Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026844 pacid=23142828 polypeptide=Lus10026844 locus=Lus10026844.g ID=Lus10026844.BGIv1.0 annot-version=v1.0 ATGTGCACAAGGAGCTGGTTGCAAAATGAGTTGCTTCAAGATGCAGCTGTTGCGGAAGGTTGCTTCTCTTCTCCACTAATTGAAGACGATCTTATCCAGA CTGAAGATGAAATTGGAGAAGTTCGGAGCTCCGAGCAACTCCGAAATCCGATGATGGGCGGGGATGGTATCGAATTTAAACCCGATGGCTGTCATCGGGC GGGGAATCCCCGAATCCGGCACTTCAACGGGTGGGTACCGGATGCATATAAATCCGGCCCCGATCCGCCCGAATGCCAAGCCTAA
AA sequence Show only first row Show all	>Lus10026844 pacid=23142828 polypeptide=Lus10026844 locus=Lus10026844.g ID=Lus10026844.BGIv1.0 annot-version=v1.0 MCTRSWLQNELLQDAAVAEGCFSSPLIEDDLIQTEDEIGEVRSSEQLRNPMMGGDGIEFKPDGCHRAGNPRIRHFNGWVPDAYKSGPDPPECQA

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10026844 [exp]	0	1
AT1G26480		GF14IOTA, GRF12	general regulatory factor 12 (...		Lus10036896 [exp]	2.4	1.0000
					Lus10027530 [exp]	8.4	1.0000
AT1G35720		ATOXY5, ANNAT1	annexin 1 (.1)		Lus10036470 [exp]	8.8	1.0000
AT1G69530		ATHEXPALPHA1.2,...	EXPANSIN 1, expansin A1 (.1.2....		Lus10003438 [exp]	8.8	1.0000
					Lus10006296 [exp]	10.0	1.0000
AT5G49900			Beta-glucosidase, GBA2 type fa...		Lus10023340 [exp]	11.4	1.0000
AT3G52970		CYP76G1	"cytochrome P450, family 76, s...		Lus10029930 [exp]	12.0	1.0000
					Lus10026042 [exp]	13.0	1.0000
AT2G06040			unknown protein		Lus10017169 [exp]	14.3	0.9078
					Lus10012669 [exp]	15.9	1.0000

Compare expression of checked genes

Lus10026844 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.