Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G37380 67 / 2e-12 MAKR3 MEMBRANE-ASSOCIATED KINASE REGULATOR 3, unknown protein AT2G39370 59 / 1e-09 MAKR4 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10024441 [exp] 417 / 2e-144 AT2G37380 87 / 8e-19 MEMBRANE-ASSOCIATED KINASE REGULATOR 3, unknown protein Lus10003309 [exp] 47 / 2e-05 AT2G39370 175 / 2e-52 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein Lus10030311 [exp] 44 / 0.0001 AT2G39370 181 / 4e-54 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G214700 [exp] 72 / 8e-14 AT2G39370 116 / 2e-29 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein Potri.016G080800 [exp] 71 / 2e-13 AT2G39370 157 / 9e-45 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein Potri.010G212800 [exp] 51 / 8e-07 AT2G39370 176 / 2e-51 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein Potri.008G048300 [exp] 44 / 0.0001 AT2G39370 175 / 2e-51 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10025286 pacid=23157389 polypeptide=Lus10025286 locus=Lus10025286.g ID=Lus10025286.BGIv1.0 annot-version=v1.0 ATGGCGACAACAGATCAAGAATCCAACTGTTCCATTCACGCAGAATCCGAAGACGACGACGAATTCATCGACATGGAAGTCATCAGCTGCTCCTCCTCTT CTCCTTCACCATACTCCTCCTCCTCCTCCTCTTCTATCCACGGCGGCGAGTTCGAGTTCCAAATGTCTTCTTCTTCTTCACTCCTTGAAACCAAGAACAA CACCAACACTTCCCCTGCCGATGAACTCTTCTACAAAGGCAACCTCCTCCCTCTCCACCTCCCTCCCCGCCTCCAATTGGTCCAATCCCTCCTCCTCCAG TCCTCCGTCTCCGCAACCGCCGCAGTCACCCTGGTCAACATTTCTCCATCCGGATCGGGTCGGGTCAGCTCCGAGCTCAACCCGGACGATAACTGTTTCT TCGATTGGTCCGCCGAAACATCCGGAGGACGATTCCTGTCGGAGGACGATGATAGCCAGAACAAGAAGTCGTGGTCGTCGTCGTTGCCGTATTCGTGGGG GAAGAAGCTCCGGCAATCTGTTCTCTGTCGGAAGATCAAGTCCTCCAGATCTTATCTCAAAGCGCTTCTTCTCTTCCGAAACGACAAGTCGTTTGGCAGG TCGTCAAAAATTTTGAAAACAGAGTCAGCGGAGGATCTTCCCTTCCGAAACGACGAGTCGTTTGGAAGCTCAACAAATTTGAAAACAGAGTCGTCGGCGG CGGGGAAGAGAGAATGCTTCGTTAGCAAGTTTCCGAGAGTGATGGGGAGGAAGAAGATGCATAGCAAGGGAAACAACAACAATCCATTTGGAAGGATGGA GAATTACCAGGAGTACAGCAGTATTATGAAGAAGAGGATCGAGAAGGAAATGGCGGAGGAATGCTTGGGGTTGGGGGGATTCAGCAGCAATCGGAATAGT ATTAGTAATAGTACTAACAGTAATTACATAGGCCAGCAGAGGAAATCCTTCTCTGGAGCGATTCAGTGCCATGTTTCTTCTTCCACTAAAACGACGTCGT CGTCTTCTTCTACGTCTGCGTCTTCTTCCTCGTCGTCCTTCTCCCTAAGCTCCGACAGGCTGTATTACGATCTTCTGTGGCTGAAGAAAGGCAGTAGCAG CGACAGTACTAAGGAGGTTGAGAGCTCGATCGAAGGCGCCATTGCTCACTGCAAAAAATCGAGAGACAATGCCAGGAACAAAGGTGGCAGTTTCGCCGTT GATTCCTCGTCAGCTAGAAACGCCTAA
AA sequence Show only first row Show all	>Lus10025286 pacid=23157389 polypeptide=Lus10025286 locus=Lus10025286.g ID=Lus10025286.BGIv1.0 annot-version=v1.0 MATTDQESNCSIHAESEDDDEFIDMEVISCSSSSPSPYSSSSSSSIHGGEFEFQMSSSSSLLETKNNTNTSPADELFYKGNLLPLHLPPRLQLVQSLLLQ SSVSATAAVTLVNISPSGSGRVSSELNPDDNCFFDWSAETSGGRFLSEDDDSQNKKSWSSSLPYSWGKKLRQSVLCRKIKSSRSYLKALLLFRNDKSFGR SSKILKTESAEDLPFRNDESFGSSTNLKTESSAAGKRECFVSKFPRVMGRKKMHSKGNNNNPFGRMENYQEYSSIMKKRIEKEMAEECLGLGGFSSNRNS ISNSTNSNYIGQQRKSFSGAIQCHVSSSTKTTSSSSSTSASSSSSSFSLSSDRLYYDLLWLKKGSSSDSTKEVESSIEGAIAHCKKSRDNARNKGGSFAV DSSSARNA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G37380		MAKR3	MEMBRANE-ASSOCIATED KINASE REG...		Lus10025286 [exp]	0	1
AT4G21920			unknown protein		Lus10001143 [exp]	1.4	0.9676
AT1G19530			unknown protein		Lus10002540 [exp]	2.8	0.9692
AT2G18700		ATTPSB, ATTPS11	TREHALOSE-6-PHOSPHATE SYNTHASE...		Lus10015509 [exp]	3.2	0.9646
AT4G34030		MCCB	3-methylcrotonyl-CoA carboxyla...		Lus10014068 [exp]	3.5	0.9673
AT1G18270			ketose-bisphosphate aldolase c...		Lus10008754 [exp]	4.0	0.9672
AT4G37870		PCK1, PEPCK	phosphoenolpyruvate carboxykin...		Lus10042934 [exp]	6.0	0.9584
AT1G57610			Protein of unknown function (D...		Lus10034435 [exp]	6.3	0.9571
AT5G49450	bZIP	ATBZIP1	basic leucine-zipper 1 (.1)		Lus10037750 [exp]	7.3	0.9557
AT2G22500		UCP5, ATPUMP5, ...	DICARBOXYLATE CARRIER 1, PLANT...		Lus10043336 [exp]	8.5	0.9415
AT4G15630			Uncharacterised protein family...		Lus10033971 [exp]	9.4	0.9311

Compare expression of checked genes

Lus10025286 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.