Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042260 [exp] 89 / 6e-21 AT2G30140 410 / 3e-139 UDP-Glycosyltransferase superfamily protein (.1.2) Lus10042265 [exp] 72 / 9e-17 AT3G19615 60 / 1e-12 unknown protein
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026392 pacid=23156502 polypeptide=Lus10026392 locus=Lus10026392.g ID=Lus10026392.BGIv1.0 annot-version=v1.0 ATGGAACGCAGAGAAACTCCAGCGGGAACGGTACACAGCGTAGCTACAGGAATATTCCTCCGATTACCAATCCGGATGGCCCAACGGAGCTCAGTGTCGG AGATCATGGCAGTAATTCGCGGGTTGGAAATCCGGTCGAGGAGTTTGTCGACAGGGGTTTCCATTTCTGGCCGGCCACGCCCGTCATTTCCGGCGGACTT GTGGCCCCCCGCACCGGTCCAAGAAATCGGTAGTAGTGGGAGGCAGCTGGAAATGGGGGCGGGTCCGGCGGTGAGACGACCCACCATTCAAGGAGCCGCT GACGTCTCCTCCTCCTCCGCCGCCGACAAGGAGATGGTAGCTTCGAGTAGATCCCTCGGAGAAGGAGTTGGAGCTCCGGAGGTGGTGGTGGCGGTGGTGA GCAGGCTTGTTGTGGTGGTGGCTCTTCATTGCGTGGATCAGATATGGAATCAAACCGTCCATTCTTCTTAA
AA sequence Show only first row Show all	>Lus10026392 pacid=23156502 polypeptide=Lus10026392 locus=Lus10026392.g ID=Lus10026392.BGIv1.0 annot-version=v1.0 MERRETPAGTVHSVATGIFLRLPIRMAQRSSVSEIMAVIRGLEIRSRSLSTGVSISGRPRPSFPADLWPPAPVQEIGSSGRQLEMGAGPAVRRPTIQGAA DVSSSSAADKEMVASSRSLGEGVGAPEVVVAVVSRLVVVVALHCVDQIWNQTVHSS

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10026392 [exp]	0	1
AT4G19380			Long-chain fatty alcohol dehyd...		Lus10037257 [exp]	2.2	0.8328
AT1G03220			Eukaryotic aspartyl protease f...		Lus10041225 [exp]	4.2	0.7975
AT2G34930			disease resistance family prot...		Lus10024737 [exp]	4.9	0.7773
AT2G34930			disease resistance family prot...		Lus10039523 [exp]	6.6	0.7333
AT1G64060		RBOHAP108, ATRB...	ARABIDOPSIS THALIANA RESPIRATO...		Lus10028755 [exp]	7.3	0.7648
AT1G64610			Transducin/WD40 repeat-like su...		Lus10017312 [exp]	8.0	0.7995
					Lus10005948 [exp]	9.4	0.7648
AT1G21650		SECA2	Preprotein translocase SecA fa...		Lus10042747 [exp]	9.5	0.7058
AT3G47570			Leucine-rich repeat protein ki...		Lus10030847 [exp]	9.6	0.7904
AT1G14870		AtPCR2, PCR2	PLANT CADMIUM RESISTANCE 2 (.1...		Lus10041474 [exp]	11.0	0.6872

Compare expression of checked genes

Lus10026392 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.