Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G15480 291 / 2e-93 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2) AT2G15490 291 / 4e-93 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT2G16890 290 / 9e-93 UDP-Glycosyltransferase superfamily protein (.1.2) AT1G10400 283 / 2e-90 UDP-Glycosyltransferase superfamily protein (.1) AT5G14860 281 / 2e-89 UDP-Glycosyltransferase superfamily protein (.1) AT2G36800 276 / 3e-87 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT3G53160 275 / 3e-87 UGT73C7 UDP-glucosyl transferase 73C7 (.1) AT2G36770 275 / 7e-87 UDP-Glycosyltransferase superfamily protein (.1) AT2G36780 273 / 4e-86 UDP-Glycosyltransferase superfamily protein (.1) AT4G34138 268 / 2e-84 UGT73B1 UDP-glucosyl transferase 73B1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026927 [exp] 777 / 0 AT2G15480 310 / 2e-100 UDP-glucosyl transferase 73B5 (.1.2) Lus10020124 [exp] 754 / 0 AT2G15490 301 / 4e-97 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10022222 [exp] 317 / 2e-103 AT5G14860 505 / 4e-177 UDP-Glycosyltransferase superfamily protein (.1) Lus10022221 [exp] 280 / 1e-88 AT2G16890 479 / 1e-166 UDP-Glycosyltransferase superfamily protein (.1.2) Lus10022220 [exp] 279 / 1e-88 AT2G16890 497 / 4e-174 UDP-Glycosyltransferase superfamily protein (.1.2) Lus10014079 [exp] 273 / 4e-86 AT4G34131 483 / 3e-168 UDP-glucosyl transferase 73B3 (.1) Lus10014084 [exp] 272 / 6e-86 AT2G15490 445 / 2e-153 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014437 [exp] 270 / 1e-84 AT2G36780 545 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10019835 [exp] 266 / 3e-83 AT2G15480 476 / 3e-165 UDP-glucosyl transferase 73B5 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G009000 [exp] 572 / 0 AT2G15490 323 / 6e-106 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.018G008900 [exp] 562 / 0 AT2G15490 312 / 1e-101 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.006G272600 [exp] 561 / 0 AT2G15490 300 / 1e-96 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.006G272500 [exp] 560 / 0 AT2G15490 318 / 1e-103 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.005G036100 [exp] 382 / 8e-129 AT2G15490 309 / 3e-100 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G348100 [exp] 292 / 6e-94 AT2G16890 521 / 0.0 UDP-Glycosyltransferase superfamily protein (.1.2) Potri.006G120600 [exp] 290 / 5e-93 AT3G53150 617 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.009G099032 [exp] 286 / 3e-91 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303000 [exp] 278 / 3e-88 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303700 [exp] 276 / 2e-87 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10026926 pacid=23142838 polypeptide=Lus10026926 locus=Lus10026926.g ID=Lus10026926.BGIv1.0 annot-version=v1.0 ATGTCGACCAACGACCGTGTAGTAATATTCCCATTCATGGCACAAGGCCACACTCTTCCTCTCCTAGACCTCGCCAAGGCACTCACCATCCACCACAATC