Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026169 [exp] 82 / 7e-20 AT4G05200 51 / 4e-08 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 (.1) Lus10008656 [exp] 81 / 3e-19 AT4G05200 44 / 8e-06 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 (.1) Lus10016710 [exp] 44 / 3e-05 AT2G01660 318 / 1e-108 plasmodesmata-located protein 6 (.1.2) Lus10028026 [exp] 41 / 0.0001 AT4G23290 44 / 1e-05 cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (.1), cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (.2) Lus10008657 [exp] 41 / 0.0001 ND /
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G208400 [exp] 52 / 8e-09 AT5G48540 52 / 1e-08 receptor-like protein kinase-related family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF01657 [flax] [poplar] Stress-antifung Salt stress response/antifungal
Representative CDS sequence Show only first row Show all	>Lus10026168 pacid=23173264 polypeptide=Lus10026168 locus=Lus10026168.g ID=Lus10026168.BGIv1.0 annot-version=v1.0 ATGAAGGCGTTGATTATACTAGTATGTGTAGGGACGACGTTGATGGTCATAAGCCAAGCTGATTTGGACCAAGATCCAGTATGCAACCAGATGGCGATAC CAGACGGGGACCCGTATGCGAGGGCGCTAGCGAAAGTGTTGCAGGACATCTTCAGCGAAGTGCCGAAGCTGATCTATCCCGTCAACGAATACTGCACGAG CGGCTCTTATAAAAAAGTCAAAGCGTATGGTTCGGGGTCATGCTTCGGCGAGATTGTGGACTGCGTTACTTGCTTGGGGGACGCGCTGACTGCGATTTCG GGTGCATGCGGGAGTACCTACGGTGCTCAAGTCGCCATTCCCGGATGTTCCTTGAGGAGTTCCAATCTGCAGCAGCTGGATGATCAAAGACGGGGACCAG ATGGCCGGGGCGATCGTTATGCTCACGAAGAAGATCCTGAACCGCTCGACCAAGATCAAAAGCCCATCCGTACTGCACGAGTGCGTTTAATAAAGGCACC ACTGCCTATGGTTCGGCGTCCTGTTCCAAAGAGGTTGAGGACTGCAGAAGCTGCTTGCTGGACGCGTTGGACGCCATATCTCGGACCTGTGGGAGTACCT ATGCCGGTTTAG
AA sequence Show only first row Show all	>Lus10026168 pacid=23173264 polypeptide=Lus10026168 locus=Lus10026168.g ID=Lus10026168.BGIv1.0 annot-version=v1.0 MKALIILVCVGTTLMVISQADLDQDPVCNQMAIPDGDPYARALAKVLQDIFSEVPKLIYPVNEYCTSGSYKKVKAYGSGSCFGEIVDCVTCLGDALTAIS GACGSTYGAQVAIPGCSLRSSNLQQLDDQRRGPDGRGDRYAHEEDPEPLDQDQKPIRTARVRLIKAPLPMVRRPVPKRLRTAEAACWTRWTPYLGPVGVP MPV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10026168 [exp]	0	1
AT5G14180		MPL1	Myzus persicae-induced lipase ...		Lus10026167 [exp]	1.0	0.8721
AT3G25400			unknown protein		Lus10003475 [exp]	4.4	0.7463
AT1G71110			unknown protein		Lus10007962 [exp]	7.6	0.7996
AT3G12490		ATCYS6, ATCYSB	ARABIDOPSIS THALIANA PHYTOCYST...		Lus10008702 [exp]	10.5	0.7982
AT3G27730		MER3, RCK	ROCK-N-ROLLERS, ATP binding;AT...		Lus10014551 [exp]	13.3	0.7864
AT1G71360			Galactose-binding protein (.1)		Lus10002929 [exp]	16.4	0.7696
AT2G28500	AS2	LBD11	LOB domain-containing protein ...		Lus10011645 [exp]	17.5	0.7476
AT3G05030		ATNHX2, NHX2	sodium hydrogen exchanger 2 (....		Lus10040903 [exp]	18.3	0.7791
AT3G48260		WNK3	with no lysine (K) kinase 3 (....		Lus10041947 [exp]	19.2	0.7692
AT5G58610			PHD finger transcription facto...		Lus10025387 [exp]	21.7	0.7685

Compare expression of checked genes

Lus10026168 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.