Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10001462 [exp] 60 / 8e-12 AT3G05700 124 / 5e-35 Drought-responsive family protein (.1)
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026794 pacid=23176589 polypeptide=Lus10026794 locus=Lus10026794.g ID=Lus10026794.BGIv1.0 annot-version=v1.0 ATGATGAAAAGAGTACAGTCAACTTCTTCCTATACAATTGACTTCCAAGGGAGGCTCCCGAGTTGGAATTTCAGGTATGCCATTGTCCTGAAGGATGATG ATGATGACGATGATGATAATGAGTTATCTCGATATTGTCGGTCTTCTGCTATTGTTTCCCGTACTGATGCGTTCCTATCATTCATACAAACGATGCCCAC TCTCGCCAAAGCAGAAGATGCTCAACTCTACCCAAATAGATGCTGGAAAGGGAAAAGCCAAGAAGATAAGCAATGTGACAGTGTTGGTTCCCCATTCTCG AGTCCCGATTCCCGGCAAGGAAGTGGCGTCCTTGCCGGGAGCAAATAA
AA sequence Show only first row Show all	>Lus10026794 pacid=23176589 polypeptide=Lus10026794 locus=Lus10026794.g ID=Lus10026794.BGIv1.0 annot-version=v1.0 MMKRVQSTSSYTIDFQGRLPSWNFRYAIVLKDDDDDDDDNELSRYCRSSAIVSRTDAFLSFIQTMPTLAKAEDAQLYPNRCWKGKSQEDKQCDSVGSPFS SPDSRQGSGVLAGSK

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10026794 [exp]	0	1
AT5G44640		BGLU13	beta glucosidase 13 (.1)		Lus10024065 [exp]	1.4	0.8799
AT4G18160		KCO6, ATTPK3, A...	Ca2+ activated outward rectify...		Lus10004538 [exp]	4.0	0.8030
					Lus10007779 [exp]	4.9	0.8087
					Lus10002975 [exp]	10.6	0.7772
AT1G26140			unknown protein		Lus10034406 [exp]	11.2	0.7554
AT5G03980			SGNH hydrolase-type esterase s...		Lus10009325 [exp]	12.1	0.8275
AT5G46090			Protein of unknown function (D...		Lus10013933 [exp]	12.3	0.8285
AT3G60160		ATMRP9, ABCC9	ATP-binding cassette C9, multi...		Lus10022808 [exp]	16.7	0.8154
AT3G57270		BG1	"beta-1,3-glucanase 1", beta-1...		Lus10035423 [exp]	17.1	0.7225
AT3G25900		HMT-1, ATHMT-1	Homocysteine S-methyltransfera...		Lus10034320 [exp]	18.4	0.6929

Compare expression of checked genes

Lus10026794 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.