Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G51150 665 / 0 ATP binding microtubule motor family protein (.1.2) AT5G66310 663 / 0 ATP binding microtubule motor family protein (.1) AT2G21300 602 / 0 ATP binding microtubule motor family protein (.1.2) AT4G38950 599 / 0 ATP binding microtubule motor family protein (.1.2) AT4G24170 582 / 0 ATP binding microtubule motor family protein (.1) AT1G18370 461 / 3e-145 HIK, ATNACK1 HINKEL, ARABIDOPSIS NPK1-ACTIVATING KINESIN 1, ATP binding microtubule motor family protein (.1) AT3G43210 442 / 2e-138 TES, ATNACK2 TETRASPORE, ARABIDOPSIS NPK1-ACTIVATING KINESIN 2, ATP binding microtubule motor family protein (.1) AT5G42490 394 / 3e-119 ATP binding microtubule motor family protein (.1) AT3G10180 291 / 8e-82 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G59540 280 / 5e-80 ZCF125 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014268 [exp] 1959 / 0 AT5G66310 667 / 0.0 ATP binding microtubule motor family protein (.1) Lus10031086 [exp] 601 / 0 AT2G21300 1026 / 0.0 ATP binding microtubule motor family protein (.1.2) Lus10035471 [exp] 597 / 0 AT2G21300 1011 / 0.0 ATP binding microtubule motor family protein (.1.2) Lus10033920 [exp] 563 / 0 AT3G51150 578 / 0.0 ATP binding microtubule motor family protein (.1.2) Lus10010624 [exp] 558 / 0 AT3G51150 577 / 0.0 ATP binding microtubule motor family protein (.1.2) Lus10015448 [exp] 552 / 0 AT3G51150 558 / 0.0 ATP binding microtubule motor family protein (.1.2) Lus10032452 [exp] 460 / 4e-145 AT1G18370 1452 / 0.0 HINKEL, ARABIDOPSIS NPK1-ACTIVATING KINESIN 1, ATP binding microtubule motor family protein (.1) Lus10005181 [exp] 456 / 6e-144 AT3G43210 1189 / 0.0 TETRASPORE, ARABIDOPSIS NPK1-ACTIVATING KINESIN 2, ATP binding microtubule motor family protein (.1) Lus10042952 [exp] 458 / 3e-140 AT1G18370 1206 / 0.0 HINKEL, ARABIDOPSIS NPK1-ACTIVATING KINESIN 1, ATP binding microtubule motor family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G014800 [exp] 744 / 0 AT5G66310 868 / 0.0 ATP binding microtubule motor family protein (.1) Potri.005G116900 [exp] 727 / 0 AT3G51150 668 / 0.0 ATP binding microtubule motor family protein (.1.2) Potri.002G027600 [exp] 608 / 0 AT2G21300 722 / 0.0 ATP binding microtubule motor family protein (.1.2) Potri.004G162800 [exp] 603 / 0 AT2G21300 1031 / 0.0 ATP binding microtubule motor family protein (.1.2) Potri.009G124500 [exp] 596 / 0 AT2G21300 752 / 0.0 ATP binding microtubule motor family protein (.1.2) Potri.006G136600 [exp] 470 / 6e-149 AT3G43210 1250 / 0.0 TETRASPORE, ARABIDOPSIS NPK1-ACTIVATING KINESIN 2, ATP binding microtubule motor family protein (.1) Potri.012G054400 [exp] 458 / 3e-144 AT1G18370 1466 / 0.0 HINKEL, ARABIDOPSIS NPK1-ACTIVATING KINESIN 1, ATP binding microtubule motor family protein (.1) Potri.015G044600 [exp] 442 / 3e-138 AT1G18370 1518 / 0.0 HINKEL, ARABIDOPSIS NPK1-ACTIVATING KINESIN 1, ATP binding microtubule motor family protein (.1) Potri.006G040700 [exp] 303 / 2e-85 AT3G10180 1336 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.014G013300 [exp] 284 / 2e-81 AT1G59540 885 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00225 [flax] [poplar] Kinesin Kinesin motor domain CL0023 [flax] [poplar] PF11995 [flax] [poplar] DUF3490 Domain of unknown function (DUF3490)
Representative CDS sequence Show only first row Show all	>Lus10025969 pacid=23173262 polypeptide=Lus10025969 locus=Lus10025969.g ID=Lus10025969.BGIv1.0 annot-version=v1.0 ATGGGGGCAGCTGAAGATGAAGAGTCAATATACGAACCAAAAGATGGGGAGGAGAAAATATTGGTATCGGTTCGAGTGAGGCCCCTGAATGAGAAGGAAG GTACAAGACATGATGTGTCGGACTGGGAATGCATCAATGACACCACTGTCATTTACAGAAACAATCTCTCTGTCTCTGATCGTTCAATGTACCCATCTGC ATATACCTTTGACAAAGTCTTTGGTCCTGATTGTCCGACAAATCAGGTCTATAAGGACGGGGCTAAGGCAGTTGCTCTCTCCGTTGTCAGCGGTATAAAT TCAAGTGTATTTGCTTATGGACAAACGAGTAGTGGAAAGACATACACAATGCGGGGGATCACCCACTATACTGTAGCTGATATATATGAGTATGTGGAGA GACACAAGGAACGAGAGTTTGGCTTGAAGTTCTCTGCAATGGAGATTTACAATGAATCTGTTAGAGACCTTCTTAGTGTGGATCCAACGCCTCTTCGACT TCTAGACGATCCAGAGAGAGGGACGGTCGTTGAACGGTTGACTGAGGAAACTCTTAGAGATTGGAATCATTTTCAAGAACTCATGTCCATTTGTGAAGCT CAGAGACAAATAGGGGAGACTTCCCTTAATGAGACAAGCTCTAGATCTCATCAAATATTAAGGCTGACAATTGACAGTTCTGCAGTTGAGTTTCTAGGCA AAGACAAGTCGAGCACTCTCTCGGCCACTGTGAATTTTATCGATTTAGCTGGAAGTGAGCGTGCGTCTCAGGCAATGTCTGCCGGCATGAGGTTAAAAGA AGGTTGCCATATAAATCGCAGTTTACTGACGTTGGGAACTGTTATCCGTAAACTAAGTAAAGGAAGGAATGGGCATATCCCTTTCAGAGATTCAAAGTTG ACTCGCATATTGCAGTCGTCCTTGGGAGGAAATGCTAGGACTGCTATTATTTGCACAATGAGCCCTGCACGAACCCATGTTGAGCAGTCCAGAAACACAC TTCTATTTGCTAGTTGTGCAAAAGAAGTTTCTACTAATGCGCAGGTCAACGTTGTCATGACTGATAAAGCATTGGTTAAGCAACTACAAAGAGAACTGGC