Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G73350 115 / 1e-31 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042294 [exp] 221 / 1e-72 AT1G73350 223 / 3e-74 unknown protein Lus10031897 [exp] 174 / 7e-54 AT1G73350 238 / 4e-80 unknown protein Lus10031324 [exp] 85 / 5e-21 ND 107 / 6e-31
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G066700 [exp] 148 / 6e-44 AT1G73350 192 / 7e-62 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026363 pacid=23156577 polypeptide=Lus10026363 locus=Lus10026363.g ID=Lus10026363.BGIv1.0 annot-version=v1.0 ATGGCGGGAAGGGAAGTGCGAGAATATACAAACCTCACCGATCCCAAAGGTATCTTCCGCTTCTTTCAGTTTGTAGCTCTCCAGCTTGCTCTTTCTTCCT GCCGATTCCAATGGGTTTTGTGTGCAGAGAGGAAACTCGGGAAGGGCAAAGATAAAGTCGACGACGAAGATGTCACTTTCCACCGCATGGTTGCTAAGGT TAGGCGAATCGCCTCTCCTGATTCTGTTTTCATTCTGTGGACGGTAAATGATTCTAAGTATAATCGGAATACAAGTGATGTTTATTATCAGAATTCAGGG AGTTGTGGTTGGGAAAGGATCCTGGCTTATCCCGTTGGATTGGTGATGCGGCAGATGCAAGAAGTTGCTGGAGAACGTGGAGGCTATCTTCACGGACGAG GCGCATTGGACAGTGATGACCTCCTTTACCTCAAGGAGCAGATGGAAGCTGAAGAGGATGCAGAACGACTCCTGCGCCGCACCGAGAAAAGGGCATTTGC TGCATTCAAAATATCCTTTTTCTGTGACACTTCACCAGCATCGGTTCCATTGCCACTTCGTGTAGAGCCCAAACCAAAGAGTGGCATAAGGCAGCAGGAC CTATTGAAAAAGGTGGTTGAAGTTAAACCAAAACGTCCCAGAATTTCGAATCGGGGAGATGGGGGCATCTCTACTGCTGTTTCAAGAAATCTCAGTTTGG AGAGTGAGAGCAAGCAGACTCCTGTTGTAGAAGAGCTTCCAGAGAAAAACCCTGTGAAAAGCTTGCTAGGGTTAGCATACGAAAGTTCTGATGATGAGGA CTGA
AA sequence Show only first row Show all	>Lus10026363 pacid=23156577 polypeptide=Lus10026363 locus=Lus10026363.g ID=Lus10026363.BGIv1.0 annot-version=v1.0 MAGREVREYTNLTDPKGIFRFFQFVALQLALSSCRFQWVLCAERKLGKGKDKVDDEDVTFHRMVAKVRRIASPDSVFILWTVNDSKYNRNTSDVYYQNSG SCGWERILAYPVGLVMRQMQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKISFFCDTSPASVPLPLRVEPKPKSGIRQQD LLKKVVEVKPKRPRISNRGDGGISTAVSRNLSLESESKQTPVVEELPEKNPVKSLLGLAYESSDDED

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G73350			unknown protein		Lus10026363 [exp]	0	1
AT3G14150			Aldolase-type TIM barrel famil...		Lus10013174 [exp]	2.4	0.8788
AT2G46910			Plastid-lipid associated prote...		Lus10010277 [exp]	3.0	0.8759
AT1G73350			unknown protein		Lus10042294 [exp]	3.2	0.8825
AT3G14130			Aldolase-type TIM barrel famil...		Lus10013173 [exp]	6.6	0.8676
					Lus10031452 [exp]	8.0	0.8633
AT5G05670			signal recognition particle bi...		Lus10013031 [exp]	8.5	0.8656
AT1G48175		TAD1, EMB2191	tRNA adenosine deaminase 1, em...		Lus10009163 [exp]	10.6	0.8640
AT5G55760		SRT1	sirtuin 1 (.1)		Lus10016619 [exp]	11.0	0.8590
AT3G07870			F-box and associated interacti...		Lus10029527 [exp]	12.6	0.8397
AT3G53180		NodGS	nodulin/glutamine synthase-lik...		Lus10023908 [exp]	13.0	0.8522

Compare expression of checked genes

Lus10026363 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.