Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G65270 309 / 3e-105 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020224 [exp] 413 / 3e-146 AT1G65270 358 / 1e-124 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.019G055100 [exp] 319 / 2e-109 AT1G65270 356 / 4e-124 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026847 pacid=23142846 polypeptide=Lus10026847 locus=Lus10026847.g ID=Lus10026847.BGIv1.0 annot-version=v1.0 ATGACGACGAGGAACGCACTGTTTCTATTCTTGTTTACTCTCTTCCACCTACTCTCTCTCTTCGTTCCTTCCCATTCCGGTTTTCACTCCGACGAGCTTC TCGTTGACGATGACGAGTTAGTCCTCGATTCCGTCCAGCCTGTACCTCAGTCTTCGATTCCTAAACCAGATCACACTTCCACTCCCTCTCCAACTCCTCG CAGGAAGTCCTCTGATTCCGATTCCGACTCCAAGATCCAATTCACCCTTGAACATGCCTTTGGTGAGTCCGATTTTGTTCCCGCCGGCACCTTCTCCGCT CGCCTCAAAACATCTGCTCATGGCAGCCAGACGCTCACAAAGCTGAGATTCTCGAGGAATGCTTTGACGGATGCTGAGAAAGAGAACTTTAAGAACCTGC TGGAGGTTGACGATTTCTACAAGATAAGGCTGCCTTCTAATGTCTTAAGTCCTCCTGGAAAGGATTTTGTTGTCTCCTCTGTGAAAGCAAGATGTCTTCC GAGAGAGACTTTGGATGAGCACTTTGTGATACAAACGGAAGGTGTGAACATCTTGGCTGTTAACTATGGTGCCCCTGGAGCATGTTCCTATCCTCGACAA ATGAAACTTCCATCGAAGTGGTTATTCAACTCATATACAGTTCTGAAGAATACTGAGCAGGCACCAAGGACGCCAGTTTTCATTCAGGATGTGTTGGGCG GGGAAGAGGGGGAAGGCGAAGCGGCACAACTTCCAGAAAGGTCCTGGTGGGCTAAATATTGGATGTACTTGATACCTCTGGGGCTGATAGTGATGAATGC CATGACCCAAGCAATGAATATGCCCGAGGAACAAGCTGCCGGGCAGGCCGGTGGATCACAGGCTGCACCCGCAGGAGCTGTGGCTCGCGGTCCCAGTTCG GCTGCTAGGAGAAGATGA
AA sequence Show only first row Show all	>Lus10026847 pacid=23142846 polypeptide=Lus10026847 locus=Lus10026847.g ID=Lus10026847.BGIv1.0 annot-version=v1.0 MTTRNALFLFLFTLFHLLSLFVPSHSGFHSDELLVDDDELVLDSVQPVPQSSIPKPDHTSTPSPTPRRKSSDSDSDSKIQFTLEHAFGESDFVPAGTFSA RLKTSAHGSQTLTKLRFSRNALTDAEKENFKNLLEVDDFYKIRLPSNVLSPPGKDFVVSSVKARCLPRETLDEHFVIQTEGVNILAVNYGAPGACSYPRQ MKLPSKWLFNSYTVLKNTEQAPRTPVFIQDVLGGEEGEGEAAQLPERSWWAKYWMYLIPLGLIVMNAMTQAMNMPEEQAAGQAGGSQAAPAGAVARGPSS AARRR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G65270			unknown protein		Lus10026847 [exp]	0	1
AT5G58470		TAF15b	TBP-associated factor 15B (.1....		Lus10026388 [exp]	1.0	0.9081
AT4G22550			Phosphatidic acid phosphatase ...		Lus10004345 [exp]	1.4	0.8958
AT1G26910		RPL10B	ribosomal protein L10 B, Ribos...		Lus10012113 [exp]	3.0	0.8955
AT2G18040		PIN1AT	"peptidylprolyl cis/trans isom...		Lus10025967 [exp]	5.3	0.8576
AT2G45060			Uncharacterised conserved prot...		Lus10042878 [exp]	7.3	0.8749
AT5G45190			Cyclin family protein (.1.2)		Lus10038329 [exp]	9.4	0.8640
AT5G62440			Protein of unknown function (D...		Lus10002053 [exp]	11.4	0.8459
AT4G34700		CIB22, AtCIB22	B22 subunit of eukaryotic mito...		Lus10042049 [exp]	11.7	0.8741
AT4G36960			RNA-binding (RRM/RBD/RNP motif...		Lus10019341 [exp]	14.2	0.8420
AT4G00390	GeBP		DNA-binding storekeeper protei...		Lus10018859 [exp]	15.5	0.8469

Compare expression of checked genes

Lus10026847 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.