Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G45020 123 / 2e-35 Glutathione S-transferase family protein (.1.2) AT4G19880 119 / 1e-33 Glutathione S-transferase family protein (.1.2.3) AT5G44990 110 / 8e-31 Glutathione S-transferase family protein (.1.2.3) AT5G44000 79 / 2e-18 Glutathione S-transferase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10027233 [exp] 82 / 2e-19 AT5G44000 508 / 2e-180 Glutathione S-transferase family protein (.1) Lus10005510 [exp] 60 / 7e-12 AT4G19880 162 / 3e-48 Glutathione S-transferase family protein (.1.2.3) Lus10014304 [exp] 0 / 1 AT4G19880 499 / 3e-179 Glutathione S-transferase family protein (.1.2.3) Lus10038348 [exp] 0 / 1 AT4G19880 580 / 0.0 Glutathione S-transferase family protein (.1.2.3) Lus10036209 [exp] 0 / 1 AT4G19880 580 / 0.0 Glutathione S-transferase family protein (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G121600 [exp] 124 / 2e-35 AT4G19880 600 / 0.0 Glutathione S-transferase family protein (.1.2.3) Potri.014G192300 [exp] 81 / 6e-19 AT5G44000 493 / 2e-174 Glutathione S-transferase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0497 [flax] [poplar] GST_C PF00043 [flax] [poplar] GST_C Glutathione S-transferase, C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10026012 pacid=23173273 polypeptide=Lus10026012 locus=Lus10026012.g ID=Lus10026012.BGIv1.0 annot-version=v1.0 ATGGAGCCAGAAGCAGTAGGGACTTGTACGATCTCGCGAGCACAAATTACACCGGGAAGTATACAGTTCCAGTGCTGTGGGATAAAAAGCTCAGGATTCA ACGACTTAGTAACATTGGACCTCTACCCTCCTCGATTACGAGACCGAATCGACGAAACTAATGGCAGGATAGATAGTGGGATAAACAGTGGTGTATACAA ATGTGGGTTTGCCAGGAAGCAAAGTCCATACGAGGAGGCAATAAAAGAGTTGTATGAATCCTTCGACAATTGTGAGGCGATACTCAATAAGCAACGATAT ATTTGTGGAGACGTATTGACTGAAGCAGACATCCGTCTGTTTGTTACATGA
AA sequence Show only first row Show all	>Lus10026012 pacid=23173273 polypeptide=Lus10026012 locus=Lus10026012.g ID=Lus10026012.BGIv1.0 annot-version=v1.0 MEPEAVGTCTISRAQITPGSIQFQCCGIKSSGFNDLVTLDLYPPRLRDRIDETNGRIDSGINSGVYKCGFARKQSPYEEAIKELYESFDNCEAILNKQRY ICGDVLTEADIRLFVT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G45020			Glutathione S-transferase fami...		Lus10026012 [exp]	0	1
AT3G61510		AT-ACS1, ACS1	ARABIDOPSIS THALIANA 1-AMINOCY...		Lus10007910 [exp]	1.0	0.9807
AT2G37770		ChlAKR, AKR4C9	Chloroplastic aldo-keto reduct...		Lus10024354 [exp]	4.0	0.9490
AT5G44390			FAD-binding Berberine family p...		Lus10038442 [exp]	4.0	0.9668
AT2G44450		BGLU15	beta glucosidase 15 (.1)		Lus10031235 [exp]	5.9	0.9590
AT5G12340			unknown protein		Lus10036031 [exp]	6.0	0.9591
					Lus10010270 [exp]	6.9	0.9576
AT4G11410			NAD(P)-binding Rossmann-fold s...		Lus10035479 [exp]	8.1	0.9609
AT2G23770			protein kinase family protein ...		Lus10018788 [exp]	8.2	0.9625
AT1G03940			HXXXD-type acyl-transferase fa...		Lus10039745 [exp]	10.2	0.9542
AT3G12500		PR-3, PR3, CHI-...	PATHOGENESIS-RELATED 3, basic ...		Lus10041831 [exp]	10.2	0.9361

Compare expression of checked genes

Lus10026012 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.