Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G38720 553 / 0 MAP65-5 microtubule-associated protein 65-5 (.1) AT4G26760 509 / 2e-175 MAP65-2 microtubule-associated protein 65-2 (.1) AT5G55230 484 / 1e-165 ATMAP65-1 microtubule-associated proteins 65-1 (.1.2) AT1G14690 440 / 4e-148 MAP65-7 microtubule-associated protein 65-7 (.1.2) AT2G01910 415 / 2e-138 ATMAP65-6 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) AT1G27920 387 / 3e-128 MAP65-8 microtubule-associated protein 65-8 (.1) AT5G51600 370 / 9e-120 ATMAP65-3, PLE PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) AT3G60840 332 / 7e-106 MAP65-4 microtubule-associated protein 65-4 (.1) AT5G62250 309 / 3e-98 MAP65-9 microtubule-associated protein 65-9 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10008705 [exp] 1083 / 0 AT2G38720 565 / 0.0 microtubule-associated protein 65-5 (.1) Lus10041635 [exp] 827 / 0 AT2G38720 550 / 0.0 microtubule-associated protein 65-5 (.1) Lus10032567 [exp] 498 / 6e-170 AT5G55230 850 / 0.0 microtubule-associated proteins 65-1 (.1.2) Lus10043178 [exp] 491 / 2e-166 AT5G55230 847 / 0.0 microtubule-associated proteins 65-1 (.1.2) Lus10031939 [exp] 439 / 1e-147 AT2G01910 838 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Lus10035099 [exp] 435 / 5e-146 AT2G01910 822 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Lus10015684 [exp] 412 / 2e-135 AT5G51600 759 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Lus10037691 [exp] 409 / 1e-134 AT5G51600 768 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Lus10015789 [exp] 395 / 6e-131 AT1G27920 673 / 0.0 microtubule-associated protein 65-8 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G192400 [exp] 722 / 0 AT2G38720 555 / 0.0 microtubule-associated protein 65-5 (.1) Potri.011G092500 [exp] 535 / 0 AT5G55230 863 / 0.0 microtubule-associated proteins 65-1 (.1.2) Potri.001G356500 [exp] 508 / 3e-175 AT5G55230 853 / 0.0 microtubule-associated proteins 65-1 (.1.2) Potri.008G139700 [exp] 432 / 4e-145 AT2G01910 778 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Potri.003G173300 [exp] 424 / 3e-142 AT1G27920 655 / 0.0 microtubule-associated protein 65-8 (.1) Potri.001G055100 [exp] 399 / 5e-132 AT1G27920 623 / 0.0 microtubule-associated protein 65-8 (.1) Potri.015G131400 [exp] 397 / 5e-130 AT5G51600 728 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.014G070100 [exp] 387 / 2e-126 AT5G51600 451 / 5e-149 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.012G129600 [exp] 385 / 2e-125 AT5G51600 761 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.001G032566 [exp] 162 / 1e-47 AT2G38720 135 / 6e-38 microtubule-associated protein 65-5 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03999 [flax] [poplar] MAP65_ASE1 Microtubule associated protein (MAP65/ASE1 family)
Representative CDS sequence Show only first row Show all	>Lus10026114 pacid=23173195 polypeptide=Lus10026114 locus=Lus10026114.g ID=Lus10026114.BGIv1.0 annot-version=v1.0 ATGGCGGCGAAATCACCAGCTCTCATTTCTCCCTCTCGCACCGCTTGTCACTCACTCCTCCAGGAACTGCAGGTAATATGGAATGAAATCGGGGAGCAAG AAGGTGAAATGGACAGGATGCTTGAGCAACTTGAACAAGAGTGCCTTGAAATCTACCGTAGAAAGGTTGATCTCACCAGAAAACACAAAGCTGAATTGGC TCAGTCATTGGCTGAGGGAGAAACTGAAATCGCAGACCTTGTTTCTGCTCTTGGCGAAACTTCCTCGTTTTCCCAGTTGAAGAGGGTGAAAGGCACTTTG AAGCAGCAATTATCCGCTGTGAAACCGGTTTTGCAAGACTTGAGACAGAGGAAACAAGTACGAGTGAGTGAGTTTTATGAAATTCAGTTGCAGATTGCTC AAATCTGCGCTGAAATAGCTGGGAAAGATCTTTCTAGCTATGCCGTTGATCTGAAAATTGATGAGTGCGATTTGACCGTGAAGAGATTGGGGGAGCTTAA GTCATACCTCAAGGAACTTCAGACAGAAAAGAATTTACGTCTGCATAAAGTTAGGAGCTCTATTGCTAAAATTCAAGAGCTCTCAGTCATAATGTCTGTC GATTACTCCAAAACTGTTGCTGATATCCATCCCTCCTTAAATGATCATGCTCAGCCAAAGAGCATAAGCAATGACACACTAGCTCGATTAACTAGTGTGA TTCAATCATTAAAGCAGGAGAAGCAGGAAAGACTACATAAGCTCCAAAATCTTGGGAAGAAACTGGTAGAGCTTTGGGAGCTGATGGACACAGATATAGA GGAACAACGAAAGTTTGATCATGTTACTTCATTAATTTCTTCCTCAGTGGATGAGGCATCAAAACAGGGTTGCCTTGCCCTTGAAGTCAGTGAGCAGGCT GAGGTTGAACTTGAGAGACTGAATGTTCTCAAAGCCAGCAAGATGAAGGAGTTGGTGTTGAAGAGACAGATTGAGCTGGAAGCACTATACAGAGATGTTC ATGTGGATATAGATAGTGATGCAGCAAGGGAGATGCTTATCAGTCTCATTGAATCTGGTAACGTCGAGCTCTCTGATCTGCTTTCAAGTATAGACGACCA GATAACAGATGCCAAAGAACTAGCAGTAAGCCGGAAGGAGGTTTTAGACAAGATGGAGAAATGGAAACATGCATCTGAGGAAGAAAAGTGGCTTGAAGAC TATGAAAAGGACCAAAATCGGTACAACGCCGGGAGAGGTGCGCATAAAAATTTGAAACGTGCAGAGAAGGCAAGAATTCTGGTGGGAAAATTACCATCTA TGGTTGAAAATCTGACTTCGAAAGTGAAAGCCTGGGAATCAGAGAGAGGCCTTACATTCCAGTATGATAAGGCTCCTCTGTTACGGACGTTGGAGGAATA TATGGCTACGAGGCAGGGAAGGGAAGACGAGAAGCGTAGAATGAAGGAGCAGAAACGTCTACAGGAGCAAATGGCTGTGGAGAAAGAGGCTATTTACGGC TCAAGGCCGAAGAAAGTCCTTGGTCAAAACACCAGCACAGCCAATACCATGTTCGGAACGCCTATGGGACGATCGTTGGGGCGTCAGGCAGCGTCAGGTG CAAAGGAACGTAGAGAGAGCAGGTACCATAACGTGACTCCTATCAACTATGTAGCACTCCCAAAGGACGACCACCCTGCTTCTCGTGGTTTGTTAGAGGA TGAGGAGATCAAATTGACCTTTGCTTCTCGTCATCAATAG
AA sequence Show only first row Show all	>Lus10026114 pacid=23173195 polypeptide=Lus10026114 locus=Lus10026114.g ID=Lus10026114.BGIv1.0 annot-version=v1.0 MAAKSPALISPSRTACHSLLQELQVIWNEIGEQEGEMDRMLEQLEQECLEIYRRKVDLTRKHKAELAQSLAEGETEIADLVSALGETSSFSQLKRVKGTL KQQLSAVKPVLQDLRQRKQVRVSEFYEIQLQIAQICAEIAGKDLSSYAVDLKIDECDLTVKRLGELKSYLKELQTEKNLRLHKVRSSIAKIQELSVIMSV DYSKTVADIHPSLNDHAQPKSISNDTLARLTSVIQSLKQEKQERLHKLQNLGKKLVELWELMDTDIEEQRKFDHVTSLISSSVDEASKQGCLALEVSEQA EVELERLNVLKASKMKELVLKRQIELEALYRDVHVDIDSDAAREMLISLIESGNVELSDLLSSIDDQITDAKELAVSRKEVLDKMEKWKHASEEEKWLED YEKDQNRYNAGRGAHKNLKRAEKARILVGKLPSMVENLTSKVKAWESERGLTFQYDKAPLLRTLEEYMATRQGREDEKRRMKEQKRLQEQMAVEKEAIYG SRPKKVLGQNTSTANTMFGTPMGRSLGRQAASGAKERRESRYHNVTPINYVALPKDDHPASRGLLEDEEIKLTFASRHQ

