Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G22610 1178 / 0 Di-glucose binding protein with Kinesin motor domain (.1.2) AT1G72250 676 / 0 Di-glucose binding protein with Kinesin motor domain (.1.2) AT5G27550 478 / 4e-155 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G27000 336 / 2e-99 KATD, ATK4 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) AT1G73860 335 / 1e-98 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT2G47500 332 / 6e-98 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT5G41310 320 / 7e-94 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT3G44730 320 / 5e-93 AtKIN14h, ATKP1 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) AT1G18410 318 / 4e-92 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G63640 305 / 9e-88 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035954 [exp] 1906 / 0 AT2G22610 1302 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10005582 [exp] 672 / 0 AT1G72250 1109 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10013714 [exp] 672 / 0 AT1G72250 1098 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10004487 [exp] 449 / 4e-143 AT5G27550 881 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10029914 [exp] 439 / 1e-139 AT5G27550 905 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10029865 [exp] 328 / 2e-96 AT5G27000 1014 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Lus10032897 [exp] 322 / 4e-93 AT3G44730 1302 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) Lus10009851 [exp] 318 / 7e-93 AT2G47500 1245 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Lus10015212 [exp] 315 / 2e-92 AT5G27000 924 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G110600 [exp] 1038 / 0 AT2G22610 1057 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.011G140000 [exp] 693 / 0 AT1G72250 1201 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.001G436200 [exp] 687 / 0 AT1G72250 1248 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.005G030271 [exp] 488 / 8e-159 AT5G27550 865 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.013G020700 [exp] 483 / 2e-156 AT5G27550 862 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.013G011500 [exp] 332 / 2e-97 AT5G27000 1081 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Potri.014G125700 [exp] 327 / 5e-96 AT2G47500 1218 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.002G201000 [exp] 327 / 9e-96 AT2G47500 1237 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.005G021100 [exp] 326 / 2e-95 AT2G47500 1051 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.001G467600 [exp] 321 / 5e-93 AT3G44730 1266 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00225 [flax] [poplar] Kinesin Kinesin motor domain CL0202 [flax] [poplar] GBD PF11721 [flax] [poplar] Malectin Malectin domain
