Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G44370 692 / 0 PHT4;6 phosphate transporter 4;6 (.1) AT4G00370 271 / 2e-85 PHT4;4, ANTR2 anion transporter 2, Major facilitator superfamily protein (.1) AT2G29650 268 / 2e-84 PHT4;1, ANTR1 anion transporter 1, phosphate transporter 4;1 (.1.2.3) AT5G20380 211 / 7e-63 PHT4;5 phosphate transporter 4;5 (.1) AT2G38060 208 / 9e-62 PHT4;2 phosphate transporter 4;2 (.1) AT3G46980 201 / 1e-58 PHT4;3 phosphate transporter 4;3 (.1.2.3)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013836 [exp] 867 / 0 AT5G44370 714 / 0.0 phosphate transporter 4;6 (.1) Lus10018218 [exp] 266 / 1e-83 AT2G29650 761 / 0.0 anion transporter 1, phosphate transporter 4;1 (.1.2.3) Lus10040686 [exp] 267 / 4e-81 AT2G29650 760 / 0.0 anion transporter 1, phosphate transporter 4;1 (.1.2.3) Lus10036366 [exp] 255 / 1e-78 AT4G00370 812 / 0.0 anion transporter 2, Major facilitator superfamily protein (.1) Lus10035532 [exp] 209 / 6e-62 AT2G38060 669 / 0.0 phosphate transporter 4;2 (.1) Lus10014769 [exp] 204 / 2e-57 AT4G00370 662 / 0.0 anion transporter 2, Major facilitator superfamily protein (.1) Lus10027761 [exp] 187 / 7e-55 AT2G38060 619 / 0.0 phosphate transporter 4;2 (.1) Lus10040703 [exp] 187 / 1e-53 AT3G46980 673 / 0.0 phosphate transporter 4;3 (.1.2.3) Lus10018203 [exp] 192 / 2e-53 AT3G46980 689 / 0.0 phosphate transporter 4;3 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G168200 [exp] 736 / 0 AT5G44370 676 / 0.0 phosphate transporter 4;6 (.1) Potri.014G085700 [exp] 276 / 5e-87 AT4G00370 841 / 0.0 anion transporter 2, Major facilitator superfamily protein (.1) Potri.009G043800 [exp] 262 / 3e-82 AT2G29650 778 / 0.0 anion transporter 1, phosphate transporter 4;1 (.1.2.3) Potri.001G249800 [exp] 257 / 3e-80 AT2G29650 773 / 0.0 anion transporter 1, phosphate transporter 4;1 (.1.2.3) Potri.016G111000 [exp] 209 / 9e-62 AT2G38060 687 / 0.0 phosphate transporter 4;2 (.1) Potri.018G121600 [exp] 208 / 2e-61 AT5G20380 654 / 0.0 phosphate transporter 4;5 (.1) Potri.006G062300 [exp] 207 / 7e-61 AT5G20380 636 / 0.0 phosphate transporter 4;5 (.1) Potri.001G248200 [exp] 195 / 1e-56 AT3G46980 675 / 0.0 phosphate transporter 4;3 (.1.2.3) Potri.002G160650 [exp] 75 / 8e-16 AT4G00370 190 / 3e-58 anion transporter 2, Major facilitator superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10026551 pacid=23164414 polypeptide=Lus10026551 locus=Lus10026551.g ID=Lus10026551.BGIv1.0 annot-version=v1.0 ATGAAGGGGATCATCCTTCCAAAGCGGTACTTGATTGTCATCTTAACATTTATTAGCACTTGCGTCTGCTATATAGAACGAGTGGGTTTCTCTATAGCCT ACACCGTTGCTGCTGATGCAGCCGGGGTGAGCGAATCGAGCAAAGGAGTGATTCTATCAACATTCTACTATGGTTACGCTTGTTCCCAGGTGCCCGGAGG