Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G15480 308 / 4e-100 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2) AT2G15490 308 / 7e-100 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT2G16890 297 / 1e-95 UDP-Glycosyltransferase superfamily protein (.1.2) AT5G14860 289 / 2e-92 UDP-Glycosyltransferase superfamily protein (.1) AT2G36800 286 / 5e-91 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT1G10400 285 / 5e-91 UDP-Glycosyltransferase superfamily protein (.1) AT4G34131 285 / 8e-91 UGT73B3 UDP-glucosyl transferase 73B3 (.1) AT4G34138 283 / 6e-90 UGT73B1 UDP-glucosyl transferase 73B1 (.1) AT3G53160 282 / 8e-90 UGT73C7 UDP-glucosyl transferase 73C7 (.1) AT2G36770 276 / 2e-87 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020124 [exp] 885 / 0 AT2G15490 301 / 4e-97 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10026926 [exp] 793 / 0 AT2G15480 300 / 1e-96 UDP-glucosyl transferase 73B5 (.1.2) Lus10022222 [exp] 317 / 3e-103 AT5G14860 505 / 4e-177 UDP-Glycosyltransferase superfamily protein (.1) Lus10022220 [exp] 304 / 2e-98 AT2G16890 497 / 4e-174 UDP-Glycosyltransferase superfamily protein (.1.2) Lus10022221 [exp] 289 / 2e-92 AT2G16890 479 / 1e-166 UDP-Glycosyltransferase superfamily protein (.1.2) Lus10014084 [exp] 288 / 3e-92 AT2G15490 445 / 2e-153 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014086 [exp] 284 / 3e-90 AT2G15490 496 / 4e-173 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014079 [exp] 283 / 4e-90 AT4G34131 483 / 3e-168 UDP-glucosyl transferase 73B3 (.1) Lus10019831 [exp] 281 / 2e-89 AT2G15490 425 / 8e-146 UDP-glycosyltransferase 73B4 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G009000 [exp] 595 / 0 AT2G15490 323 / 6e-106 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.006G272500 [exp] 584 / 0 AT2G15490 318 / 1e-103 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.006G272600 [exp] 583 / 0 AT2G15490 300 / 1e-96 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.018G008900 [exp] 580 / 0 AT2G15490 312 / 1e-101 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.005G036100 [exp] 409 / 3e-139 AT2G15490 309 / 3e-100 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303000 [exp] 311 / 6e-101 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.009G099032 [exp] 311 / 7e-101 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G348100 [exp] 307 / 1e-99 AT2G16890 521 / 0.0 UDP-Glycosyltransferase superfamily protein (.1.2) Potri.009G098966 [exp] 307 / 2e-99 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G302300 [exp] 302 / 1e-97 AT4G34131 488 / 4e-170 UDP-glucosyl transferase 73B3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10026927 pacid=23142798 polypeptide=Lus10026927 locus=Lus10026927.g ID=Lus10026927.BGIv1.0 annot-version=v1.0 ATGTCGAACACAGAAACAAACGACCATGTAATAATATTCCCATTCATGGCACAAGGCCACACTCTCCCTCTCCTCGACCTAGCCAAGGCATTCACCATCC ACCACAATCTCAACGTCACGATAATCACTACTCCTTCCAACGCCAAATCAATCTCCGACTACATCTCTCCGATCCACTTCCCAACTATCTCCCTCTCCTT AATCCCATTCCCTCCGATCGACGGCCTTCCGAAAGGAGTAGAGAACACTTCCCAGCTCCCGTCCATGCAAGACTTCTACGTCCCTTTCCTCCACGCCACC AAGAAGCTCAAGCAACCCTTCGACCAAATCCTCGCCACTCACCATCCTCGCCCTCTCTGCGTGATCTCCGACTTCTTCCTCGGATGGACGCTCGATTCTT GTCGAGCGTTCGGGATCCCGCGCTTGGTTTTCCACGGCATGAGCGTCTGCTCCATGGCTATTAGTAAATACCTATGGTGTGCCCCTCCGGAGCTCAAAAT GATGATGACGTCAGCGGATAAGAAACAGCCGTTGGATCTGCCCAACATGAAGCTTCCTTTCACTTTAACGGCTGCAGATGTTCCCGCAGAGGTCATGGTC AACTCTAGTGCTGAAGAGGATCCGCTGGTTAAATACATAGAGGAAGTCGGGTGGGCTGATGCCAACAGCTGGGGGATTATAGTCAACAGCTTCCATGAGG TGGAGCTCAGCCATACTGAGTCGTTTGAGAAGTTTTATTTTAATGGGGCCAAGGCTTGGTGTTTGGGCCCACTCTTTCTGTGCGAGGGTAAAACGGGAAT AATAAATGCAAATGCAAATTCCTCGACGAGCTGGGAAGAGCTGAGCCGGTGGCTCGATGAGCAAGTGGCTCCTGGTTCGGTGATTTATGTTTCGTTCGGT TCCCAAGCCGATGTCTCGAGCTCTCAGCTCGACGAAGTGGCCTATGGGCTTGTGGCGTCTGGGTGTCGCTTTGTTTGGGTGGTCCGATCGAAGTCGTGGG TGGGTCCTGAAGGTTTAGAGGAGAAGATAAAAGGAAAAGGGTTGGTTGTGAGGGATTGGGTGGACCAACGTAGAATATTGGACCACCGGTCGGTAGGTGG GTTTCTGAGTCATTGCGGGTGGAACTCAATTTTAGAGAGTGTTTCGGCTGGGGTGCCGATTTTAGTTTGGCCGATGATGGCCGAACAGGCACTGAACGCC AAGCTGATCGTCGAAGGGCTGGGAGCCGGGTTGCGATTGGAGAAGAGTAAGGATGATAGTGTTAATATGCTCAAGCGAGAATCCATTTGTGAAGGTGTGA GGGAGCTTATGAGTGGTGGAAAAGGACGTCATGCTAGGGAAAGAGCTCAAGCTTTGGGTCGTGTGGCTCATAAGGCAGTGCAGAAAGGCGGCTCGTCTCA TGAAGCCATGAGTCGGTTGGTTAGCGAGTTGCGTCAATGA
AA sequence Show only first row Show all	>Lus10026927 pacid=23142798 polypeptide=Lus10026927 locus=Lus10026927.g ID=Lus10026927.BGIv1.0 annot-version=v1.0 MSNTETNDHVIIFPFMAQGHTLPLLDLAKAFTIHHNLNVTIITTPSNAKSISDYISPIHFPTISLSLIPFPPIDGLPKGVENTSQLPSMQDFYVPFLHAT KKLKQPFDQILATHHPRPLCVISDFFLGWTLDSCRAFGIPRLVFHGMSVCSMAISKYLWCAPPELKMMMTSADKKQPLDLPNMKLPFTLTAADVPAEVMV NSSAEEDPLVKYIEEVGWADANSWGIIVNSFHEVELSHTESFEKFYFNGAKAWCLGPLFLCEGKTGIINANANSSTSWEELSRWLDEQVAPGSVIYVSFG SQADVSSSQLDEVAYGLVASGCRFVWVVRSKSWVGPEGLEEKIKGKGLVVRDWVDQRRILDHRSVGGFLSHCGWNSILESVSAGVPILVWPMMAEQALNA KLIVEGLGAGLRLEKSKDDSVNMLKRESICEGVRELMSGGKGRHARERAQALGRVAHKAVQKGGSSHEAMSRLVSELRQ

