Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G02600 573 / 0 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) AT2G44110 533 / 0 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2) AT4G24250 414 / 3e-141 ATMLO13, MLO13 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) AT2G33670 339 / 2e-111 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT1G42560 318 / 8e-104 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT2G17480 320 / 7e-103 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT2G17430 307 / 1e-98 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT2G39200 307 / 3e-98 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G61560 305 / 2e-97 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT3G45290 300 / 4e-96 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10008340 [exp] 942 / 0 AT4G02600 576 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10001336 [exp] 493 / 3e-171 AT4G02600 644 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10026276 [exp] 441 / 9e-151 AT4G24250 576 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Lus10030729 [exp] 334 / 2e-109 AT2G33670 628 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 335 / 2e-108 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10041410 [exp] 335 / 2e-108 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036519 [exp] 334 / 5e-108 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10022096 [exp] 328 / 9e-106 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10040388 [exp] 320 / 1e-102 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G146900 [exp] 621 / 0 AT4G02600 613 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.017G000800 [exp] 619 / 0 AT4G02600 640 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.017G000900 [exp] 615 / 0 AT4G02600 639 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.013G069900 [exp] 554 / 0 AT4G02600 720 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.001G078800 [exp] 431 / 2e-147 AT4G24250 549 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Potri.007G064200 [exp] 338 / 4e-110 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.008G041400 [exp] 329 / 2e-106 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.002G006700 [exp] 325 / 2e-105 AT2G33670 593 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Potri.010G220500 [exp] 326 / 3e-105 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.007G064300 [exp] 320 / 5e-103 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10027093 pacid=23151583 polypeptide=Lus10027093 locus=Lus10027093.g ID=Lus10027093.BGIv1.0 annot-version=v1.0 ATGTCGGAAGGAGGGACAACGTTGGAGTACACTCCGACATGGGTGGTCGCCTTAGTCTGCACATTCATCGTCGTCATCTCCCTCGCCGTCGAACGATTTC TTCATTTCCTCGGCAAGGCACTTGCTAAAGAGAAAAAACCAGAAGCCACTGTTCGAAGCCCTGCAGAAGATCAAAGAAGGATCAACTCCGTCTGCATTCC AGAACACTGGGCTCATCAATGGCTTCCTTGTTCCAAAGAAGACCAAGAAAAAGAAGCTTCAGAATCAGCAACTACTGCCCATTTCATGACCTTCTTCACC GGCGGCGGAGGCGGCCGCCGTCGGCTTCTGGCGGAATCTGCTGCCGGAAGCTGTAAAGAGGGGAAAGTACCGATACTGTCGACAACAGCATTACACCATT TGCACATATTCATATTCGTGCTGGCATGTGTCCATGTTGCTTTCTCTGCTCTAACTATTCTCTTTGGAAGTGCAAAGATTAGACAGTGGAAGCATTGGGA GGATTCTGTCTCCAAGAAGAACTATGATCCTGAAGCTGCGAAAAGCTCGAGAATTACCCACGTGCAGGAGCATGATTTCATAAAGAACCGGTTTCAGGGC ATGGGGAGGAGGTCTTACATTTTCGGTTTAGTGCATTCATTTTTCAAGCAATTCTATGGTTCTGTAAGCAAATCTGATTACATCACGTTGCGAGCTGGTT TCATCGGGACTCATTGCAAGGGGAATCCCCAGTTCAATTTCCACAAGTACATGATGCGAGCACTCGAGGCTGACTTTAAGAAAGTCGTCGGTATAAGTTG GTATCTGTGGATATTTGTGGTTATTTTCTTGTTGCTGAACGTGGCTGGATGGCATGCATACTTCTGGATTGCATTCGTTCCTTTCGTCCTTCTGCTAGCA GTTGGTACGAAGTTAGAGCACATCATAACACAGTTGGCTCATGAAGTAGCTGAGAAACACGTAGCAGTGACGGGGGATTTGGTGGTTCAGCCTTCAGATG AACACTTCTGGTTCAAGAAACCAAAGCTTGTTCTGTTCCTCATCCACATTATCCTGTTCCAGAACTCCTTCGAACTCGCGTTCATGTTCTTTATTTTGCT TCAATACAAGTTCGATTCCTGCATCATGGGGAAAGTTGGTTACATCATCCCCAGACTCATTATAGGAGTATTTGTACAGTTTGTCTGCAGCTACAGTACT CTTCCTCTCTACGCCCTTGTGACACAAATGGGAAGTTCATTCAAGAAGGCGGTATTTGATGAGCATGTTCAAGTGGGATTGGTTGGTTGGGCAAAGAACG CTAAGAAGAAAACAGTGCTAAGGAAGGCAGCTGCTAATGGCGGGTCTAGTCTAGTCGGCCACAAAGAGGACTCGTCTCACGCCGGGGCCTTCATCCAGCT GGCGAAAACGACATCTGAGGAGAGCAGCAGCAAGGGAGGAAGCGAGATTGTTGCGGACGATGACAGAACTCCAACCCGTGGGACTTGA
AA sequence Show only first row Show all	>Lus10027093 pacid=23151583 polypeptide=Lus10027093 locus=Lus10027093.g ID=Lus10027093.BGIv1.0 annot-version=v1.0 MSEGGTTLEYTPTWVVALVCTFIVVISLAVERFLHFLGKALAKEKKPEATVRSPAEDQRRINSVCIPEHWAHQWLPCSKEDQEKEASESATTAHFMTFFT GGGGGRRRLLAESAAGSCKEGKVPILSTTALHHLHIFIFVLACVHVAFSALTILFGSAKIRQWKHWEDSVSKKNYDPEAAKSSRITHVQEHDFIKNRFQG MGRRSYIFGLVHSFFKQFYGSVSKSDYITLRAGFIGTHCKGNPQFNFHKYMMRALEADFKKVVGISWYLWIFVVIFLLLNVAGWHAYFWIAFVPFVLLLA VGTKLEHIITQLAHEVAEKHVAVTGDLVVQPSDEHFWFKKPKLVLFLIHIILFQNSFELAFMFFILLQYKFDSCIMGKVGYIIPRLIIGVFVQFVCSYST LPLYALVTQMGSSFKKAVFDEHVQVGLVGWAKNAKKKTVLRKAAANGGSSLVGHKEDSSHAGAFIQLAKTTSEESSSKGGSEIVADDDRTPTRGT

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G02600		MLO1, ATMLO1	MILDEW RESISTANCE LOCUS O 1, S...		Lus10027093 [exp]	0	1
AT2G37195			unknown protein		Lus10026508 [exp]	1.0	0.9179
AT4G23740			Leucine-rich repeat protein ki...		Lus10039321 [exp]	4.2	0.9067
AT3G09740		ATSYP71, SYP71	syntaxin of plants 71 (.1)		Lus10015075 [exp]	6.3	0.8920
AT1G60170		EMB1220	embryo defective 1220, pre-mRN...		Lus10012997 [exp]	10.0	0.9066
AT4G33740			unknown protein		Lus10020507 [exp]	11.0	0.9113
AT3G47570			Leucine-rich repeat protein ki...		Lus10010199 [exp]	17.2	0.8923
AT5G04870		AK1, ATCPK1, CP...	calcium dependent protein kina...		Lus10008958 [exp]	18.4	0.9013
AT1G24530			Transducin/WD40 repeat-like su...		Lus10006460 [exp]	21.8	0.8868
					Lus10026715 [exp]	23.4	0.8911
AT5G57330			Galactose mutarotase-like supe...		Lus10020015 [exp]	24.2	0.8774

Compare expression of checked genes

Lus10027093 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.