Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G69930 55 / 4e-11 ATGSTU11 glutathione S-transferase TAU 11 (.1) AT1G27130 51 / 9e-10 GST12, ATGSTU13 GLUTATHIONE S-TRANSFERASE 12, glutathione S-transferase tau 13 (.1) AT1G10370 49 / 6e-09 GST30B, ATGSTU17, ERD9 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) AT1G69920 48 / 2e-08 ATGSTU12 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, glutathione S-transferase TAU 12 (.1) AT1G10360 47 / 5e-08 GST29, ATGSTU18 GLUTATHIONE S-TRANSFERASE 29, glutathione S-transferase TAU 18 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006525 [exp] 97 / 8e-29 AT1G69930 57 / 1e-11 glutathione S-transferase TAU 11 (.1) Lus10036688 [exp] 100 / 2e-28 AT1G10370 281 / 1e-96 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10009746 [exp] 94 / 2e-27 AT1G10370 96 / 1e-25 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10029518 [exp] 91 / 7e-26 AT1G69930 96 / 3e-25 glutathione S-transferase TAU 11 (.1) Lus10037234 [exp] 92 / 6e-25 AT1G10370 285 / 2e-98 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10030805 [exp] 68 / 9e-16 AT1G10370 308 / 4e-107 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10013282 [exp] 67 / 1e-15 AT1G10370 229 / 2e-76 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10030806 [exp] 65 / 1e-14 AT1G10370 290 / 4e-100 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10001640 [exp] 37 / 0.0003 AT2G29420 206 / 6e-67 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G035500 [exp] 63 / 5e-14 AT1G10370 301 / 2e-104 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Potri.010G032800 [exp] 62 / 1e-13 AT1G10370 303 / 3e-105 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026722 pacid=23176563 polypeptide=Lus10026722 locus=Lus10026722.g ID=Lus10026722.BGIv1.0 annot-version=v1.0 ATGATCGGGACTAAGGTGATTAATGAGGAGTCAACTCCTGGTCTGGCTAAATGGGTAGAGAAATTCTCAGCTCATGCTGCTATGAAAGATGTGATGCCTG AGACTGAGAAACTAGTCGAGTTTGCAAAGTTTATGGCTACCAAGAGGAAAGAGTAA
AA sequence Show only first row Show all	>Lus10026722 pacid=23176563 polypeptide=Lus10026722 locus=Lus10026722.g ID=Lus10026722.BGIv1.0 annot-version=v1.0 MIGTKVINEESTPGLAKWVEKFSAHAAMKDVMPETEKLVEFAKFMATKRKE

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G69930		ATGSTU11	glutathione S-transferase TAU ...		Lus10026722 [exp]	0	1
AT4G26590		ATOPT5	ARABIDOPSIS THALIANA OLIGOPEPT...		Lus10032585 [exp]	3.2	0.8928
AT3G44735		PSK1, ATPSK3	PHYTOSULFOKINE 3 PRECURSOR (.1...		Lus10035572 [exp]	3.7	0.8945
AT3G45790			Protein kinase superfamily pro...		Lus10013791 [exp]	6.5	0.8727
AT3G58720			RING/U-box superfamily protein...		Lus10040151 [exp]	6.7	0.8779
AT5G23070			Thymidine kinase (.1)		Lus10016925 [exp]	7.8	0.7854
AT5G13170		SAG29, SWEET15,...	senescence-associated gene 29 ...		Lus10003143 [exp]	9.3	0.8818
AT3G27785	MYB	PGA37, ATMYB118	PLANT GROWTH ACTIVATOR 37, myb...		Lus10013084 [exp]	9.5	0.8308
AT3G17220		ATPMEI2	pectin methylesterase inhibito...		Lus10017347 [exp]	11.8	0.8805
AT3G18990	B3	REM39, VRN1	REDUCED VERNALIZATION RESPONSE...		Lus10008529 [exp]	12.4	0.8492
AT4G12300		CYP706A4	"cytochrome P450, family 706, ...		Lus10024581 [exp]	15.0	0.8554

Compare expression of checked genes

Lus10026722 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.