AAGGTTGGAGAACGAATTAAAAAGTACAGGATCAAAACCTGTTTCGTCCAATGTCATTGAATTATTGAGGAAAAAGGACCAGGAGATTGAGAAGCTTACG AAAGAAGTAGCTGATCTGAACAGACAACTAAACATAGGTGAATCTCGTGTTGAAGATCAGCAACCAGAGAGAGTCAGAGTCTCATTTCCATGGGAGGTAG AGGCGGGTCAGCAATACCCAAAGTTGCGAGTTCAGAATTCCTGGAAATCCGAGACCTCGATATCATATTCACCAATTTCCGAGGATCCTCGTATGACAGT AAGATCTTTCGAACCATCCCAGACTTCGGAGGACCAATGCAGTATAATATCCGATGAGACCTTTAACCAACTCGCCGAATTTCAAGAGTTCCTTCAGTCA TATGCCTCGCCAGACGTATCATACACAACCAATAAAAAAAGTACTAAAGGTGAAGCGCATGAGATGGAAAATGAGAAGAAGCAGAGTCATGAGAGTCTAA TACCCATTCCCTGCAAAGAAGTGCAATGCGTCGAGGTCGACAACTCGGCCAGCACCAGCAGCAGCGTTTCATCCAATGTGATAGAGTCAGCATCCAGCCC TAATACCAGACATTCCGACTCTGTAGTTTCATCTCCCCCTCATCCAGAGGTTGATGATGAAGCTCACAAAGCAAAAGAAATAGTCATGTCTCCACTTAAG GAGGAAGAACAACCACCTTTGGTGGAGAAGGAATTAGTTTTGTCGCCACTGATGGAGGAGAAAGAAGCTGAGGTGGACAAAGAAGCTGTTTCTTCTCCGT TGAAGGAGGAGAAAGAAGCTGAGGTGGACAAAGAAGCAGTTTCTTCTCCATTGAAGGAGGAGATAGAAGAAGACAAGGAGAAGAGAGAAGTAGTTTCCTC TTCACCAACGGATGAGACAGAAGTCGAGCAGAAGGAAAAACTAGTTCATTCTCCAATGAGTGATGAGCAAGAAACTGACGATAAGAAATCACTAGCTTCC TCGCCAATGAAGGATGAGAAGGAGATGGAGGATAAGGAAGAAGAACTAGCTTCATCTCCTCTGAAGGAGGAGAAAGAAGCTGAGACGACGGAAGAAGAAG CTAAGGAAAACAAACAACCAGGTTCATTTTCAATCCAACAGAACGAGGTGAATGATTCGCCATCTGATTTTAACAGGTTAGGCAGTGAAACACCATCTCC AAGGGACTTTATTATACCTTCCCCGGAGAAATCTCCATGGCTGATGGAGGAAGACATGTATACCCCTCGAAGCTTGAGGTTGATCAGGAGCAAAAGCGCT AGAGCAGCTTTAACAACCAAATCAACTCATTGGTTTGAGAGGACAGAGAAGCATGACAGTACACCTCCGTGCATATTCGACAAATGTTTCACTCAGAGGC GAGCAAGTGTTGCTGGTCCGATTTTCCCCTTGAGGTATGATCTTCAAAATGATGGGTTATCAGGGAGAAGCTCTCAGGATTCTGAAACTACTCCTGGTGC TGATGATCTTGATCACAATGGCGAAACTCCTAGTGATTGGAGGAGCAGTAGAGCTAGAAACATGGCTGTTGCAACTACGGACACGCCTGAATCAAGTCTG GCTGTAGTACCTGAAAAGAGAGATGTGGGTTTGGATCCCATTCAAGACGATGGAGGAACTTCTCCATCATGGCCTGCGGAATTCCAGAGGCTGCAAGGAG AGATCATTCTGCTTTGGCATTCTTGCAACATTTCCTTAGTACATAGAACCTATTTTTTCCTTTTGTTCAAAGGTGATCCTGCGGATTCTTTCTACATGGA GGTGGAGCTCAGAAGACTGTCCTTCTTAAAGGACACCTATTCCAAAGGCAACCAGCAGCCTATGGCACATTCAGAAGTCATGACAGCATCTTCCAGCAAA AGAGCATTGGATGAAGAGAAGCATATGCTGTGCAAGCAAATGCAAAGGAACCTTTCCAAGGAAGAAAGGGAGAACCTTTTCTTGAGATGGGGCATCAAGT TGAACTCCCAAAACAGAAGACTGCAACTGGTGAGCCGTCTCTGGACCAAGACAAGGGACATGGATCACATTTCGGAGAGCGCGAATGTGGTAGCGAAGCT GGTTGGTTTCGACGAAGGGAAAGAGCTTGCCATGAAGGGGATGTTTGGACTCCTCAACTTCACACCGAAACTGAACAGGAGAAGAACTTCCTTATGGAAA CGAAGTGTGCTCTCCATCTTATAA
