Lus10029327 [exp]	3.5	0.9536
AT3G57060			binding (.1.2)		Lus10039013 [exp]	6.2	0.9500
AT2G05120			Nucleoporin, Nup133/Nup155-lik...		Lus10001170 [exp]	6.6	0.9499
AT5G51660		CPSF160, ATCPSF...	cleavage and polyadenylation s...		Lus10031692 [exp]	7.1	0.9493
AT5G40820		ATATR, ATRAD3, ...	ARABIDOPSIS THALIANA ATAXIA TE...		Lus10023991 [exp]	7.9	0.9464
AT4G30150			unknown protein		Lus10012174 [exp]	9.8	0.9380
AT3G21540			transducin family protein / WD...		Lus10033802 [exp]	10.7	0.9248
AT3G06530			ARM repeat superfamily protein...		Lus10008676 [exp]	11.0	0.9474
AT3G19050		POK2	phragmoplast orienting kinesin...		Lus10027934 [exp]	12.0	0.9453

Compare expression of checked genes

Lus10025091 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.