Representative CDS sequence Show only first row Show all	>Lus10025708 pacid=23177449 polypeptide=Lus10025708 locus=Lus10025708.g ID=Lus10025708.BGIv1.0 annot-version=v1.0 ATGGAAGATCTTCAATTTAGCAACCTGGTATCGGAAGCGGTGCTCTCTCGGTCTTCCTCTTCTTGCTTTCCTCCGATTGGAAACGACGTTGATGCGGGTT ACGGTCCCACAGAATCCGCTATTGACGACTCTGATGCTGGGAAATCTTTGGTCGATTCTATGCTTTGCGACTCCAATTCAAGGCTCGTCCTTTCTGGGTT TTCAAGATCGAATTGCTCAGAAACAGATGGAGTTTTCATGATCGTAAATAGTGGAAATGAGGACTCAGTTGAAACAGACTCCACTCTCAAATTTGTGGGC GACTCTTATTACGAGGGAGGGACTGTTTTGCGGACAGACGAGGATATAGCTGATGCTGGGGATTTCCCATTCATCTACAAGTCTGCGAGGTTCGGGAACT TCTGTTACAGATTTCATGGCCTTCCTTCAGGAGATTATTTCGTCGATCTCCACTTTGCTGAGATTATAAACACTAATGGACCTAAAGGAATACGAGTGTT TGATGTATTCATACAGGAAGACAAGGTCCTATCAGAATTTGATATTTTCTCTATCGTTGGAGCGAATAAACCATTGCAATTGGTCGATGTGAGGGTTTCA GTGAAGGAAGATGGAATACTTTTATTGAGATTTGAAGGGCTTAGTGGGAGTGCGATGTTGAGTGCAATCTGCATCAGGAAAGCATCTGAAGTGACAGCTC CTCAGCAGCAAAAAGAGTACCTTAGATGCAATCATTGTGCTTCGGAGATGGAAGTTTCTTCAGCTCAGAAAAGGCTTGTGCGAACTAAAGTAACGGATAA GTATGAGAAAAGGATTCAAGACCTCACTGCTGTCTGCCAGCGTAAGACAAATGAATGCCATGAGGCTTGGATGTCACTTACTGCTGCAAATGAGCAGCTG GAGAAAGTCCGCATGGAGCTTGATAACAAGACCTACCAGACCCGGTCTTTAGATCAAACTGTGGGCGAACAAGCTGAAAATTTAAGGAATATCACCACCA TGTATGGTCGAGATAAGAAGTCCTGGTCACAAGCGATCAACAACATGCAAGAGAAAATTAGGATTATGAAAGAGGAGCACATTAGGCTTTCTCGTGATGC ACATGGTTGTATCGATTCCATACCCGAGCTGAATAACATGGTGTCTGGAGTTCAGGCATTAGTGAAGAACAAGCAAAGAGGAAGCAGTTATATAATCAAA TACAAGAGACTAAAGGAAATGATCTCAGGAAACATCCGAGTTTTTTGCCGTTGTCGGCCATTAAGTAAGGAAGAAGCATCAACTGGGTATGCAACAGTTG TTGACTTTGATGCAGCGAAGGATGGGGATCTTGGAGTTCTCACAGGCGGCTCCAACAAAAAGATTTTCAAATTTGACAGGGTCTATACCCCTAGAGATGG TCAAGTTGACGTGTTTTCGGATGCCTCACCAATGGTGGTGTCGGTGCTGGATGGTTACAATGTATGCATATTTGCGTATGGACAAACAGGAACAGGAAAG ACATTTACAATGGAGGGGCCTGAGCATAATAGGGGTGTCAATTATAGGACTCTTGAGCAATTGTTCACAGTCGCCCGAGAAAGGAGTGATACTTTCACGT ATAACATATCTGTCAGTGTCCTTGAAGTCTACAATGAACAAATTAGGGATCTGTTGACTACATCAACAACATCAAAGAAGTTGGAGATAAAACAAACATC TGAAGGATCGCATCACGTTCCAGGGGTTGTAGAAGCAAAGGTTGATAACATTAAAGATGTTTGGAGCGTACTGCAGGCTGGAAGCAATGCCAGGGCTGTT GGTTCAAACAATGTCAACGAACACAGCAGCCGGTCTCATTGTATGCTGTGCATCATGGTAAAAACAAAAAATCTGATGAACGGTGAGTGCACGAAAAGCA AACTTTGGCTTGTAGACTTGGCGGGAAGTGAACGATTAGCAAAAACTGATGCACAAGGTGAAAGACTGAAGGAAGCACAAAACATCAACAAATCGCTCTC TGCTCTTGGAGATGTTATATATGCTTTGGCAACTAAGAGCAGTCACATTCCATACAGGAATTCTAAGTTGACACATTTACTTCAGGACTCTTTAGGAGGC GACTCAAAAACCTTGATGTTCGTGCAAATTAGCCCTTCTGAGCATGACTTGAGCGAGACTCTGAGCTCACTGAATTTCGCAACTCGAGTTCGAGGGGTTG AGCTGGGTCCTCCAAAGAAGCAACTTGATACAAGTGAGATCCAGAGATTGAAAGCACTGCTTGAAAAAACAAGGCAAGAATCTAGATCAAAAGATGAATC ACTACGAAAACTTGAAGAGAATTTACAGAACCTGGAGAATAAGACCAGGGGCAAAGACCATGTGTACAAAAGCCAGTTAGAGAAGATACGAGAACTTGAG GGCCAGCTTGAACAGAAAGCTAATTTGCATGGCCAGTCAGAGAAGTATGTTTCCCAACTTTCAGAAAGACTGAAAGGGAGAGAAGAAATATGTAACGAAT TGCAGCAAAAGGTCAAGGAATTGGAGAACAAGCTGAAACAAAGAGAGCAATCAGACTCTGAAACTTTTCAGCATAAGGTTAGGGAAATGGAGAAGAAAAT