Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G30140 238 / 3e-76 UDP-Glycosyltransferase superfamily protein (.1.2) AT2G30150 221 / 5e-70 UDP-Glycosyltransferase superfamily protein (.1) AT2G28080 164 / 1e-47 UDP-Glycosyltransferase superfamily protein (.1) AT1G05680 161 / 1e-46 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT2G31750 160 / 1e-46 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT1G05675 156 / 8e-45 UDP-Glycosyltransferase superfamily protein (.1) AT1G05560 154 / 4e-44 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) AT3G21560 155 / 5e-44 UGT84A2 UDP-Glycosyltransferase superfamily protein (.1) AT2G43820 152 / 3e-43 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT2G36970 152 / 3e-43 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042260 [exp] 439 / 4e-154 AT2G30140 410 / 3e-139 UDP-Glycosyltransferase superfamily protein (.1.2) Lus10026394 [exp] 250 / 5e-81 AT2G30140 425 / 3e-146 UDP-Glycosyltransferase superfamily protein (.1.2) Lus10042261 [exp] 244 / 2e-78 AT2G30140 472 / 1e-164 UDP-Glycosyltransferase superfamily protein (.1.2) Lus10042262 [exp] 233 / 8e-75 AT2G30150 375 / 2e-127 UDP-Glycosyltransferase superfamily protein (.1) Lus10016128 [exp] 175 / 1e-51 AT2G36970 558 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10016127 [exp] 166 / 6e-49 AT2G36970 426 / 2e-147 UDP-Glycosyltransferase superfamily protein (.1) Lus10021437 [exp] 162 / 1e-46 AT2G36970 530 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10010468 [exp] 160 / 4e-46 AT1G05675 368 / 7e-124 UDP-Glycosyltransferase superfamily protein (.1) Lus10016126 [exp] 160 / 5e-46 AT2G28080 551 / 0.0 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G077200 [exp] 295 / 2e-98 AT2G30140 478 / 6e-167 UDP-Glycosyltransferase superfamily protein (.1.2) Potri.001G282100 [exp] 283 / 9e-94 AT2G30140 475 / 5e-166 UDP-Glycosyltransferase superfamily protein (.1.2) Potri.001G281900 [exp] 268 / 4e-88 AT2G30140 478 / 6e-167 UDP-Glycosyltransferase superfamily protein (.1.2) Potri.001G281800 [exp] 257 / 1e-83 AT2G30150 467 / 5e-163 UDP-Glycosyltransferase superfamily protein (.1) Potri.009G077500 [exp] 246 / 2e-79 AT2G30140 450 / 5e-156 UDP-Glycosyltransferase superfamily protein (.1.2) Potri.009G077400 [exp] 229 / 7e-73 AT2G30150 464 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.004G179300 [exp] 167 / 4e-49 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.014G175000 [exp] 165 / 4e-48 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.009G008100 [exp] 165 / 6e-48 AT2G28080 622 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G101800 [exp] 164 / 6e-48 AT4G14090 369 / 3e-124 UDP-Glycosyltransferase superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10026393 pacid=23156554 polypeptide=Lus10026393 locus=Lus10026393.g ID=Lus10026393.BGIv1.0 annot-version=v1.0 ATGCATTTCGTGGGTACCGAAAGCTCAGTATCTCTTAGTGAACCCTTCGACGGTCTGAAATCAGAACTCAAGCTGACAATTTACCCAATCGGCCCAGCTA TTCCTTTCTATCAGCTCAATCACAACAGCACCAACACTTCTGAATCAGCTCCTGCTTATTTCAACTGGCTAGAATCTCAACCTAAGGGGTCAGTGTTGTA TATGTCATTAGGGAGCTTTCTATCCATATCGAGTAAGCAGATGGACGAACTTGCAGAAGGCCTTACAGCCAGCTCGGTTCGGTTCATTTGGGTGGCTAGA GGAGATCAAACCGAAAGGGCACGAGAACGGTGTGGTGAGAAAGGGATGGTGGTGCCGTGGTGCGACCAGATGAAGGTGCTGAACCATTGTTCCGTAGGAG GGTTCTTGACGCATTGCGGGTGGAATTCGACGCTGGAGGCCATCTACTGTGGTGTGCCGATGCTTACGTTTCCTCTGATATTCGATCAGGTTCCAAACAG TAGGCGGATCGTTGAGAAATGGAAGGTTGGGTGGAGGTTGAAGAGAGATGCGGTGGGGATAGAGGAGGATGAGTTGGTTAGGAGGGAGGAGATATGTGAT GTTGTGAAGAGGTTTATGGATGGAGAGGAGAGTGAGGTTGAGGAGATAAGGAAGAGAGGGAAAGAGTTGAGGGAGGTCTGCTGGGGAGCAATCGTAGAAG GTGGTTCTTCTGATAAGAACCTTGATGCGTTCATCATGGAAATCTCAGGTGCTTCCTAG
AA sequence Show only first row Show all	>Lus10026393 pacid=23156554 polypeptide=Lus10026393 locus=Lus10026393.g ID=Lus10026393.BGIv1.0 annot-version=v1.0 MHFVGTESSVSLSEPFDGLKSELKLTIYPIGPAIPFYQLNHNSTNTSESAPAYFNWLESQPKGSVLYMSLGSFLSISSKQMDELAEGLTASSVRFIWVAR GDQTERARERCGEKGMVVPWCDQMKVLNHCSVGGFLTHCGWNSTLEAIYCGVPMLTFPLIFDQVPNSRRIVEKWKVGWRLKRDAVGIEEDELVRREEICD VVKRFMDGEESEVEEIRKRGKELREVCWGAIVEGGSSDKNLDAFIMEISGAS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G30140			UDP-Glycosyltransferase superf...		Lus10026393 [exp]	0	1
AT3G13840	GRAS		GRAS family transcription fact...		Lus10000531 [exp]	7.7	0.8122
AT5G55060			unknown protein		Lus10032631 [exp]	14.9	0.8343
AT1G49710		ATFUT12, FUCTB,...	fucosyltransferase 12 (.1)		Lus10019855 [exp]	18.9	0.8252
AT3G01090		AKIN10, SnRK1.1	SNF1-RELATED PROTEIN KINASE 1....		Lus10001290 [exp]	28.6	0.7591
AT5G08020		ATRPA70B	ARABIDOPSIS THALIANA RPA70-KDA...		Lus10001304 [exp]	33.7	0.8102
AT2G03270			DNA-binding protein, putative ...		Lus10026309 [exp]	39.7	0.8256
AT3G28410			F-box/RNI-like superfamily pro...		Lus10020748 [exp]	56.9	0.7825
AT3G21690			MATE efflux family protein (.1...		Lus10027169 [exp]	81.1	0.8050
AT1G71980			Protease-associated (PA) RING/...		Lus10014823 [exp]	104.3	0.7975
AT3G08840			D-alanine--D-alanine ligase fa...		Lus10001259 [exp]	116.8	0.7905

Compare expression of checked genes

Lus10026393 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.