Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G25737 415 / 3e-141 Sulfite exporter TauE/SafE family protein (.1) AT2G36630 268 / 3e-84 Sulfite exporter TauE/SafE family protein (.1) AT1G11540 111 / 9e-27 Sulfite exporter TauE/SafE family protein (.1) AT1G61740 102 / 2e-23 Sulfite exporter TauE/SafE family protein (.1) AT4G21250 91 / 3e-19 Sulfite exporter TauE/SafE family protein (.1) AT4G21260 69 / 2e-12 Sulfite exporter TauE/SafE family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014316 [exp] 672 / 0 AT2G25737 536 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10011682 [exp] 423 / 3e-144 AT2G25737 632 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10011683 [exp] 277 / 8e-88 AT2G25737 444 / 9e-154 Sulfite exporter TauE/SafE family protein (.1) Lus10029813 [exp] 270 / 9e-85 AT2G36630 612 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10020733 [exp] 269 / 2e-84 AT2G36630 611 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10022134 [exp] 105 / 1e-25 AT2G25737 168 / 8e-50 Sulfite exporter TauE/SafE family protein (.1) Lus10022133 [exp] 79 / 9e-18 AT2G25737 106 / 2e-28 Sulfite exporter TauE/SafE family protein (.1) Lus10020068 [exp] 80 / 8e-16 AT1G61740 371 / 2e-125 Sulfite exporter TauE/SafE family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G124200 [exp] 511 / 5e-179 AT2G25737 453 / 1e-156 Sulfite exporter TauE/SafE family protein (.1) Potri.007G026800 [exp] 511 / 6e-179 AT2G25737 434 / 2e-149 Sulfite exporter TauE/SafE family protein (.1) Potri.006G242100 [exp] 426 / 1e-145 AT2G25737 568 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.003G053000 [exp] 415 / 5e-141 AT2G25737 501 / 2e-175 Sulfite exporter TauE/SafE family protein (.1) Potri.018G037400 [exp] 394 / 8e-133 AT2G25737 535 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.018G037500 [exp] 382 / 3e-128 AT2G25737 529 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.001G183400 [exp] 357 / 1e-118 AT2G25737 418 / 5e-143 Sulfite exporter TauE/SafE family protein (.1) Potri.001G183300 [exp] 354 / 1e-117 AT2G25737 381 / 2e-128 Sulfite exporter TauE/SafE family protein (.1) Potri.001G182700 [exp] 342 / 6e-113 AT2G25737 428 / 6e-147 Sulfite exporter TauE/SafE family protein (.1) Potri.006G117900 [exp] 280 / 9e-89 AT2G36630 578 / 0.0 Sulfite exporter TauE/SafE family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0292 [flax] [poplar] LysE PF01925 [flax] [poplar] TauE Sulfite exporter TauE/SafE
