Plant FIBer expression Database

Lus10025457 [FLAX]


External link
JGI Phytozome v13
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT2G39200 399 / 1e-133 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1)
AT1G61560 390 / 7e-130 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
AT1G11310 379 / 9e-126 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2)
AT3G45290 338 / 1e-110 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1)
AT2G33670 313 / 2e-101 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1)
AT5G65970 310 / 5e-99 ATMLO10, MLO10 MILDEW RESISTANCE LOCUS O 10, Seven transmembrane MLO family protein (.1)
AT2G17480 306 / 3e-97 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
AT2G17430 304 / 4e-97 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1)
AT1G42560 290 / 7e-93 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1)
AT2G44110 284 / 4e-90 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10015328
[exp]
846 / 0 AT1G11310 432 / 2e-146 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2)
Lus10040388
[exp]
377 / 1e-124 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1)
Lus10041410
[exp]
370 / 4e-122 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
Lus10023506
[exp]
372 / 5e-122 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1)
Lus10036519
[exp]
370 / 7e-122 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
Lus10036121
[exp]
347 / 1e-113 AT3G45290 542 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1)
Lus10019630
[exp]
331 / 9e-107 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
Lus10022096
[exp]
317 / 5e-101 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
Lus10036120
[exp]
310 / 5e-99 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
Poplar homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.011G058900
[exp]
540 / 0 AT1G61560 445 / 2e-151 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
Potri.004G050000
[exp]
527 / 0 AT2G39200 490 / 4e-170 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1)
Potri.011G059200
[exp]
524 / 0 AT2G39200 424 / 2e-143 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1)
Potri.009G011900
[exp]
402 / 2e-134 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
Potri.008G041400
[exp]
391 / 2e-130 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
Potri.010G220500
[exp]
375 / 2e-124 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
Potri.016G088000
[exp]
372 / 3e-124 AT1G61560 576 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
Potri.007G064200
[exp]
370 / 2e-122 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1)
Potri.006G129700
[exp]
342 / 5e-112 AT3G45290 505 / 1e-175 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1)
Potri.007G064300
[exp]
332 / 1e-107 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
PF03094 Mlo Mlo family
Representative CDS sequence
>Lus10025457 pacid=23150863 polypeptide=Lus10025457 locus=Lus10025457.g ID=Lus10025457.BGIv1.0 annot-version=v1.0
ATGGGTTTTGAAGATGATGGTGAAATTCCAGTGGAGGCAACACCAACATGGGCCGTAGCAACTGTTTGCTTCTTCCTCTTACTCATCTCCATAGCCTTTG
AGCATTTGATCCATCTCATCTCCAAGAACTTCACAAAGAGAAGGAGCAAAGCACTTCTGAGGGCATTGGACAAGATCAAGTCTGAAATGATGCTGTTGGG
TTTCATATCGCTGTTGCTTGCTGTATCCCAAAAGATGATAGCCAACATCTGTATTCCACGAAGCATTGGAGAAACTTTCCTTCCTTGCGGGTTTCGTCCC
GATCATGCTTTGAGCCATGTCGAGGAGGAAGCCAAATGTGCGGCGCAGGGGAAGGTTTCGTTGTTGTCGAGGCATGGTGTTATGCAACTTAATTACATGA
TGTTCGTGCTGGCTACGTTTCATGCCATGTCATGCACTCTCATATTCGGCTTAGGGATGGCCAAGATGCGACGGTGGGCTTCGTGGGAGGCTGAGACACA
GACTCTTGAATACCGGTCTTCCAACGATCCACGAATGAATCGGCTGGCTCATCAAACTTCATTCGGGAGGAGGCACCTTCGCTTTTGGAGTGAACACCCA
GTTCTTCGTTGGACGACATGTTTTACTAGGCAATTTGTTGTGTCCGTGACAAAGGGGGACTATCTCACACTACGATATGGATTCATCATGGCCCACTTTG
AGCAAGAAATCGACTATAATTTTCAGAAGTTCATAAAACGAGCTATGGAACGTGACTTCCGTGTTGTGGTCGGGACAAGTATATGGATCTCTACTTTCTC
TGTACTTTCCATGTTCTTCCAAGCACACAGATTCCACAGTTTCATGTGGCTTCCATTTGTTCCATTGGTGATGTTACTTGTGATTGGTGCTAAACTACAA
GACATTATAACTTCAATGTGCTTGGAGAGTAGCAATGGGAAATCCTTGCAGGTTGTCCATGGAACTCTGCTTGTTAGACCAAGTGATGGCTTCTTCTGGT
TTGGCTCTCCCAAATTCATCCTCCACCTCATTCACTTCATCATCTTTCAGAACTCCTTTCAATTGGCATTCTTCACTTGGACATCGAATTTCGGACTGAA
ATCGTGCTTCCATAGAGAAACAGAAAATATAACGATCAGGGTGTTCGTTGGGATACTTGTACACTTCCTCGTCGGCTACGTTACTCTCCCTCTCTACGCT
CTGGTCACCCAGATGGGGAGCTCAATGCGGAAGAGCGTCTTCCCGTCGGCGGTGGTTGTTGGACTCCGGAGGTGGCGGCGGAGGGCGAGGAAGAATATCA
AGAATAAGAGGAAGTATAATTTGACGGTGGCGATGATGGAGGCAGGAAATCTGGATGGTGAGAATTCGATTCGAAACTCAATTATTTCTCTTGGTACATC
GACGTCATTTGATTCGTTGGGCTCTGACGATGAGAGGGAATCAGAATCAGAATTGGAGTCGGAATCAGAAGCGAAAGTTGTGGTAGTTGAAGTGAGAAGT
GAAGAGGAGGTGCAGCGGAGGGAAGATTGA
AA sequence
>Lus10025457 pacid=23150863 polypeptide=Lus10025457 locus=Lus10025457.g ID=Lus10025457.BGIv1.0 annot-version=v1.0
MGFEDDGEIPVEATPTWAVATVCFFLLLISIAFEHLIHLISKNFTKRRSKALLRALDKIKSEMMLLGFISLLLAVSQKMIANICIPRSIGETFLPCGFRP
DHALSHVEEEAKCAAQGKVSLLSRHGVMQLNYMMFVLATFHAMSCTLIFGLGMAKMRRWASWEAETQTLEYRSSNDPRMNRLAHQTSFGRRHLRFWSEHP
VLRWTTCFTRQFVVSVTKGDYLTLRYGFIMAHFEQEIDYNFQKFIKRAMERDFRVVVGTSIWISTFSVLSMFFQAHRFHSFMWLPFVPLVMLLVIGAKLQ
DIITSMCLESSNGKSLQVVHGTLLVRPSDGFFWFGSPKFILHLIHFIIFQNSFQLAFFTWTSNFGLKSCFHRETENITIRVFVGILVHFLVGYVTLPLYA
LVTQMGSSMRKSVFPSAVVVGLRRWRRRARKNIKNKRKYNLTVAMMEAGNLDGENSIRNSIISLGTSTSFDSLGSDDERESESELESESEAKVVVVEVRS
EEEVQRRED

