Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G43190 159 / 2e-47 ribonuclease P family protein (.1.2.3.4)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019913 [exp] 424 / 4e-150 AT2G43190 221 / 9e-70 ribonuclease P family protein (.1.2.3.4)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G033900 [exp] 249 / 1e-82 AT2G43190 252 / 6e-83 ribonuclease P family protein (.1.2.3.4)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026483 pacid=23164237 polypeptide=Lus10026483 locus=Lus10026483.g ID=Lus10026483.BGIv1.0 annot-version=v1.0 ATGGCGGCAGAGGATGGAAGGAAACGAGCTATGGACGCATTAGAGAGAAGATTCGTGGTTGCTAAAGCTGAGGTGCTCCAACAACAAAAGAGAAGCGAAA AGAGGCCTAGGGTAGAAAGTAAGAAAAGAGAATGGAAAGCGCCGGAATCGTCTTCTTCCGGTGCTGCATCGATGTCTACATCCGTGGATGCGCCGACCAG GAAAGGGAATTTCTTCTCCTCAAGCTACTTCTCAGCTCAAGATTTGGAAGGAAGTGGATTGACATATTCAGAAATCTCTCAACCTGTACATGAAAGTCTA TTAACAACCAACAGTGAGGTTCAGACTAAGAGAGGGAGTACGGTGGACAAGATTCTACATGATATTTTTCAGCATGGGGATATTTCTCAGAAGTATCTGC AGGGTTCCAGAACGAAAAAACTCGAGAATTGGATATTGCTTGATAATTATGTGCCGGTGCGTGGCAAATCTAAGACCCCTCGCACAGAGGCCTTGCAATT GCAGGCTAAGAGGTCTAAGAAGCATATGTCCATGAAGCAACATAAAAAGTGTGGATCACTAGAATTGGCTAAACATCTCCGGAAATTTGATGTGCTCAGG CCAATGCATGAGATGTGGAAAGACTACGCGTCAAAGCTTCTAAAAAACACTGGGAGAGATCAGTTACCTCAATGTCTTCTTGGCGCAGATCTTCACGGTG CCATTATTATAGTTGCCGATTGTAAGATATCATCATTAACCCGAGTTAGTGGGATCATGATCCGTGAAACTGCTTGGGATAATTACACGAGATGA
AA sequence Show only first row Show all	>Lus10026483 pacid=23164237 polypeptide=Lus10026483 locus=Lus10026483.g ID=Lus10026483.BGIv1.0 annot-version=v1.0 MAAEDGRKRAMDALERRFVVAKAEVLQQQKRSEKRPRVESKKREWKAPESSSSGAASMSTSVDAPTRKGNFFSSSYFSAQDLEGSGLTYSEISQPVHESL LTTNSEVQTKRGSTVDKILHDIFQHGDISQKYLQGSRTKKLENWILLDNYVPVRGKSKTPRTEALQLQAKRSKKHMSMKQHKKCGSLELAKHLRKFDVLR PMHEMWKDYASKLLKNTGRDQLPQCLLGADLHGAIIIVADCKISSLTRVSGIMIRETAWDNYTR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G43190			ribonuclease P family protein ...		Lus10026483 [exp]	0	1
AT4G10920		KELP	transcriptional coactivator p1...		Lus10023061 [exp]	2.0	0.9278
AT5G17060		ATARFB1B	ADP-ribosylation factor B1B (....		Lus10009571 [exp]	2.0	0.9083
AT3G54850		ATPUB14	plant U-box 14 (.1)		Lus10033249 [exp]	6.0	0.8466
AT1G76200			unknown protein		Lus10012279 [exp]	7.0	0.8744
AT2G04520			Nucleic acid-binding, OB-fold-...		Lus10000920 [exp]	7.7	0.8782
AT5G14930		GENE101, SAG101	senescence-associated gene 101...		Lus10011697 [exp]	8.1	0.8706
AT5G07840		PIA1	phytochrome interacting ankyri...		Lus10018958 [exp]	9.5	0.8766
AT3G61113			Ubiquitin related modifier 1 (...		Lus10041378 [exp]	10.7	0.8956
AT5G09830			BolA-like family protein (.1)		Lus10020861 [exp]	10.8	0.8725
AT2G02570			nucleic acid binding;RNA bindi...		Lus10024458 [exp]	11.0	0.8708

Compare expression of checked genes

Lus10026483 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.