Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G49800 289 / 2e-98 Polyketide cyclase/dehydrase and lipid transport superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042398 [exp] 468 / 3e-168 AT5G49800 298 / 9e-102 Polyketide cyclase/dehydrase and lipid transport superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G231000 [exp] 318 / 9e-110 AT5G49800 374 / 7e-133 Polyketide cyclase/dehydrase and lipid transport superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0209 [flax] [poplar] Bet_v_1_like PF01852 [flax] [poplar] START START domain
Representative CDS sequence Show only first row Show all	>Lus10026274 pacid=23156557 polypeptide=Lus10026274 locus=Lus10026274.g ID=Lus10026274.BGIv1.0 annot-version=v1.0 ATGGATAGTTCAACGGCTCCGCACTGTCGAAGGTCTTGGTCCATAAGTGAAGAGTCGTTGAAGAGGTACGTGCATTTTGCGAGCGAGAGCTGCATACAGG AGTTGCTGTCAGCCTCTTCAAGTTCAGACCTGCTGTCCAACAGCAACAACGGTGAAGAATGGAAGATCCTAAGCAGCAGTCAGGAAGAGAATGGTTGCGG AGTTGAGATTTCCAAACGTAGGGGTGCCAGTGGATCATCATTTCCTGCCTTCCGCAGCCGCTCTATCCTCAAATCAGTTTCACCTCAACAGTTCATCTCT GTGGCCAATGCCATTGATGCAGCCAGGCAATGGGATTCGGATCTAGTGGAAGCTAGATACATAAAAGACGTAGATGAGAATCTGAGCATAATACAGTTGA GGTACGGAGAGAAGTCGAAGCAGCCGCTGTTTAGGAACAGGGAGTTTGTGGTGTACGAGAGGCGGGAGACGATGGAAGATGGGACGGTGGTGGTGGCAGT GGCATCGCTGCCCAAGGAGATGGCTGCCGGGTTAGGTTTGGAACAGCAGCATCATGTGTGTGGTGGTAGTAGTAATCATCATAGCAGCAGGCCAAAGAAC AATGCCATAAGAGGGCTGCTACTGAACTCAGGTTGGGTGGTGGAGAAGCTTCAGCATGACTCCTCCTGCTGCATGGTCACGTACGTTGTTCAGGTTGATC CAGGTGGAGCTGGGTGGCTACCGAGGTGCTTTGTAAATCGCCTCAACACCAAGCTTGTCATGATCATCGATAAGCTCCGTAACATTGCCCAATCATGTCC CAAAACTTCGCAATCTGCTGGTGCAGGATTGTCATCTCATCAACGTCCTTGTGACCAAGGATGA
AA sequence Show only first row Show all	>Lus10026274 pacid=23156557 polypeptide=Lus10026274 locus=Lus10026274.g ID=Lus10026274.BGIv1.0 annot-version=v1.0 MDSSTAPHCRRSWSISEESLKRYVHFASESCIQELLSASSSSDLLSNSNNGEEWKILSSSQEENGCGVEISKRRGASGSSFPAFRSRSILKSVSPQQFIS VANAIDAARQWDSDLVEARYIKDVDENLSIIQLRYGEKSKQPLFRNREFVVYERRETMEDGTVVVAVASLPKEMAAGLGLEQQHHVCGGSSNHHSSRPKN NAIRGLLLNSGWVVEKLQHDSSCCMVTYVVQVDPGGAGWLPRCFVNRLNTKLVMIIDKLRNIAQSCPKTSQSAGAGLSSHQRPCDQG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G49800			Polyketide cyclase/dehydrase a...		Lus10026274 [exp]	0	1
AT5G49800			Polyketide cyclase/dehydrase a...		Lus10042398 [exp]	1.0	0.8871
AT2G03500	GARP		Homeodomain-like superfamily p...		Lus10027927 [exp]	2.0	0.8202
AT2G32580			Protein of unknown function (D...		Lus10035349 [exp]	3.5	0.8341
AT3G06070			unknown protein		Lus10010508 [exp]	6.9	0.8294
AT4G11410			NAD(P)-binding Rossmann-fold s...		Lus10024649 [exp]	11.3	0.7704
AT1G28110		SCPL45	serine carboxypeptidase-like 4...		Lus10030315 [exp]	15.0	0.7350
AT1G13245		RTFL17, DVL4	DEVIL 4, ROTUNDIFOLIA like 17 ...		Lus10034272 [exp]	15.7	0.8100
AT5G07980			dentin sialophosphoprotein-rel...		Lus10034692 [exp]	18.7	0.7791
AT5G35670		IQD33	IQ-domain 33 (.1)		Lus10000919 [exp]	19.4	0.7515
AT4G13540			unknown protein		Lus10004393 [exp]	22.5	0.7595

Compare expression of checked genes

Lus10026274 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.