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G15480		UGT73B5	UDP-glucosyl transferase 73B5 ...		Lus10026927 [exp]	0	1
					Lus10042511 [exp]	2.4	0.8737
AT3G04290		ATLTL1, LTL1	Li-tolerant lipase 1 (.1)		Lus10003106 [exp]	4.2	0.9004
AT1G11600		CYP77B1	"cytochrome P450, family 77, s...		Lus10018351 [exp]	6.2	0.8601
AT3G58100		PDCB5	plasmodesmata callose-binding ...		Lus10002193 [exp]	7.0	0.8341
AT1G55260			Bifunctional inhibitor/lipid-t...		Lus10042449 [exp]	7.4	0.8254
AT4G28780			GDSL-like Lipase/Acylhydrolase...		Lus10004770 [exp]	8.7	0.8546
AT5G05810		ATL43	RING/U-box superfamily protein...		Lus10023617 [exp]	8.7	0.7962
AT3G06460			GNS1/SUR4 membrane protein fam...		Lus10020825 [exp]	10.2	0.8441
AT3G26040			HXXXD-type acyl-transferase fa...		Lus10017468 [exp]	12.5	0.8413
AT3G26040			HXXXD-type acyl-transferase fa...		Lus10028814 [exp]	14.4	0.8298

Compare expression of checked genes

Lus10026927 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.