DESeq2's median of ratios [FLAX]

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Coexpressed genes

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Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol HYPR_s2_CTRR_s2_FoxR_s4_CTRR_s4_FoxR_r1_CTRR_r1_FoxR_r3_CTRR_r3_FoxR_r1s2_CTRR_r1s2_FoxR_r3s2_CTRR_r3s2_FoxR_s6_CTRR_s6_Al4R_s6_Al12R_s6_Al24R_s8_CTRR_s8_Al4R_s8_Al12R_s8_Al24R_r5_CTRR_r5_Al4R_r5_Al12R_r5_Al24R_r7_CTRR_r7_Al4R_r7_Al12R_r7_Al24LEAF_NLEAF_PLEAF_NPKSAMAR_BetAR_rdfcPARTOP_BetTOP_rdfiFIBaiFIBbMID_BetMID_rdftFIBatFIB_GrtFIB_LitFIB_BitFIBbtFIBb_PUL8tFIBb_PUL24tFIBb_PUL96tFIBb_OPP8tFIBb_OPP24tFIBb_OPP96sXYLasXYLbsXYLb_PUL8sXYLb_PUL24sXYLb_PUL96sXYLb_OPP8sXYLb_OPP24sXYLb_OPP96
AT1G11310 PMR2, ATMLO2, M... POWDERY MILDEW RESISTANT 2, MI... Lus10025457
[exp]
0 1

Lus10025457 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.