GAATGAGCAAGCTCAAGAGGCGGAGTCTCAATCCTATACTCTGCAACAAAAGATTAAGGAGCTAGAAGAAAAGCTGAGGGAGCAGGAACAGAAGTTACAG AATAGGCGAGTTAGCAACGCAGTGGATGGCATTAGGGCTAGTCCGACAGGAAAAAAAGCTTGTGCTACAGATGATGAACGGATCACAGATGCTGAGGCTA ACATCTTAAAGTGTTCAAACTCAATAAACCGTCCCTCGGATGTCAAAGGATACACGATGGCAAAGGCTGCTGGTGATGAGGCCCGAAAGAAAAGGCATTC CAGAAATGGAGAAACTGAGAATTGTAATATGCATGCATGCTTCAATGATTACAGAGGTAGGAAATCAGACCCTCCAAAGATCGCTAGAGTTACCAGACCA CCACCAACAACAACAACAACAGCAAAGGCGGCAGGAACAGGTCAAGCGACCTTGACCCACAAGAGAATCAGCAGAGAAACAGCAAGACTTGCAATCAAGG ACAGGGATCCAAAGAAAAGGACTTGGTGCTAG
AA sequence Show only first row Show all	>Lus10025708 pacid=23177449 polypeptide=Lus10025708 locus=Lus10025708.g ID=Lus10025708.BGIv1.0 annot-version=v1.0 MEDLQFSNLVSEAVLSRSSSSCFPPIGNDVDAGYGPTESAIDDSDAGKSLVDSMLCDSNSRLVLSGFSRSNCSETDGVFMIVNSGNEDSVETDSTLKFVG DSYYEGGTVLRTDEDIADAGDFPFIYKSARFGNFCYRFHGLPSGDYFVDLHFAEIINTNGPKGIRVFDVFIQEDKVLSEFDIFSIVGANKPLQLVDVRVS VKEDGILLLRFEGLSGSAMLSAICIRKASEVTAPQQQKEYLRCNHCASEMEVSSAQKRLVRTKVTDKYEKRIQDLTAVCQRKTNECHEAWMSLTAANEQL EKVRMELDNKTYQTRSLDQTVGEQAENLRNITTMYGRDKKSWSQAINNMQEKIRIMKEEHIRLSRDAHGCIDSIPELNNMVSGVQALVKNKQRGSSYIIK YKRLKEMISGNIRVFCRCRPLSKEEASTGYATVVDFDAAKDGDLGVLTGGSNKKIFKFDRVYTPRDGQVDVFSDASPMVVSVLDGYNVCIFAYGQTGTGK TFTMEGPEHNRGVNYRTLEQLFTVARERSDTFTYNISVSVLEVYNEQIRDLLTTSTTSKKLEIKQTSEGSHHVPGVVEAKVDNIKDVWSVLQAGSNARAV GSNNVNEHSSRSHCMLCIMVKTKNLMNGECTKSKLWLVDLAGSERLAKTDAQGERLKEAQNINKSLSALGDVIYALATKSSHIPYRNSKLTHLLQDSLGG DSKTLMFVQISPSEHDLSETLSSLNFATRVRGVELGPPKKQLDTSEIQRLKALLEKTRQESRSKDESLRKLEENLQNLENKTRGKDHVYKSQLEKIRELE GQLEQKANLHGQSEKYVSQLSERLKGREEICNELQQKVKELENKLKQREQSDSETFQHKVREMEKKMNEQAQEAESQSYTLQQKIKELEEKLREQEQKLQ NRRVSNAVDGIRASPTGKKACATDDERITDAEANILKCSNSINRPSDVKGYTMAKAAGDEARKKRHSRNGETENCNMHACFNDYRGRKSDPPKIARVTRP PPTTTTTAKAAGTGQATLTHKRISRETARLAIKDRDPKKRTWC

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G22610			Di-glucose binding protein wit...		Lus10025708 [exp]	0	1
AT5G48310			unknown protein		Lus10025189 [exp]	1.4	0.9837
AT5G48310			unknown protein		Lus10016071 [exp]	2.0	0.9822
AT1G18370		HIK, ATNACK1	HINKEL, ARABIDOPSIS NPK1-ACTIV...		Lus10032452 [exp]	2.4	0.9809
AT3G19050		POK2	phragmoplast orienting kinesin...		Lus10012048 [exp]	4.2	0.9752
AT1G59540		ZCF125	P-loop containing nucleoside t...		Lus10007725 [exp]	4.5	0.9734
AT3G10310			P-loop nucleoside triphosphate...		Lus10042045 [exp]	4.9	0.9768
AT1G18370		HIK, ATNACK1	HINKEL, ARABIDOPSIS NPK1-ACTIV...		Lus10042952 [exp]	5.0	0.9755
AT2G36200			P-loop containing nucleoside t...		Lus10021340 [exp]	5.3	0.9748
AT3G15550			unknown protein		Lus10025758 [exp]	6.9	0.9731
AT3G19050		POK2	phragmoplast orienting kinesin...		Lus10018341 [exp]	7.5	0.9706

Compare expression of checked genes

Lus10025708 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.