Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006817 [exp] 69 / 2e-14 AT4G39400 1356 / 0.0 DWARF 2, CABBAGE 2, BRASSINOSTEROID INSENSITIVE 1, BR INSENSITIVE 1, Leucine-rich receptor-like protein kinase family protein (.1) Lus10005784 [exp] 67 / 9e-14 AT4G39400 1361 / 0.0 DWARF 2, CABBAGE 2, BRASSINOSTEROID INSENSITIVE 1, BR INSENSITIVE 1, Leucine-rich receptor-like protein kinase family protein (.1)
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026470 pacid=23176451 polypeptide=Lus10026470 locus=Lus10026470.g ID=Lus10026470.BGIv1.0 annot-version=v1.0 ATGTGGTTAATTCCTCTAAACTGGACGTTGAATGCATATGTGCCGCGTAGAAACTGGGAACTCGTCGGTGACTTGTTGACGGAAAGGTCAAAGGTATCCA AGGACGATGAACAAGAAGTAAACCCGAGAGAAATCGAACCAGTGAGATTGTTTGAAGATAGATCGAGATTCGCACAAGATCTGGAGATAAATCGTCGACG AGACTCGCCGTGGAATTGGTTGCCGAATAGCAACAAGAACTTCAACTTCTTCTTCCACAGATGGTGGGGTTTCACCGGAAACGTTAGAAAACGCGAGACT CTTGCATCATTGGAGAAGAGTGCCAAGATCGCCGAAGAATTTGTTGTGGAAGACGTCGAGGTGGGAGAGAGATGGAAGAGGAAGAGAGGATACACATGA
AA sequence Show only first row Show all	>Lus10026470 pacid=23176451 polypeptide=Lus10026470 locus=Lus10026470.g ID=Lus10026470.BGIv1.0 annot-version=v1.0 MWLIPLNWTLNAYVPRRNWELVGDLLTERSKVSKDDEQEVNPREIEPVRLFEDRSRFAQDLEINRRRDSPWNWLPNSNKNFNFFFHRWWGFTGNVRKRET LASLEKSAKIAEEFVVEDVEVGERWKRKRGYT

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10026470 [exp]	0	1
AT2G16190			unknown protein		Lus10040480 [exp]	3.5	0.6979
AT3G57170			N-acetylglucosaminyl transfera...		Lus10003248 [exp]	6.8	0.7420
AT1G32400		TOM2A	tobamovirus multiplication 2A ...		Lus10040108 [exp]	11.0	0.7281
AT1G77260			S-adenosyl-L-methionine-depend...		Lus10042762 [exp]	13.0	0.6794
AT1G15520		ATABCG40, ABCG4...	Arabidopsis thaliana ATP-bindi...		Lus10022663 [exp]	16.0	0.6955
AT5G36930			Disease resistance protein (TI...		Lus10042714 [exp]	16.2	0.6781
AT3G43790		ZIFL2	zinc induced facilitator-like ...		Lus10041286 [exp]	31.1	0.6122
AT1G68800	TCP	TCP12, BRC2, TC...	BRANCHED 2, TCP domain protein...		Lus10032465 [exp]	33.0	0.6610
					Lus10013898 [exp]	38.5	0.6453
AT2G26150	HSF	ATHSFA2	heat shock transcription facto...		Lus10027627 [exp]	43.3	0.6388

Compare expression of checked genes

Lus10026470 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.