Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G36790 631 / 0 Major facilitator superfamily protein (.1) AT2G18590 517 / 0 Major facilitator superfamily protein (.1) AT5G10190 327 / 2e-107 Major facilitator superfamily protein (.1) AT1G78130 320 / 1e-104 UNE2 unfertilized embryo sac 2, Major facilitator superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041712 [exp] 723 / 0 AT4G36790 663 / 0.0 Major facilitator superfamily protein (.1) Lus10038972 [exp] 337 / 8e-111 AT5G10190 720 / 0.0 Major facilitator superfamily protein (.1) Lus10027264 [exp] 142 / 2e-39 AT5G10190 337 / 1e-114 Major facilitator superfamily protein (.1) Lus10027265 [exp] 69 / 8e-14 AT5G10190 129 / 3e-36 Major facilitator superfamily protein (.1) Lus10014328 [exp] 57 / 2e-09 ND / Lus10011580 [exp] 45 / 0.0002 AT5G64500 625 / 0.0 Major facilitator superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G030800 [exp] 673 / 0 AT4G36790 633 / 0.0 Major facilitator superfamily protein (.1) Potri.007G091800 [exp] 322 / 7e-105 AT5G10190 643 / 0.0 Major facilitator superfamily protein (.1) Potri.007G091700 [exp] 318 / 8e-104 AT5G10190 660 / 0.0 Major facilitator superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10026037 pacid=23173134 polypeptide=Lus10026037 locus=Lus10026037.g ID=Lus10026037.BGIv1.0 annot-version=v1.0 ATGGCTTCAATAATGGAGAGAGCAGACGAGAATCTGCTCCCTTCAGTCTACAAAGAAGTCAGCGAAGCCTTCAACGCCGGTCCATCAGATTTGGGGTACC TTACATTCATCAGAAACTTCGTTCAAGGAATCGCTTCCCCTATAGCTGGAATTCTAGTCATCAACTACGACCGTCCGACCATCTTAGCAATAGGGACTTT TTGCTGGGCGTTATCGACAGCTGCAGTGGGTGCAAGCCGCTATTTTTTTCAGGTGGCGTTCTGGAGGGCGGTTAATGGGTTGGGGTTGGCCATTGTGATT CCGGCACTCCAGTCTTTCATTGCTGATAGCTATGGGGATGGAGTTAGAGGTACTGGGTTTGGATTGGTTAGCTTGATTGGGAACTTGGGTGGGATTGGTG GTGGTGTTCTGGCTACTATTATGGCTGGTCATGAGTTTTGGGGTGTTTCCGGATGGAGATTCGCGTTTATGATGATGGCGTCGTTGAGTTCCGTCATTGG TTTCCTTGTGTTCGTGTATGTCGTTGATCCGAGGAAACCAATGGTAGCTGGTGGGGGTGTTGCACATAACAGCGGCTATGAGAGTCATGCCAGATATGAG CTAGTAGAAAAGAGCAGTAACACCACCACTGCTGCATCTTTATGGTTGGAGTCATGGAGATCCATACAAGCTGTTCTGAAAGTGAAGACTTTTCAAGTCA TTGTCTTGCAAGGAGTTGTAGGCTCTCTACCATGGACTGCAATGGTGTTCTTCACCTTGTGGTTCGAACTCATCGGTTTCGATCATAACAAAACTGCAGC ACTCATAAGCCTATTTGCATTCGGATGCTCAGCAGGCTCCCTACTAGGCGGAATCGTAGCAGATCGACTCTCTCGAGTTTATCCAAACTCGGGTAGGATC ATGTGCGCACAGCTGAGCGCATTCATGGGGATCCCATTCTCATTGCTCCTCTTAAGAATAATTCCACAGTCAGTAGATAGCTACAATGTATATGCCTTCA CCTTATTTGCAATGGGGCTCAGCATCAGCTGGTGTGCAACTGCTGCGAACGGTCCGATGTTTGCTGAGGTTGTCCCCACGAAGCACAGGACCATGATCTA CGCATTTGACCGTGCGTTCGAGGTTTCATTCTCGTCCTTTGCAGCTCCGTTGGTGGGGATACTGTCGGAGAAGGCGTTTGGTTATGACGTGAAGAGTGTT GACCCAATTCGAGGGTCAAAGGGGGAGGCGGCTGCTCTGTCGAAGGGGTTGCTGTCGATGATGGTGGTTCCTTTCGGGTTGTGTTCATTGTTTTACACTC CGTTGTATAAGTTCTTTAGGCATGATAGGGAGAGTGCTAGGTTGGCCACTGTCAAAGAGTTGGAGATGACTGATAGGCCGTAG
AA sequence Show only first row Show all	>Lus10026037 pacid=23173134 polypeptide=Lus10026037 locus=Lus10026037.g ID=Lus10026037.BGIv1.0 annot-version=v1.0 MASIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGIASPIAGILVINYDRPTILAIGTFCWALSTAAVGASRYFFQVAFWRAVNGLGLAIVI PALQSFIADSYGDGVRGTGFGLVSLIGNLGGIGGGVLATIMAGHEFWGVSGWRFAFMMMASLSSVIGFLVFVYVVDPRKPMVAGGGVAHNSGYESHARYE LVEKSSNTTTAASLWLESWRSIQAVLKVKTFQVIVLQGVVGSLPWTAMVFFTLWFELIGFDHNKTAALISLFAFGCSAGSLLGGIVADRLSRVYPNSGRI MCAQLSAFMGIPFSLLLLRIIPQSVDSYNVYAFTLFAMGLSISWCATAANGPMFAEVVPTKHRTMIYAFDRAFEVSFSSFAAPLVGILSEKAFGYDVKSV DPIRGSKGEAAALSKGLLSMMVVPFGLCSLFYTPLYKFFRHDRESARLATVKELEMTDRP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G36790			Major facilitator superfamily ...		Lus10026037 [exp]	0	1
AT2G41770			Protein of unknown function (D...		Lus10031076 [exp]	4.1	0.9389
AT5G45370			nodulin MtN21 /EamA-like trans...		Lus10035693 [exp]	5.1	0.9382
AT5G01360		TBL3	TRICHOME BIREFRINGENCE-LIKE 3,...		Lus10027813 [exp]	9.8	0.9367
AT3G13130			unknown protein		Lus10004415 [exp]	12.4	0.9190
AT4G35300		TMT2	tonoplast monosaccharide trans...		Lus10013208 [exp]	12.6	0.9073
AT5G45370			nodulin MtN21 /EamA-like trans...		Lus10037284 [exp]	14.2	0.9125
AT1G71070			Core-2/I-branching beta-1,6-N-...		Lus10033379 [exp]	15.3	0.9075
AT3G55990		TBL29, ESK1	TRICHOME BIREFRINGENCE-LIKE 29...		Lus10007497 [exp]	17.3	0.9216
AT5G49720		TSD1, IRX2, DEC...	TUMOROUS SHOOT DEVELOPMENT 1, ...		Lus10007584 [exp]	20.8	0.9145
AT1G32770	NAC	NST3, ANAC012, ...	SECONDARY WALL-ASSOCIATED NAC ...		Lus10001664 [exp]	23.7	0.9081

Compare expression of checked genes

Lus10026037 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.