TCAACGTCACAATAATCACTACTCCTTTCAACGCCAATTCAATCTCCGATTACATCTCTCCACTTCACTTCCCAACCATTTCCCTCTCCATAATCGAATT CCCGCCAATCGACGGCCTTCCAAAAGGAACGGAGAACACTTCCCAACTCCCGTCCATGCAAGACTTCTACGTCCCTTTCCTCCACGCCACCAAGAAACTC AAGCAGCCCTTCGAGCAAATCCTGGCCACTCATCATCCTCGACCTCTCTGCGTCATATCCGACTTTTTCCTCGGATGGACGCTAGATTCCTGCCGAGCGT TCGGGATCCCGCGCTTGGTCTTCCACGGCATGAGCGTCTGCTCCATGGCTATTAGTAAATCCCTATGGTGCGCCCCTCCGGAGCTGAAAATGATGATGAC GTCAGCGGATAAGAAACAGCCGTTGGATCTGCCCGACATGAAGCTTCCTTTCACTTTAACGGCTGCAGATGTTCCGGCAGAGGCTATGGCGCCCAACGCG AATGAAGAGGATCTGCTAGCTAAGTACATTGAGGAAGTCGGATGGGCCGATGCCAACAGCTGGGGGATAATAGTCAACAGCTTCCATGAGCTGGAGCTCA GCCATATTGAGCCTTTCGAGAAGTTCTATTTCAATGAGGCCAAGGCCTGGTGTTTGGGCCCAATCCTTTTGTCTCACCGAGTTGATCATGAGATGATCAA CCCGAATACAAATTCTTTGAGCCGGTGGCTTGACGAGCAAGTGGCTCCGGGTTCGGTGATTTACGTTTCTTTCGGGACCCAGGCCGACGTCTCGAGTGCT CAGCTCGATGAAGTGGCCCACGGGCTGGAGGAGTCCGGGTTCCGATTTGTCTGGGTGGTTCGGTCGAACTCGTGGACGATTCCCGAGGTTTTGGAAGAGA AAATAAAGGGAAAGGGGTTTATTGCCAAGGAGTGGGTGGATCAACGTCGAATTTTGGTGCATCGATCCGTAGGTGGGTTTCTGAGTCATTGCGGGTGGAA CTCAGTCTTGGAGAGCGTATCGGCTGGGGTGCCGATTTTGGCTTGGCCCATGATAGCCGAGCAGCCGCTGAACGCTAAGCTGATTGTGGATGGGCTTGGA GCCGGGCTCCGAATGGAGAAGCTGGAGGTCGTATGTGGTGGTGAGGGTGTCGTGTTTGATCGAGATACCATCTGCAAAGGTGTGAGGGAGCTCATGGGTA GTGAAAAGGGACGGCGGGCCAGGGAGAGAGCCCAGGCTTTGGGCCGTGTGGCTCACCGGGCCGTTCAAAGAGGCGGCTCATCAGATGAAACGATGAGTCG TTTGATTAGCGAGCTACGCCAGTGTTAG
AA sequence Show only first row Show all	>Lus10026926 pacid=23142838 polypeptide=Lus10026926 locus=Lus10026926.g ID=Lus10026926.BGIv1.0 annot-version=v1.0 MSTNDRVVIFPFMAQGHTLPLLDLAKALTIHHNLNVTIITTPFNANSISDYISPLHFPTISLSIIEFPPIDGLPKGTENTSQLPSMQDFYVPFLHATKKL KQPFEQILATHHPRPLCVISDFFLGWTLDSCRAFGIPRLVFHGMSVCSMAISKSLWCAPPELKMMMTSADKKQPLDLPDMKLPFTLTAADVPAEAMAPNA NEEDLLAKYIEEVGWADANSWGIIVNSFHELELSHIEPFEKFYFNEAKAWCLGPILLSHRVDHEMINPNTNSLSRWLDEQVAPGSVIYVSFGTQADVSSA QLDEVAHGLEESGFRFVWVVRSNSWTIPEVLEEKIKGKGFIAKEWVDQRRILVHRSVGGFLSHCGWNSVLESVSAGVPILAWPMIAEQPLNAKLIVDGLG AGLRMEKLEVVCGGEGVVFDRDTICKGVRELMGSEKGRRARERAQALGRVAHRAVQRGGSSDETMSRLISELRQC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G15480		UGT73B5	UDP-glucosyl transferase 73B5 ...		Lus10026926 [exp]	0	1
AT4G16295		SPH1	S-protein homologue 1 (.1)		Lus10029377 [exp]	2.2	0.9648
AT2G24610		ATCNGC14	cyclic nucleotide-gated channe...		Lus10020122 [exp]	3.5	0.9454
AT1G65450			HXXXD-type acyl-transferase fa...		Lus10029920 [exp]	4.5	0.9627
AT5G11730			Core-2/I-branching beta-1,6-N-...		Lus10034348 [exp]	5.5	0.9627
AT5G37060		ATCHX24	cation/H+ exchanger 24, ARABID...		Lus10031852 [exp]	6.3	0.9512
AT5G62280			Protein of unknown function (D...		Lus10006163 [exp]	6.4	0.7997
					Lus10038978 [exp]	6.9	0.9275
AT5G45670			GDSL-like Lipase/Acylhydrolase...		Lus10011999 [exp]	7.1	0.9468
AT5G23960		ATTPS21	terpene synthase 21 (.1.2)		Lus10008614 [exp]	7.7	0.9397
AT1G55520		ATTBP2, TBP2	A. THALIANA TATA BINDING PROTE...		Lus10017716 [exp]	8.2	0.8281

Compare expression of checked genes

Lus10026926 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.