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G38720		MAP65-5	microtubule-associated protein...		Lus10026114 [exp]	0	1
AT1G21740			Protein of unknown function (D...		Lus10024007 [exp]	2.6	0.9666
AT4G35240			Protein of unknown function (D...		Lus10025077 [exp]	3.2	0.9501
AT5G59010			Protein kinase protein with te...		Lus10016454 [exp]	7.5	0.9333
AT5G51560			Leucine-rich repeat protein ki...		Lus10031703 [exp]	10.0	0.9471
AT2G35640	Trihelix		Homeodomain-like superfamily p...		Lus10018283 [exp]	10.1	0.9491
AT5G48170		SNE, SLY2	SNEEZY, SLEEPY2, F-box family ...		Lus10012335 [exp]	11.0	0.8874
AT2G28490			RmlC-like cupins superfamily p...		Lus10011364 [exp]	12.1	0.9417
AT3G06520			agenet domain-containing prote...		Lus10017088 [exp]	15.7	0.9382
AT2G20470			AGC (cAMP-dependent, cGMP-depe...		Lus10003541 [exp]	15.9	0.9011
AT2G45190	YABBY	FIL, YAB1, AFO	YABBY1, FILAMENTOUS FLOWER, AB...		Lus10032240 [exp]	16.6	0.9422

Compare expression of checked genes

Lus10026114 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.