AA sequence Show only first row Show all	>Lus10025969 pacid=23173262 polypeptide=Lus10025969 locus=Lus10025969.g ID=Lus10025969.BGIv1.0 annot-version=v1.0 MGAAEDEESIYEPKDGEEKILVSVRVRPLNEKEGTRHDVSDWECINDTTVIYRNNLSVSDRSMYPSAYTFDKVFGPDCPTNQVYKDGAKAVALSVVSGIN SSVFAYGQTSSGKTYTMRGITHYTVADIYEYVERHKEREFGLKFSAMEIYNESVRDLLSVDPTPLRLLDDPERGTVVERLTEETLRDWNHFQELMSICEA QRQIGETSLNETSSRSHQILRLTIDSSAVEFLGKDKSSTLSATVNFIDLAGSERASQAMSAGMRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKL TRILQSSLGGNARTAIICTMSPARTHVEQSRNTLLFASCAKEVSTNAQVNVVMTDKALVKQLQRELARLENELKSTGSKPVSSNVIELLRKKDQEIEKLT KEVADLNRQLNIGESRVEDQQPERVRVSFPWEVEAGQQYPKLRVQNSWKSETSISYSPISEDPRMTVRSFEPSQTSEDQCSIISDETFNQLAEFQEFLQS YASPDVSYTTNKKSTKGEAHEMENEKKQSHESLIPIPCKEVQCVEVDNSASTSSSVSSNVIESASSPNTRHSDSVVSSPPHPEVDDEAHKAKEIVMSPLK EEEQPPLVEKELVLSPLMEEKEAEVDKEAVSSPLKEEKEAEVDKEAVSSPLKEEIEEDKEKREVVSSSPTDETEVEQKEKLVHSPMSDEQETDDKKSLAS SPMKDEKEMEDKEEELASSPLKEEKEAETTEEEAKENKQPGSFSIQQNEVNDSPSDFNRLGSETPSPRDFIIPSPEKSPWLMEEDMYTPRSLRLIRSKSA RAALTTKSTHWFERTEKHDSTPPCIFDKCFTQRRASVAGPIFPLRYDLQNDGLSGRSSQDSETTPGADDLDHNGETPSDWRSSRARNMAVATTDTPESSL AVVPEKRDVGLDPIQDDGGTSPSWPAEFQRLQGEIILLWHSCNISLVHRTYFFLLFKGDPADSFYMEVELRRLSFLKDTYSKGNQQPMAHSEVMTASSSK RALDEEKHMLCKQMQRNLSKEERENLFLRWGIKLNSQNRRLQLVSRLWTKTRDMDHISESANVVAKLVGFDEGKELAMKGMFGLLNFTPKLNRRRTSLWK RSVLSIL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G51150			ATP binding microtubule motor ...		Lus10025969 [exp]	0	1
AT3G63340			Protein phosphatase 2C family ...		Lus10014699 [exp]	1.0	0.9281
AT1G17820			Putative integral membrane pro...		Lus10040647 [exp]	2.4	0.9080
					Lus10008674 [exp]	2.8	0.9061
AT2G40130			Double Clp-N motif-containing ...		Lus10028282 [exp]	3.5	0.9076
AT2G28550	AP2_ERF	TOE1, RAP2.7	TARGET OF EARLY ACTIVATION TAG...		Lus10001979 [exp]	4.0	0.8896
AT1G17420		ATLOX3, LOX3	Arabidopsis thaliana lipoxygen...		Lus10015666 [exp]	5.2	0.8878
AT2G40130			Double Clp-N motif-containing ...		Lus10040206 [exp]	5.5	0.9016
AT3G24715			Protein kinase superfamily pro...		Lus10025941 [exp]	5.9	0.8971
AT4G29230	NAC	ANAC075, NST9	NAC domain containing protein ...		Lus10012927 [exp]	8.4	0.8659
AT3G57680			Peptidase S41 family protein (...		Lus10011300 [exp]	8.6	0.8142

Compare expression of checked genes

Lus10025969 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.