Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020089 [exp] 69 / 4e-14 AT1G61290 467 / 2e-166 syntaxin of plants 124 (.1) Lus10004991 [exp] 39 / 0.0006 ND /
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026426 pacid=23176408 polypeptide=Lus10026426 locus=Lus10026426.g ID=Lus10026426.BGIv1.0 annot-version=v1.0 ATGAGCTCAGGTGAGGTTTCAAGGTCAAGTCCACACATTCGTACCAACCCCATCATCGCACCAAGGTCAAGTCCAAGGTACTGCTATCACACCAAGGTCA AGTCCAAGGTCCATACTTGCCACATCCCGAATCAGGTTCACTCTGCTCCTGCAATAACTTTCAAACACCCTGGTGGGTGCTTAGGGTCTAACCTACTGCA ACGAAAAGAATTTACCCCCCTTAAACCACCCACCTCATTGGTGAGCCGACATCTCAGAAATATCTCTGAGCTGATTCCTCTTGCTGCCACGAAACCACAG CCTCAGATGGTGTGTCGTTCTGACCTCAAACGACCGAGTTATGCTCCGTTTACTTCTTTGCAACTTGCTGAAACTTCCAGGGGTGATTCTGTCATTTGGA CGCCTGGCTGGACAAATGTCCAGTTCATTCCTCAGACATCTGATCCTTACAGTTCCATCACTAGAAAAGTGGAGAATTAA
AA sequence Show only first row Show all	>Lus10026426 pacid=23176408 polypeptide=Lus10026426 locus=Lus10026426.g ID=Lus10026426.BGIv1.0 annot-version=v1.0 MSSGEVSRSSPHIRTNPIIAPRSSPRYCYHTKVKSKVHTCHIPNQVHSAPAITFKHPGGCLGSNLLQRKEFTPLKPPTSLVSRHLRNISELIPLAATKPQ PQMVCRSDLKRPSYAPFTSLQLAETSRGDSVIWTPGWTNVQFIPQTSDPYSSITRKVEN

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10026426 [exp]	0	1
AT5G22460			alpha/beta-Hydrolases superfam...		Lus10004882 [exp]	4.1	0.9602
AT1G11040			HSP40/DnaJ peptide-binding pro...		Lus10020822 [exp]	5.7	0.8035
AT1G35670		CPK11, ATCDPK2,...	calcium-dependent protein kina...		Lus10017911 [exp]	5.8	0.9602
AT1G19250		FMO1	flavin-dependent monooxygenase...		Lus10020001 [exp]	6.3	0.8907
AT4G25650		TIC55-IV, PTC52...	TRANSLOCON AT THE INNER ENVELO...		Lus10025414 [exp]	6.8	0.8731
AT3G06920			Tetratricopeptide repeat (TPR)...		Lus10038657 [exp]	7.1	0.9602
AT5G24230			Lipase class 3-related protein...		Lus10018097 [exp]	8.1	0.8747
AT2G37360		ABCG2	ATP-binding cassette G2, ABC-2...		Lus10039859 [exp]	8.2	0.9602
AT5G58850	MYB	ATMYB119	myb domain protein 119 (.1)		Lus10040684 [exp]	9.2	0.9602
AT4G20060		EMB1895	EMBRYO DEFECTIVE 1895, ARM rep...		Lus10038371 [exp]	10.1	0.9602

Compare expression of checked genes

Lus10026426 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.