Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026629 [exp] 47 / 1e-06 AT4G23180 540 / 0.0 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (.1)
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026628 pacid=23164269 polypeptide=Lus10026628 locus=Lus10026628.g ID=Lus10026628.BGIv1.0 annot-version=v1.0 ATGGCAGCAGAAAACGAAGCCGCCGCAGATTCTTTTGGAGATTGGGAGCAAGTTCATCTCACCACTAGTACCACCACAAACGAAACCTCTGTTTCCGACG CCGCCACTCCGATCAACGGCGACGAAATCCTTCCTCCGCCACCGCTGGATGAGGATGGCGCCGGAGGAGGCGAGACTAGAAGCGCGAGGGTCCGACTGCG GATGGAGGTTCTGAAGTCAGGAATGATAGGGGTAGTTCAGAGGGTGCTGCGGCGGTGCAGCGGAGGCGGGGCACTGTGGTCGTGCCTGGTGGTGGCAGCG GCGGTGCTTATGTACGTTAAGCTTGTGAAGTGGCGGAGGTGGGTGCGGGAAGAGACGGCCAGTCGTTTTGCACTCCTTATCAAGGAGAAAGATGAGGGAT TCGGGGATGGTTATGGTATACCCATTACCCATCTGACTCGATCGATCAAGGGTGTAGCCAATGCCGGAGGATACCACGGCGACCCCAACCGCTAA
AA sequence Show only first row Show all	>Lus10026628 pacid=23164269 polypeptide=Lus10026628 locus=Lus10026628.g ID=Lus10026628.BGIv1.0 annot-version=v1.0 MAAENEAAADSFGDWEQVHLTTSTTTNETSVSDAATPINGDEILPPPPLDEDGAGGGETRSARVRLRMEVLKSGMIGVVQRVLRRCSGGGALWSCLVVAA AVLMYVKLVKWRRWVREETASRFALLIKEKDEGFGDGYGIPITHLTRSIKGVANAGGYHGDPNR

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10026628 [exp]	0	1
AT3G52740			unknown protein		Lus10014197 [exp]	1.0	0.9564
AT4G25570		ACYB-2	Cytochrome b561/ferric reducta...		Lus10039216 [exp]	2.8	0.9327
AT1G75900		EXL3	GDSL-like Lipase/Acylhydrolase...		Lus10028425 [exp]	3.9	0.9211
AT1G11600		CYP77B1	"cytochrome P450, family 77, s...		Lus10018350 [exp]	3.9	0.9279
AT5G10770			Eukaryotic aspartyl protease f...		Lus10038732 [exp]	7.2	0.9214
AT5G65730		XTH6, XTR10	xyloglucan endotransglucosylas...		Lus10039643 [exp]	7.7	0.9149
AT1G01300			Eukaryotic aspartyl protease f...		Lus10039126 [exp]	8.5	0.9114
AT4G01935			unknown protein		Lus10010062 [exp]	9.9	0.9140
AT2G41040			S-adenosyl-L-methionine-depend...		Lus10008815 [exp]	11.4	0.9096
AT5G57800		CER3, FLP1, YRE...	FACELESS POLLEN 1, ECERIFERUM ...		Lus10008895 [exp]	13.3	0.9116

Compare expression of checked genes

Lus10026628 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.