Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020176 [exp] 162 / 3e-50 AT5G35320 53 / 3e-08 unknown protein
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10026981 pacid=23142818 polypeptide=Lus10026981 locus=Lus10026981.g ID=Lus10026981.BGIv1.0 annot-version=v1.0 ATGAAGCGCAAGGAGTTCCAAGAAGTAGACGACGATTTCTCTTCGACTTCTCTCTACTCTCCTTCCACCAAGTCGAGAAGACTGGATTCAGAGCTGCTCC GCTCTTCGGAAGCGGCCCCTATGGTTGATGTCCAAGAGGCGATGATGGGAGAAGAATTGGAACCTCAAAACGTTGTTGGAGATTATATATACTGGCCTGG AAGTTCGATGGAAGCAAAATTAGCTGAGGGGAAACTGGCAGTAGATAAAAGCATCAGAGGATCCAATGACAATTTGGCAGTGGTTCCTTGGGTTGCTTCT CAACCACCAAAATTCTTAGCATCCTCAGGACAAGTCACAGATTCTTCAGAAGGGATGGAAGAAGCAGAAGAAATTGAGATGATGGACACAGATGAATCAG ATAGTAGGTCATTGAAAGATTTCGAGGCTGGTGGGATGGCATCAGAGATAGAAGTGCAACGTTGTCCGCAGCCACAGCTTCCGCAGCAGTGCTTTGCGGC AGGAGTGATGCAAAATCCATCCACACCAGTATCTTGGTGA
AA sequence Show only first row Show all	>Lus10026981 pacid=23142818 polypeptide=Lus10026981 locus=Lus10026981.g ID=Lus10026981.BGIv1.0 annot-version=v1.0 MKRKEFQEVDDDFSSTSLYSPSTKSRRLDSELLRSSEAAPMVDVQEAMMGEELEPQNVVGDYIYWPGSSMEAKLAEGKLAVDKSIRGSNDNLAVVPWVAS QPPKFLASSGQVTDSSEGMEEAEEIEMMDTDESDSRSLKDFEAGGMASEIEVQRCPQPQLPQQCFAAGVMQNPSTPVSW

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G35320			unknown protein		Lus10026981 [exp]	0	1
AT5G02500		AtHsp70-1, AT-H...	HEAT SHOCK PROTEIN 70-1, ARABI...		Lus10023418 [exp]	6.4	0.9066
AT1G62740		Hop2	Hop2, stress-inducible protein...		Lus10028919 [exp]	7.3	0.9033
AT3G12050			Aha1 domain-containing protein...		Lus10017240 [exp]	9.2	0.8961
AT5G35320			unknown protein		Lus10020176 [exp]	10.8	0.8781
AT3G03310		ATLCAT3	ARABIDOPSIS LECITHIN:CHOLESTER...		Lus10026853 [exp]	11.0	0.8621
AT5G52640		AtHsp90-1, ATHS...	HEAT SHOCK PROTEIN 83, HEAT SH...		Lus10027517 [exp]	14.0	0.8926
AT4G25200		ATHSP23.6-MITO	mitochondrion-localized small ...		Lus10031154 [exp]	16.4	0.8849
AT3G10020			unknown protein		Lus10003372 [exp]	16.6	0.8925
AT1G62740		Hop2	Hop2, stress-inducible protein...		Lus10004336 [exp]	17.8	0.8909
AT5G52640		AtHsp90-1, ATHS...	HEAT SHOCK PROTEIN 83, HEAT SH...		Lus10027518 [exp]	19.1	0.8898

Compare expression of checked genes

Lus10026981 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.