Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G16630 158 / 3e-45 Pollen Ole e 1 allergen and extensin family protein (.1) AT5G15780 43 / 0.0002 Pollen Ole e 1 allergen and extensin family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042394 [exp] 239 / 8e-77 AT2G16630 281 / 4e-93 Pollen Ole e 1 allergen and extensin family protein (.1) Lus10024890 [exp] 46 / 9e-06 AT2G20515 154 / 2e-48 unknown protein Lus10022928 [exp] 44 / 4e-05 AT2G20515 173 / 3e-56 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G169200 [exp] 179 / 3e-53 AT2G16630 186 / 1e-55 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.002G060800 [exp] 47 / 6e-06 AT2G42840 167 / 4e-50 protodermal factor 1 (.1) Potri.005G200900 [exp] 46 / 2e-05 AT2G42840 163 / 4e-48 protodermal factor 1 (.1) Potri.005G224600 [exp] 42 / 0.0002 AT2G20515 177 / 8e-58 unknown protein Potri.002G038200 [exp] 40 / 0.0005 AT2G20515 189 / 2e-62 unknown protein
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0287 [flax] [poplar] Transthyretin PF01190 [flax] [poplar] Pollen_Ole_e_1 Pollen protein Ole e 1 like
Representative CDS sequence Show only first row Show all	>Lus10026279 pacid=23156566 polypeptide=Lus10026279 locus=Lus10026279.g ID=Lus10026279.BGIv1.0 annot-version=v1.0 ATGGATTGGTCATCATGCTGCAAGCTGCTCTTCTCAGTGGCTCTCCTCCTTTCAGCAGTCATTGATGGAGCTCGAGCAGATGCCACTGTATCCGGCTCTG TCTTCTGCGACCAATGCAAAGACGGTCAACTCTCTCTTTTCGACTACCCCATGACTGGGGTGAGGGTAACAATGGCGTGTGTGGATGAGAATGGGGAAAC GTTGATGTCAAGAGAAGAGAGGACAAACATGTTTGGGTGGTACAATATAAGGTTCGACGGAACCCCGGATTTGAGGAACTGCTATACCCAATTTGCCCCT GATTCTTCTTCAACAGGGGAAGGAAGTAGTAGTGGCGGTGGCTCTGCTAATTCATGTATCGCAGCAGCTGGGCCTCCTCAGAAATTGAGGCTCATGTTCA ATATGTTTGGAATGGAGATGTACAGTGTTGATTCTTTGCTGTCTCAGCCTGCTAAACCCATGTCCTTTTGCCCCAATTCCTCATCTTCCTCGCCGTCAAT CCCATCTTCTAATGTCCCACCACCACCACCGCCATCACTTCCTTCTTCTTCTTCCCCTCCTCCTCCTCCTTCTCCTCCAGCTTTCACGATTCCTCCATTG CCGCCCATGCCATTCACGGAAGCTTCTGCTTGTCCTCACCAGACATGGACGGCGGCAGAGTACAGATGCTTCTGGAGAATAGTGACGCCAGAGACAAAAG TAGCCGTTGCATTTGGGCTGCCGGCGGCCCAAAGGTACGGAACAGAGATGACACTGTTGGAGGCACTGCAAGGGAGAGGGGACCCTTACAGGACGCTACT GAGGGAAGCCACAACCTCGCTCCTCAACTCCTACAACAGCCTACGCTTCCGTTACGACGCCGTCAGTGTGGTGGCGCGTACAAACTACGCGCTGTTGGGA TCTCAGAGGGATGCTCTGTATACAGCTCTGCGCTTCATTAGGGCCAATTCTGGGTCTCCGTGTGCAGCTCCTGGCTCCCCCGCCGTGACTTGCAGATTGT CTCCCTGCAAGTGA
AA sequence Show only first row Show all	>Lus10026279 pacid=23156566 polypeptide=Lus10026279 locus=Lus10026279.g ID=Lus10026279.BGIv1.0 annot-version=v1.0 MDWSSCCKLLFSVALLLSAVIDGARADATVSGSVFCDQCKDGQLSLFDYPMTGVRVTMACVDENGETLMSREERTNMFGWYNIRFDGTPDLRNCYTQFAP DSSSTGEGSSSGGGSANSCIAAAGPPQKLRLMFNMFGMEMYSVDSLLSQPAKPMSFCPNSSSSSPSIPSSNVPPPPPPSLPSSSSPPPPPSPPAFTIPPL PPMPFTEASACPHQTWTAAEYRCFWRIVTPETKVAVAFGLPAAQRYGTEMTLLEALQGRGDPYRTLLREATTSLLNSYNSLRFRYDAVSVVARTNYALLG SQRDALYTALRFIRANSGSPCAAPGSPAVTCRLSPCK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G16630			Pollen Ole e 1 allergen and ex...		Lus10026279 [exp]	0	1
AT3G26510			Octicosapeptide/Phox/Bem1p fam...		Lus10006214 [exp]	1.0	0.9791
AT3G05610			Plant invertase/pectin methyle...		Lus10031469 [exp]	2.8	0.9476
AT3G19550			unknown protein		Lus10002115 [exp]	4.0	0.9668
AT2G23110			Late embryogenesis abundant pr...		Lus10029709 [exp]	4.2	0.9450
AT3G19550			unknown protein		Lus10002114 [exp]	5.5	0.9655
AT1G29010			unknown protein		Lus10013977 [exp]	6.0	0.9502
AT3G19550			unknown protein		Lus10013901 [exp]	7.2	0.9573
AT1G50380			Prolyl oligopeptidase family p...		Lus10032964 [exp]	8.7	0.9537
AT5G59320		LTP3	lipid transfer protein 3 (.1)		Lus10026418 [exp]	10.4	0.9325
					Lus10038743 [exp]	12.6	0.9415

Compare expression of checked genes

Lus10026279 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.