Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026969 pacid=23142919 polypeptide=Lus10026969 locus=Lus10026969.g ID=Lus10026969.BGIv1.0 annot-version=v1.0 ATGCAGCAACAGAATTCAAGAATACCTTATAATCAAGAACTCACGAAAGCAGGAAATTTCTGGATTTCGATCAAAGCTGCTCGCTCACCTGGAGAATCTC TGGGTGAGTTCGTGCAACCAAGACGCGCTTCGAACGAATCTCCGGGTGACGTCGATCAAGCAGTCACCAACAACTCTTGGAATCCAAAACCAGATTTCCT ACTAATCTCACAGTTCCCCGGCGGTGAGTTGAAGTCTCAAATTTGTGCGATGAAATCCTTAACTGGTATCCGTAGATCACGGACTTTGGGAATTCCGTCG AGGAAAAGAGGGTACGACGTAACGCTGACTGTGAGGTATGAATTCAGCTGCGGGAGAGGACTATGCCGGTGGAGTTGA
AA sequence Show only first row Show all	>Lus10026969 pacid=23142919 polypeptide=Lus10026969 locus=Lus10026969.g ID=Lus10026969.BGIv1.0 annot-version=v1.0 MQQQNSRIPYNQELTKAGNFWISIKAARSPGESLGEFVQPRRASNESPGDVDQAVTNNSWNPKPDFLLISQFPGGELKSQICAMKSLTGIRRSRTLGIPS RKRGYDVTLTVRYEFSCGRGLCRWS

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10026969 [exp]	0	1
AT3G04690		ANX1	ANXUR1, Malectin/receptor-like...		Lus10016907 [exp]	2.8	0.7837
AT1G03390			HXXXD-type acyl-transferase fa...		Lus10033079 [exp]	8.1	0.7857
AT5G26250			Major facilitator superfamily ...		Lus10041212 [exp]	9.8	0.7927
AT5G48385			FRIGIDA-like protein (.1)		Lus10038038 [exp]	11.7	0.7377
AT3G07320			O-Glycosyl hydrolases family 1...		Lus10038211 [exp]	12.4	0.7655
AT1G71690			Protein of unknown function (D...		Lus10003512 [exp]	14.8	0.7842
					Lus10009357 [exp]	15.4	0.7576
AT2G34930			disease resistance family prot...		Lus10000236 [exp]	17.0	0.7490
AT4G27890			HSP20-like chaperones superfam...		Lus10027048 [exp]	17.4	0.7753
AT2G22560			Kinase interacting (KIP1-like)...		Lus10012730 [exp]	17.6	0.7656

Compare expression of checked genes

Lus10026969 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.