Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G11755 206 / 9e-66 LEW1 LEAF WILTING 1, Undecaprenyl pyrophosphate synthetase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042338 [exp] 287 / 2e-98 AT1G11755 162 / 6e-50 LEAF WILTING 1, Undecaprenyl pyrophosphate synthetase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G152800 [exp] 314 / 2e-108 AT1G11755 258 / 2e-86 LEAF WILTING 1, Undecaprenyl pyrophosphate synthetase family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026330 pacid=23156417 polypeptide=Lus10026330 locus=Lus10026330.g ID=Lus10026330.BGIv1.0 annot-version=v1.0 ATGGACTGCAAGCAAGAAGTTCGGCAAGTGTCGTCCAGTTGGATGCACCAGATTGGGAATCTAGGGCTCCGTGTATTGTGGGGATTGGTACACCTACTTC TCAGCATTGTCTATCTTGGAGTTGCAGCTGCTAAAGCTGCTGAAAGCTATCTAATCTCCAGTGGGTTGCTTACCCGTTACAGAGAGATTAACATCGGCAA ACTCAAGTACTTGGCCATTGTTATAGAGAGTGATGATGCTGTTCAGATTTCCAAGATTGTTCAGCTTGTAACGTGGCTCCAAGTTATGGGCGTCAAACAA TTGTGCCTCTATGATGCGTTAGGAGTTCTGAAGAAGTCTAAAGATAAAATTGTTAGAAAGTTGGATAATGCAGTTCTCTTGGAGGAACTTGATAAAAAGG AGTTGCAGGAAGTTCCAAAATGTATGACCCTTGAATTTGCTTCGATGTCTGATGGAAAGGAAGCGGTAGCCAAGGCCGCGAACTTGCTCTTTACGAAGTA CAGGAAAGTTGCAAACTTGGACCTGCAGGATGAGCAGATTTTCACTGAAGCAAACATCACAGAGGCATTAAGAGCTGTAGGTTGCATGGGGCCAGAACCT GACCTGCTTTTAGTTTATGCACCAGTAAGATGCCATCTTGGTTTCCCTGCTTGGAGAACTCGGTACACAGAGATAGAGCATATGGGATCATTGAAGTCCA TGAAGCATGGCTCGCTAATAAAAGCCATTTACAGGTTCACCATGGTGCGCCAAAACTACGGTAACATTCTTCGTAAACACTTCGACAATAGATCCTTATT CGTTTCGCCAGATCAACTTATTGATCAAACCCACCAAACCCTGTTGGATGCTATCATATAA
AA sequence Show only first row Show all	>Lus10026330 pacid=23156417 polypeptide=Lus10026330 locus=Lus10026330.g ID=Lus10026330.BGIv1.0 annot-version=v1.0 MDCKQEVRQVSSSWMHQIGNLGLRVLWGLVHLLLSIVYLGVAAAKAAESYLISSGLLTRYREINIGKLKYLAIVIESDDAVQISKIVQLVTWLQVMGVKQ LCLYDALGVLKKSKDKIVRKLDNAVLLEELDKKELQEVPKCMTLEFASMSDGKEAVAKAANLLFTKYRKVANLDLQDEQIFTEANITEALRAVGCMGPEP DLLLVYAPVRCHLGFPAWRTRYTEIEHMGSLKSMKHGSLIKAIYRFTMVRQNYGNILRKHFDNRSLFVSPDQLIDQTHQTLLDAII

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G11755		LEW1	LEAF WILTING 1, Undecaprenyl p...		Lus10026330 [exp]	0	1
AT1G13310			Endosomal targeting BRO1-like ...		Lus10041484 [exp]	1.0	0.8338
AT5G47810		PFK2	phosphofructokinase 2 (.1)		Lus10039993 [exp]	5.7	0.8112
AT3G56710		SIB1	sigma factor binding protein 1...		Lus10026165 [exp]	15.6	0.8120
AT1G11755		LEW1	LEAF WILTING 1, Undecaprenyl p...		Lus10042338 [exp]	17.3	0.7750
AT5G42290			transcription activator-relate...		Lus10034574 [exp]	18.4	0.7840
AT5G19440			NAD(P)-binding Rossmann-fold s...		Lus10008669 [exp]	25.6	0.8107
AT1G63740			Disease resistance protein (TI...		Lus10007834 [exp]	25.6	0.8093
AT1G54680			unknown protein		Lus10033821 [exp]	27.9	0.8012
AT1G11270			F-box and associated interacti...		Lus10025893 [exp]	28.7	0.7867
AT3G11620		BAS1	alpha/beta-Hydrolases superfam...		Lus10016976 [exp]	30.9	0.7549

Compare expression of checked genes

Lus10026330 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.