Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G03210 305 / 5e-100 ATFUT2, FUT2 fucosyltransferase 2 (.1) AT2G03220 283 / 6e-91 ATFUT1, ATFT1, FT1, MUR2 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) AT1G14100 267 / 2e-85 FUT8 fucosyltransferase 8 (.1) AT1G14070 261 / 3e-83 FUT7 fucosyltransferase 7 (.1) AT2G15390 251 / 1e-79 ATFUT4, FUT4 fucosyltransferase 4 (.1.2) AT2G15350 242 / 2e-76 ATFUT10, FUT10 fucosyltransferase 10 (.1) AT1G14080 238 / 5e-74 ATFUT6, FUT6 fucosyltransferase 6 (.1) AT2G15370 234 / 1e-72 ATFUT5, FUT5 ARABIDOPSIS FUCOSYLTRANSFERASE 5, fucosyltransferase 5 (.1) AT1G14110 231 / 3e-72 ATFUT9, FUT9 fucosyltransferase 9 (.1) AT1G74420 191 / 5e-56 ATFUT3, FUT3 fucosyltransferase 3 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10008693 [exp] 715 / 0 AT2G03210 305 / 6e-100 fucosyltransferase 2 (.1) Lus10041644 [exp] 399 / 9e-137 AT2G03220 379 / 7e-126 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10012571 [exp] 397 / 8e-136 AT2G03220 349 / 7e-114 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10024076 [exp] 396 / 9e-136 AT2G03220 374 / 5e-124 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10041645 [exp] 389 / 2e-133 AT2G03220 315 / 2e-101 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10041642 [exp] 342 / 4e-114 AT2G03220 454 / 8e-155 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10026128 [exp] 328 / 9e-109 AT2G03220 395 / 4e-132 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10013549 [exp] 303 / 3e-99 AT2G03220 357 / 4e-117 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10008696 [exp] 304 / 4e-99 AT2G03220 504 / 3e-174 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G191200 [exp] 332 / 6e-110 AT2G03220 570 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.003G191500 [exp] 323 / 1e-106 AT2G03220 570 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.001G034100 [exp] 321 / 6e-106 AT2G03220 560 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.008G090000 [exp] 315 / 3e-103 AT2G03220 744 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.001G033800 [exp] 314 / 6e-102 AT2G03220 524 / 3e-180 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.003G191401 [exp] 302 / 4e-97 AT2G03220 555 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.003G191301 [exp] 276 / 2e-87 AT2G03220 524 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03254 [flax] [poplar] XG_FTase Xyloglucan fucosyltransferase
Representative CDS sequence Show only first row Show all	>Lus10026125 pacid=23173167 polypeptide=Lus10026125 locus=Lus10026125.g ID=Lus10026125.BGIv1.0 annot-version=v1.0 ATGGTGGATCTATTCTGCGAGCCGTTTCTGAACTCGACCTGGTATTTACCTGAAACTTTTCCTTTCAGATTTAAATTCTACACATATGGATTCAGAGAGA GTTACAGCTACGGGAGTATACTGCGGAAGAATGATAATAAGCCGCCGGCGGATTCGTCGCCAGCGCCGTCCATGGTCCAGATCTTCCTCCACGATAAGTA CAACGAGTACGACAAGCTCTTCTTCAAAGACGAGAATCAAGCGTTTCTGCAGAGAGTCCCCTGGCTGATTGTAATGGGAGATGGATATTCCATCCCTTGC ATGTTTCAGATGAAGTCTTTTCGATCCGAATTGACCAAATTGTTTCCGGATGAAGGGAAAGTGTTTCACCATTTGGGGAGGTACTTGTTCAGCCCTTCCA ATCAAGCTTGGGAGCTCATCACCAGGTTCTATGATTCGTACCTGGCGAAATCGGAGGAGAAAATCGGGATTCAAATCAGGGTTTTCGAGCCGAAGCAAGT CTCGCATTCAGTCGTAATGAATCAGATCCTAAACTGTACACATAAGGAGAAAATCCTTCCCATTTCTGCACCTTCCTCCAACCAAACAACAACGAAATCC GTCCTGATTGCATCATTGTCGAAGAAATTCTACGAGGAGATCAATTCGATCTACGGTCGAACCGGAAGTGGGATCGGAGTGTATCAGGCGAGTCACGAAG AGAAGCAGCATTCCGGTGATCTCACCCACAACATGAAAGCCTGGGTGGATATTTATCTGTTGAGTATGAGCAATAAGTTAGTGACTAGCAGAATGTCGAC GTTCGGATATGTGGCGGCGGGCCTCGGCGCGTTGAGGCCGTGGATTGTGATGACCCCTGATCCTGATCACGGCGGCGGGATTCCGGTGCCGTCTTGCGAG AGAGGTTGGAATACAGAGCCGTGCTTCCATTTCCCGCCGTGGTTTGCTTATCCTGATCAGCCTGGGAACGATGCGAAGAATGTCGGACGGTGTGAAGACG TGCCGTGGGGATTGAAGCTCGTCGATGGGTACAATGGGAAGAAAGGTTAG
AA sequence Show only first row Show all	>Lus10026125 pacid=23173167 polypeptide=Lus10026125 locus=Lus10026125.g ID=Lus10026125.BGIv1.0 annot-version=v1.0 MVDLFCEPFLNSTWYLPETFPFRFKFYTYGFRESYSYGSILRKNDNKPPADSSPAPSMVQIFLHDKYNEYDKLFFKDENQAFLQRVPWLIVMGDGYSIPC MFQMKSFRSELTKLFPDEGKVFHHLGRYLFSPSNQAWELITRFYDSYLAKSEEKIGIQIRVFEPKQVSHSVVMNQILNCTHKEKILPISAPSSNQTTTKS VLIASLSKKFYEEINSIYGRTGSGIGVYQASHEEKQHSGDLTHNMKAWVDIYLLSMSNKLVTSRMSTFGYVAAGLGALRPWIVMTPDPDHGGGIPVPSCE RGWNTEPCFHFPPWFAYPDQPGNDAKNVGRCEDVPWGLKLVDGYNGKKG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G03210		ATFUT2, FUT2	fucosyltransferase 2 (.1)		Lus10026125 [exp]	0	1
AT2G15490		UGT73B4	UDP-glycosyltransferase 73B4 (...		Lus10014084 [exp]	3.0	0.7585
AT1G44350		ILL6	IAA-leucine resistant (ILR)-li...		Lus10018169 [exp]	3.6	0.7702
AT5G20480		EFR	EF-TU receptor (.1)		Lus10024681 [exp]	8.9	0.7557
AT5G53110			RING/U-box superfamily protein...		Lus10019018 [exp]	9.1	0.7662
AT5G12970			Calcium-dependent lipid-bindin...		Lus10017816 [exp]	15.6	0.6424
AT2G31880		SOBIR1, EVR	SUPPRESSOR OF BIR1 1, EVERSHED...		Lus10033041 [exp]	21.4	0.7558
AT2G43060	bHLH	AtIBH1, bHLH158	ILI1 binding bHLH 1 (.1)		Lus10026730 [exp]	24.4	0.7488
AT2G45910			U-box domain-containing protei...		Lus10016557 [exp]	29.7	0.7319
AT5G26170	WRKY	ATWRKY50, WRKY5...	ARABIDOPSIS THALIANA WRKY DNA-...		Lus10006848 [exp]	36.8	0.7498
AT5G53590			SAUR-like auxin-responsive pro...		Lus10006820 [exp]	38.0	0.6242

Compare expression of checked genes

Lus10026125 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.