ATGGGCGGCTCAGAGGATCGGAGGAAGGAAAGTTCTCCTTCTCTCATTTGTTTTGTGGTCGTCTACTTGTTTTTTGGTCCCACTCGATCCAAACCGCGTT ACAGTCATGGTGCTTGCCCGCCTGCTTGTTGGTGTCGCACAAGGTTTTATCTTTCCCTCCATACACACTGTCCTGGCTCAGTGGGTTCCTCCCCATGAGA GGTCCAGATCAGTTTCTCTTACGACCTCCGGAATGTACTTAGGTGCAGCTATGGGAATGCTCATCCTCCCAAGTTTAGTGAAATTCAAAGGCCCGCAATC TGTATTCGTTGCTGAAGCTGTATTAGGTATTCTCTGGTGTCTACTGTGGTTCAAGTATGCAAGTGATCCTCCTCGGTCGGAGCATCCAAAAGCCACTGCT GCTGGGTTTGGAGAGTCTTTGCTGCCACTGAAAGCCAATCAGAAGGTAAAAGTCGAGAACGGAGTAAGTAGTTCACGAACCGCACAGATTCCTTGGAAAA AGATCTTACTCAGCTTACCGGTTTGGGCAATTGTGGTGAACAATTTCACTTTCCATTATGCATTGTATGTGCTAATGAATTGGCTACCGACGTACTTCGA ACAAGGCTTGCAGCTTAGTCTTCAAGAAATGGGTTCCTCTAAGATGATGCCATATCTCAACATGTTCCTTTTCTCCAACATTGGTGGAGTGGTTGCTGAC CATCTGATCACTAAAAGGATAATGTCTGTGACTAAAACGCGGAAGGTTTTGAACACGATTGGGTTTATAGTTGCGGCTTTTGCATTGATGGCACTTCCTA TGTTCAGAACTTCTGATGGGGCTGTGTTCTGTTCTTCTATAGCTCTTGGCTTTTTAGCATTGGGAAGGGCCGGATTCGCGGTGAATCACATGGATATCGC TCCGAGATATGCAGGAATAGTTATGGGAGTTTCTAATACTGCCGGCACATTGGCTGGGATTGTTGGGGTTGACTTGACTGGCAAGCTTCTTGAAGCTGCA AAATTGGCTTATTCTGATCTTTCGAGTCCCGAAAGTTGGAGAGTAGTGTTCTGCATACCGGGGCTTCTCTGCATCTTCAGTTCTGTAGTGTTCTTACTCT TCTCCAGCGGGGAGAGGATTTTTGACTGA
AA sequence Show only first row Show all	>Lus10026551 pacid=23164414 polypeptide=Lus10026551 locus=Lus10026551.g ID=Lus10026551.BGIv1.0 annot-version=v1.0 MKGIILPKRYLIVILTFISTCVCYIERVGFSIAYTVAADAAGVSESSKGVILSTFYYGYACSQVPGGWAAQRIGGRKVLLLSFVLWSSTCFLVPLDPNRV TVMVLARLLVGVAQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLILPSLVKFKGPQSVFVAEAVLGILWCLLWFKYASDPPRSEHPKATA AGFGESLLPLKANQKVKVENGVSSSRTAQIPWKKILLSLPVWAIVVNNFTFHYALYVLMNWLPTYFEQGLQLSLQEMGSSKMMPYLNMFLFSNIGGVVAD HLITKRIMSVTKTRKVLNTIGFIVAAFALMALPMFRTSDGAVFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGVSNTAGTLAGIVGVDLTGKLLEAA KLAYSDLSSPESWRVVFCIPGLLCIFSSVVFLLFSSGERIFD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G44370		PHT4;6	phosphate transporter 4;6 (.1)		Lus10026551 [exp]	0	1
AT4G20720			dentin sialophosphoprotein-rel...		Lus10031541 [exp]	1.0	0.9080
AT4G21150		HAP6	HAPLESS 6, ribophorin II (RPN2...		Lus10024911 [exp]	2.4	0.9004
AT1G18485			Pentatricopeptide repeat (PPR)...		Lus10036071 [exp]	3.2	0.8743
AT3G16060			ATP binding microtubule motor ...		Lus10037546 [exp]	3.9	0.8915
AT3G01810			unknown protein		Lus10041590 [exp]	4.0	0.8825
AT3G19870			unknown protein		Lus10030556 [exp]	5.2	0.8987
AT4G35335			Nucleotide-sugar transporter f...		Lus10013845 [exp]	5.7	0.8720
AT5G08160		ATPK3	serine/threonine protein kinas...		Lus10034642 [exp]	6.3	0.8964
AT3G62660		GATL7	galacturonosyltransferase-like...		Lus10000262 [exp]	7.5	0.8638
AT1G01300			Eukaryotic aspartyl protease f...		Lus10030246 [exp]	8.7	0.8632

Compare expression of checked genes

Lus10026551 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.