Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G25640 46 / 2e-05 FFT, ATDTX35 FLOWER FLAVONOID TRANSPORTER, detoxifying efflux carrier 35 (.1.2) AT1G47530 44 / 7e-05 MATE efflux family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042343 [exp] 316 / 5e-106 AT1G47530 486 / 8e-170 MATE efflux family protein (.1) Lus10042344 [exp] 90 / 7e-20 AT1G47530 521 / 0.0 MATE efflux family protein (.1) Lus10026323 [exp] 79 / 3e-16 AT1G47530 525 / 0.0 MATE efflux family protein (.1) Lus10036851 [exp] 64 / 3e-11 AT3G26590 675 / 0.0 MATE efflux family protein (.1) Lus10036854 [exp] 61 / 3e-10 AT3G26590 666 / 0.0 MATE efflux family protein (.1) Lus10006206 [exp] 61 / 3e-10 AT3G26590 664 / 0.0 MATE efflux family protein (.1) Lus10036852 [exp] 54 / 5e-08 AT1G23300 598 / 0.0 MATE efflux family protein (.1) Lus10027504 [exp] 50 / 1e-06 AT4G25640 683 / 0.0 FLOWER FLAVONOID TRANSPORTER, detoxifying efflux carrier 35 (.1.2) Lus10042130 [exp] 50 / 1e-06 AT1G47530 704 / 0.0 MATE efflux family protein (.1)
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026324 pacid=23156546 polypeptide=Lus10026324 locus=Lus10026324.g ID=Lus10026324.BGIv1.0 annot-version=v1.0 ATGGAGAGAATCCAAGATGATGTGGGAAATAGCAGCACCAATCATGCTAAGTGCAGTAGCTCAATTCTTTCTCGGCTTCATCACCTCTGCTTTCGTCGGA CGCTTGGGAGAAGTCCAGCTCGCCGCCGTCTCCATCGTTCAGAACGTCCTACAAGTCTTTGTCTTTGGAATCATGCTCGGAATGGCGAGCGTCTTGGAGA CACTATGCTGGCAAGCAGTAGGAGGAGGCCAATTCAACATGCTAGGAATCTACTTGGAGAGGTCATGGATCACAACAATTGTTACATGACTACCCCTGGT GCCCCTCTACTTGTTTGCATCTCCGGTTCTGAAGCTACTCCGTCAGGACCACGATATTTCGCGACTCGCTGGGAAATTCTCAGTGTGAATTCTGCCTCAG CTATTCGCCGTGGCACTGGGCTTACCCATCCAGAAATTCCTGCAGGCTCAGAGCAAAGTGTGGGTGGTAACCGTGATCTCCGTCCTTGTTCTGCCCATTC ACGTGTTGCTGAATTGGGTCCTGATCACCAAACTCGGACACGGCATCGTTGGTGCAGCCGTAGCAGGGAATGTGTCGTGGTTGATCATAGTTGGCGTATG TGTCGTGTGGGTTCTTCCCTGAAGCTTGGACTGGATTCTCGTTCAAGGCTTTCGAGTCACTCTCGGGATTCGTCAAGCTCTCCCTTTCCTCTGCCTTTGG AGCTTTGGTACACTACGATATTGATGCTGATGGTTGGGTGGTTGAAGAACCCAGAGATTGATGATGTGGATAATTCAAGTCGCTTGCTTCTGGGGAACAG TTTGAATGTGCAGATATGGACTCTAATGATTGCATTAGGTTTCAACGCACTTTCATACCCACCTGTGTACACGTTTTAA
AA sequence Show only first row Show all	>Lus10026324 pacid=23156546 polypeptide=Lus10026324 locus=Lus10026324.g ID=Lus10026324.BGIv1.0 annot-version=v1.0 MERIQDDVGNSSTNHAKCSSSILSRLHHLCFRRTLGRSPARRRLHRSERPTSLCLWNHARNGERLGDTMLASSRRRPIQHARNLLGEVMDHNNCYMTTPG APLLVCISGSEATPSGPRYFATRWEILSVNSASAIRRGTGLTHPEIPAGSEQSVGGNRDLRPCSAHSRVAELGPDHQTRTRHRWCSRSRECVVVDHSWRM CRVGSSLKLGLDSRSRLSSHSRDSSSSPFPLPLELWYTTILMLMVGWLKNPEIDDVDNSSRLLLGNSLNVQIWTLMIALGFNALSYPPVYTF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G23300			MATE efflux family protein (.1...		Lus10026324 [exp]	0	1
AT3G11840		PUB24	plant U-box 24 (.1)		Lus10008368 [exp]	8.1	0.9671
AT3G48410			alpha/beta-Hydrolases superfam...		Lus10014191 [exp]	19.4	0.9504
AT3G26770			NAD(P)-binding Rossmann-fold s...		Lus10021313 [exp]	21.1	0.9519
AT5G40010		ASD, AATP1	ATPase-in-Seed-Development, AA...		Lus10015349 [exp]	24.6	0.9168
AT1G67070		PMI2, DIN9	PHOSPHOMANNOSE ISOMERASE 2, DA...		Lus10015062 [exp]	25.1	0.9499
					Lus10005525 [exp]	29.7	0.9491
AT3G48310		CYP71A22	"cytochrome P450, family 71, s...		Lus10030530 [exp]	31.3	0.9503
AT1G47670			Transmembrane amino acid trans...		Lus10022641 [exp]	31.7	0.9499
AT1G80450			VQ motif-containing protein (....		Lus10026247 [exp]	39.5	0.9491
AT1G09155		ATPP2-B15	phloem protein 2-B15 (.1)		Lus10015208 [exp]	40.7	0.9331

Compare expression of checked genes

Lus10026324 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.