Representative CDS sequence Show only first row Show all	>Lus10026025 pacid=23173306 polypeptide=Lus10026025 locus=Lus10026025.g ID=Lus10026025.BGIv1.0 annot-version=v1.0 ATGATCAGGAGAATACACAAATGCAGAAGCAACTTCTCACTTGAAAGAGAGCTTAAGTACTATCAGATGACGAAGCTTAGCAAGAGATCGGTTGCAGCCT GGATGACAGTTGCTTGCCTGCTCACACTCAGAGCCACAGCCACTGCAGCTGATAGATTGTTAAGAGACAGCAACAAAAACAACATTGGCACTCATGAAGA GATTGTGCAGAAAGAAATGAGCAGTCATAAATTCCTGTTAGATCAAGTGGTTCATTTCCTCTGGCAGAGTGGCAAATCCTCCTATGACCCTGTCTGGCCT GAAATGGAGTTGAACTGGAAGATTGTGGTGGGAACAATAGTAGGCTTCTTTGGTGCTGCGTTTGGGAGTGTTGGTGGGGTTGGAGGTGGTGGCATTTTCG TTCCGATGCTCACTTTGATCGTCGGATTCGATCCCAAGTCTTCCACAGCTATTTCCAAGTGCATGATCATGGGTGCAGCAGGGTCAACGGTTTACTACAA CCTAAGACTCAGACATCCAACGTTAGACATGCCCCTAATTGACTATGATCTAGCCCTTATGTTTCAGCCAATGTTGATGCTCGGAATCAGCATTGGGGTT GCCTTCAATGTCATGTTCGCTGACTGGATGGTCACTGTTCTTCTTATCATCCTCTTTGTAGGGACATCCACAAAAGCTTTGATCAAAGGGATAGAAACAT GGAAGAAGGAAACAATGATGAAGAGGGAAGCAGCAGCCATGCTACCAAAACTGCAAGTTGATCAGAATGATAATAATGGTGATGGAGAAGAAGACTACAA GAGGCTGCCAAGTGGCCCTGCAGCTCTTCAAGATCACGATGATGAAGTTTCGTTTCTGCAGAACATATACTGGAAAGAGCTTGCAATGCTTATTTATGTT TGGGTTGGATTCCTCCTAGTTCAAATTGTTAAGACATATGTGGACACATGCTCGGTCACATACTGGATCTTGAATGCATTGCAGATACCAATTGCAGTAT CAGTAACAGCATTTGAAGCACTCTGCTTATGCAAAGGAACAAGGATCATAGCTTCCATAGGGAAACAAGAAGCGACAAAGAACTGGAAGGTGCATCAGAT ATTGGGCTTTTGTAGCTGCGGGATTGTGGCCGGAATGGTTGGTGGGCTTCTTGGGCTGGGCGGCGGATTCATCTTGGGCCCGCTATTTCTCGAGCTCGGA ATTCCTCCACAGGTGGCAAGTGCTACTTCCACTTTTGCAATGGCATTCTCGTCGTCCATGTCGGTGGTGCAATACTACATCCTCCGCCGATTTCCTGTTC CGTACGCGGCATATTTTGCGGTGGTGGCGACAATGGCGGCGCTGGTAGGGCAGCACGTGGTGAAGAGGATAATTGGAGTTGTCGGGAGGGCTTCGATCAT AATTTTCATACTGGCTTTGACCATTTTCGTGAGCGCGGTCAGCTTGGGGGGAGTTGGGATTGCTAATATGGTTGAGAAGTTACAGAAGGAAGAGTACATG GGATTTGACAGTTTCTGCCCCCGCCGTTGA
AA sequence Show only first row Show all	>Lus10026025 pacid=23173306 polypeptide=Lus10026025 locus=Lus10026025.g ID=Lus10026025.BGIv1.0 annot-version=v1.0 MIRRIHKCRSNFSLERELKYYQMTKLSKRSVAAWMTVACLLTLRATATAADRLLRDSNKNNIGTHEEIVQKEMSSHKFLLDQVVHFLWQSGKSSYDPVWP EMELNWKIVVGTIVGFFGAAFGSVGGVGGGGIFVPMLTLIVGFDPKSSTAISKCMIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALMFQPMLMLGISIGV AFNVMFADWMVTVLLIILFVGTSTKALIKGIETWKKETMMKREAAAMLPKLQVDQNDNNGDGEEDYKRLPSGPAALQDHDDEVSFLQNIYWKELAMLIYV WVGFLLVQIVKTYVDTCSVTYWILNALQIPIAVSVTAFEALCLCKGTRIIASIGKQEATKNWKVHQILGFCSCGIVAGMVGGLLGLGGGFILGPLFLELG IPPQVASATSTFAMAFSSSMSVVQYYILRRFPVPYAAYFAVVATMAALVGQHVVKRIIGVVGRASIIIFILALTIFVSAVSLGGVGIANMVEKLQKEEYM GFDSFCPRR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G25737			Sulfite exporter TauE/SafE fam...		Lus10026025 [exp]	0	1
AT1G24190		SNL3, AtSin3	ARABIDOPSIS THALIANA SIN3 HOMO...		Lus10042336 [exp]	4.2	0.8760
AT5G62440			Protein of unknown function (D...		Lus10022837 [exp]	6.0	0.8661
					Lus10001186 [exp]	7.7	0.8469
					Lus10000984 [exp]	9.2	0.8441
AT1G20330		FRL1, CVP1, SMT...	FRILL1, COTYLEDON VASCULAR PAT...		Lus10004158 [exp]	10.2	0.8441
AT1G06770		DRIP1	DREB2A-interacting protein 1 (...		Lus10042532 [exp]	11.2	0.8441
AT3G05550			Hypoxia-responsive family prot...		Lus10031490 [exp]	12.1	0.8441
					Lus10040014 [exp]	13.0	0.8441
AT5G44400			FAD-binding Berberine family p...		Lus10027162 [exp]	13.7	0.8441
					Lus10017835 [exp]	14.5	0.8441

Compare expression of checked genes

Lus10026025 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.